rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development
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November 2014 |
Effects of short-interval reburns in the boreal forest on soil bacterial communities compared to long-interval reburns
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June 2022 |
Fine-scale heterogeneity in overstory composition contributes to heterogeneity of wildfire severity in southern boreal forest
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June 2011 |
Microbial biogeography: putting microorganisms on the map
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February 2006 |
Growth and death of bacteria and fungi underlie rainfall-induced carbon dioxide pulses from seasonally dried soil
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May 2014 |
Fundamentals of Microbial Community Resistance and Resilience
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January 2012 |
Fire modulates ecosystem functioning through the phylogenetic structure of soil bacterial communities
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February 2019 |
Sampling to differentiate between pulse and press perturbations
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January 1996 |
Decreases in average bacterial community rRNA operon copy number during succession
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November 2015 |
Intense forest wildfire sharply reduces mineral soil C and N: the first direct evidence
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November 2008 |
Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys
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December 2015 |
An Ordination of the Upland Forest Communities of Southern Wisconsin
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February 1957 |
Separating soil CO2 efflux into C-pool-specific decay rates via inverse analysis of soil incubation data
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January 2013 |
Post-fire vegetative dynamics as drivers of microbial community structure and function in forest soils
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December 2005 |
Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
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June 2013 |
ggplot2
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January 2016 |
Dynamics of microbial community composition and soil organic carbon mineralization in soil following addition of pyrogenic and fresh organic matter
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April 2016 |
Defining trait-based microbial strategies with consequences for soil carbon cycling under climate change
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September 2019 |
Stochastic Community Assembly: Does It Matter in Microbial Ecology?
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October 2017 |
Active microorganisms in soil: Critical review of estimation criteria and approaches
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December 2013 |
Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale
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June 2009 |
Success of post-fire plant recovery strategies varies with shifting fire seasonality
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June 2022 |
Initial succession after wildfire in dry boreal forests of northwestern North America
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May 2022 |
Soil moisture affects survival of microorganisms in heated chaparral soil
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January 1985 |
Soil bacterial and fungal response to wildfires in the Canadian boreal forest across a burn severity gradient
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November 2019 |
Trait-based patterns of microbial dynamics in dormancy potential and heterotrophic strategy: case studies of resource-based and post-press succession
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June 2018 |
The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks
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November 2013 |
Soil microbial communities alter allelopathic competition between Alliaria petiolata and a native species
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October 2009 |
California Indian Ethnomycology and Associated Forest Management
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March 2013 |
How does fire affect the nature and stability of soil organic nitrogen and carbon? A review
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March 2007 |
Boreal forest soil carbon: distribution, function and modelling
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February 2012 |
Dynamic Molecular Structure of Plant Biomass-Derived Black Carbon (Biochar)
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February 2010 |
Multiple rRNA operons are essential for efficient cell growth and sporulation as well as outgrowth in Bacillus subtilis
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November 2013 |
Plant-soil feedbacks contribute to an intransitive competitive network that promotes both genetic and species diversity
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October 2010 |
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
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January 2013 |
Recent changes in the fire regime across the North American boreal region—Spatial and temporal patterns of burning across Canada and Alaska
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January 2006 |
Nitrogen speciation and transformations in fire-derived organic matter
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May 2020 |
Standard and non-standard measurements of acidity and the bacterial ecology of northern temperate mineral soils
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September 2021 |
Dormancy dynamics and dispersal contribute to soil microbiome resilience
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March 2020 |
Fire, climate change, and forest resilience in interior AlaskaThis article is one of a selection of papers from The Dynamics of Change in Alaska's Boreal Forests: Resilience and Vulnerability in Response to Climate Warming.
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July 2010 |
Modeling microbial abundances and dysbiosis with beta-binomial regression
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March 2020 |
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
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April 2013 |
Belowground community responses to fire: meta-analysis reveals contrasting responses of soil microorganisms and mesofauna
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October 2018 |
A communal catalogue reveals Earth’s multiscale microbial diversity
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November 2017 |
Topoedaphic and Forest Controls on Post-Fire Vegetation Assemblies Are Modified by Fire History and Burn Severity in the Northwestern Canadian Boreal Forest
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March 2018 |
Exploiting rRNA operon copy number to investigate bacterial reproductive strategies
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September 2016 |
A simple pyrocosm for studying soil microbial response to fire reveals a rapid, massive response by Pyronema species
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March 2020 |
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
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November 2012 |
Mapping fire extent and burn severity in Alaskan tussock tundra: An analysis of the spectral response of tundra vegetation to wildland fire
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July 2013 |
Climate change impacts on future boreal fire regimes
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April 2013 |
Fire intensity, fire severity and burn severity: a brief review and suggested usage
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January 2009 |
An examination of a forest site which has exhibited the ash-bed effect
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January 1965 |
Evidence for the Existence of Three Primary Strategies in Plants and Its Relevance to Ecological and Evolutionary Theory
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November 1977 |
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
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July 2019 |
Testing ecological models: the meaning of validation
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November 1996 |
Relic DNA is abundant in soil and obscures estimates of soil microbial diversity
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December 2016 |
Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin
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May 2018 |
Wildfire-dependent changes in soil microbiome diversity and function
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August 2022 |
Resilience in soil bacterial communities of the boreal forest from one to five years after wildfire across a severity gradient
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September 2022 |
Impact of chars and readily available carbon on soil microbial respiration and microbial community composition in a dynamic incubation experiment
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December 2016 |
The Ecology of Fire
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April 1961 |
High‐severity wildfire leads to multi‐decadal impacts on soil biogeochemistry in mixed‐conifer forests
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February 2020 |
Resistance of Bacillus Endospores to Extreme Terrestrial and Extraterrestrial Environments
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September 2000 |
Inference-based accuracy of metagenome prediction tools varies across sample types and functional categories
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April 2020 |
Managing Forests and Fire in Changing Climates
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October 2013 |
Microbe-driven turnover offsets mineral-mediated storage of soil carbon under elevated CO2
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November 2014 |
Wildfire effects on diversity and composition in soil bacterial communities
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July 2020 |
Fire-regime changes in Canada over the last half century
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March 2019 |
Fire severity influences the response of soil microbes to a boreal forest fire
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February 2016 |
Wildland fire ash: Production, composition and eco-hydro-geomorphic effects
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March 2014 |
Global estimation of burned area using MODIS active fire observations
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January 2006 |
Pyrogenic organic matter effects on soil bacterial community composition
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February 2020 |
Perturbation Experiments in Community Ecology: Theory and Practice
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February 1984 |
FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
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April 2009 |
Predicting pyrogenic organic matter mineralization from its initial properties and implications for carbon management
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November 2013 |
The myth of the biological threshold: A review of biological responses to soil heating associated with wildland fire
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January 2019 |
Pyrogenic organic matter in soil: Its origin and occurrence, its chemistry and survival in soil environments
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October 2011 |
25 years of serving the community with ribosomal RNA gene reference databases and tools
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November 2017 |
UniFrac: a New Phylogenetic Method for Comparing Microbial Communities
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December 2005 |
Estimating the heat transfer to an organic soil surface during crown fire
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January 2015 |