FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
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journal
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April 2016 |
How do fungal partners affect the evolution and habitat preferences of mycoheterotrophic plants? A case study in Gastrodia
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journal
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February 2016 |
Metacoder: An R package for visualization and manipulation of community taxonomic diversity data
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journal
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February 2017 |
Dissimilar responses of fungal and bacterial communities to soil transplantation simulating abrupt climate changes
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journal
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April 2019 |
CONSTAX2: improved taxonomic classification of environmental DNA markers
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journal
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May 2021 |
Generalized procrustes analysis
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journal
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March 1975 |
Temporal turnover of the soil microbiome composition is guild‐specific
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journal
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September 2021 |
Global negative effects of nitrogen deposition on soil microbes
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journal
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March 2018 |
Crop Management Impacts the Soybean (Glycine max) Microbiome
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journal
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June 2020 |
Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA
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journal
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March 2015 |
Abundance-occupancy distributions to prioritize plant core microbiome membership
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journal
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June 2019 |
Switchgrass cropping systems affect soil carbon and nitrogen and microbial diversity and activity on marginal lands
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journal
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May 2022 |
Accelerated temporal turnover of the soil nematode community under alpine grassland degradation
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journal
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December 2022 |
Global patterns in endemicity and vulnerability of soil fungi
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journal
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September 2022 |
Lack of belowground mutualisms hinders Pinaceae invasions
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journal
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September 2009 |
The bacterial community inhabiting temperate deciduous forests is vertically stratified and undergoes seasonal dynamics
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journal
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August 2015 |
The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks
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journal
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November 2013 |
MissForest--non-parametric missing value imputation for mixed-type data
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journal
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October 2011 |
PROTEST: A PROcrustean Randomization TEST of community environment concordance
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journal
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January 1995 |
Applied Spatial Data Analysis with R
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book
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January 2013 |
Tracking of the activity of individual bacteria in temperate forest soils shows guild-specific responses to seasonality
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journal
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August 2019 |
Cellulosic biofuel contributions to a sustainable energy future: Choices and outcomes
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journal
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June 2017 |
A meta-analysis of global fungal distribution reveals climate-driven patterns
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journal
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November 2019 |
Seasonal variation in functional properties of microbial communities in beech forest soil
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journal
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May 2013 |
Microbial hotspots and hot moments in soil: Concept & review
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journal
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April 2015 |
Fitting Linear Mixed-Effects Models Using lme4
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journal
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January 2015 |
Search and clustering orders of magnitude faster than BLAST
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journal
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August 2010 |
Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development
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journal
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August 2015 |
Vertical and temporal variations of soil bacterial and archaeal communities in wheat-soybean rotation agroecosystem
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journal
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February 2022 |
Contrasting primary successional trajectories of fungi and bacteria in retreating glacier soils
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journal
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September 2013 |
lmerTest Package: Tests in Linear Mixed Effects Models
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journal
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January 2017 |
UNITE USEARCH/UTAX release for eukaryotes
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dataset
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January 2020 |
Island biogeography of soil bacteria and fungi: similar patterns, but different mechanisms
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journal
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April 2020 |
UPARSE: highly accurate OTU sequences from microbial amplicon reads
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journal
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August 2013 |
Moving pictures of the human microbiome
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journal
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January 2011 |
Century long fertilization reduces stochasticity controlling grassland microbial community succession
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journal
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December 2020 |
Indirect Effects of Nitrogen Amendments on Organic Substrate Quality Increase Enzymatic Activity Driving Decomposition in a Mesic Grassland
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journal
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December 2010 |
Dynamics of Soil Bacterial and Fungal Communities During the Secondary Succession Following Swidden Agriculture IN Lowland Forests
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journal
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June 2021 |
Long-term nitrogen fertilization decreases bacterial diversity and favors the growth of Actinobacteria and Proteobacteria in agro-ecosystems across the globe
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journal
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April 2018 |
Plant and Soil Drivers of Whole-Plant Microbiomes: Variation in Switchgrass Fungi from Coastal to Mountain Sites
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journal
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January 2021 |
Using generalized dissimilarity modelling to analyse and predict patterns of beta diversity in regional biodiversity assessment
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journal
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May 2007 |
Global diversity and geography of soil fungi
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journal
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November 2014 |
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
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journal
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December 2011 |
Long-term effects of mineral fertilizers on soil microorganisms – A review
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journal
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August 2014 |
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
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journal
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July 2019 |
Rates of weathering and chemical depletion in soils across a chronosequence of Lake Michigan sand dunes
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journal
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September 1998 |
Secret lifestyles of Neurospora crassa
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journal
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May 2014 |
Seasonal dynamics of soil microbial diversity and functions along elevations across the treeline
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journal
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November 2021 |
When mutualisms matter: Rhizobia effects on plant communities depend on host plant population and soil nitrogen availability
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journal
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March 2018 |
Nitrogen fertilization challenges the climate benefit of cellulosic biofuels
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journal
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June 2016 |
Global distribution of earthworm diversity
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journal
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October 2019 |
Associative nitrogen fixation (ANF) in switchgrass (Panicum virgatum) across a nitrogen input gradient
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journal
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June 2018 |
Burkholderia phytofirmans strain PsJN advanced development and altered leaf level physiology of switchgrass
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journal
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December 2015 |
Structure and function of the global topsoil microbiome
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journal
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August 2018 |
Long‐term stability of soil bacterial and fungal community structures revealed in their abundant and rare fractions
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journal
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July 2021 |
Much beyond Mantel: Bringing Procrustes Association Metric to the Plant and Soil Ecologist’s Toolbox
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journal
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June 2014 |
Host genotype controls ecological change in the leaf fungal microbiome
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journal
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August 2022 |
Global-scale patterns of assemblage structure of soil nematodes in relation to climate and ecosystem properties: Global-scale patterns of soil nematode assemblage structure
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journal
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April 2014 |
Sustainable bioenergy production from marginal lands in the US Midwest
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journal
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January 2013 |
Malassezia Fungi Are Specialized to Live on Skin and Associated with Dandruff, Eczema, and Other Skin Diseases
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journal
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June 2012 |
Seasonal, sub-seasonal and diurnal variation of soil bacterial community composition in a temperate deciduous forest
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journal
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January 2019 |
Managing Plant Microbiomes for Sustainable Biofuel Production
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journal
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January 2021 |
The diversity and biogeography of soil bacterial communities
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journal
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January 2006 |
SINTAX: a simple non-Bayesian taxonomy classifier for 16S and ITS sequences
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preprint
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September 2016 |
Soil Origin and Plant Genotype Modulate Switchgrass Aboveground Productivity and Root Microbiome Assembly
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journal
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April 2022 |
Perenniality and diversity drive output stability and resilience in a 26-year cropping systems experiment
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journal
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April 2021 |
Temporal dynamics of free‐living nitrogen fixation in the switchgrass rhizosphere
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journal
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September 2021 |
Spatio-temporal dynamics of soil bacterial communities as a function of Amazon forest phenology
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journal
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March 2018 |
Endemism and functional convergence across the North American soil mycobiome
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journal
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April 2014 |
Impacts of nitrogen addition on switchgrass root-associated diazotrophic community structure and function
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journal
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October 2020 |
Seasonal dynamics of fungal communities in a temperate oak forest soil
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journal
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September 2013 |
The interconnected rhizosphere: High network complexity dominates rhizosphere assemblages
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journal
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June 2016 |
Do bacterial and fungal communities assemble differently during primary succession?
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journal
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January 2014 |
The global soil community and its influence on biogeochemistry
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journal
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August 2019 |
Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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journal
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September 2021 |
Climate warming leads to divergent succession of grassland microbial communities
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journal
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August 2018 |