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Cohort-based learning for microbiome research community standards

Journal Article · · Nature Microbiology
 [1];  [2];  [2];  [3];  [4];  [5];  [6];  [7];  [8];  [9];  [10];  [11];  [12];  [2];  [6];  [13];  [14];  [15];  [16];  [17] more »;  [2];  [13];  [2] « less
  1. Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Lawrence Berkeley National Laboratory
  2. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
  3. Children’s Hospital of Philadelphia, Philadelphia, PA (United States)
  4. Colorado State Univ., Fort Collins, CO (United States)
  5. Pennsylvania State Univ., State College, PA (United States)
  6. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
  7. Univ. of California San Diego, La Jolla, CA (United States)
  8. Northern Arizona Univ., Flagstaff, AZ (United States)
  9. Oregon Health and Science Univ., Portland, OR (United States)
  10. U.S. Food and Drug Administration, Laurel, MD (United States)
  11. The Scripps Research Inst., La Jolla, CA (United States)
  12. Univ. of Wisconsin, Madison, WI (United States)
  13. Center for Scientific Collaboration and Community Engagement, Oakland, CA (United States)
  14. Woods Hole Oceanographic Institution, Falmouth, MA (United States); Univ. of Georgia, Athens, GA (United States)
  15. Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
  16. National Cancer Inst., Bethesda, MD (United States)
  17. U.S. Food and Drug Administration, College Park, MD (United States)
+ Show Author Affiliations
Microbiome data standards are key to enabling data reuse, yet awareness and community adoption continue to be significant barriers to their broad implementation. The National Microbiome Data Collaborative launched an Ambassador Program based around a community learning model to broaden foundational knowledge and technical skills regarding microbiome metadata standards and best practices in data stewardship.
Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1973386
Journal Information:
Nature Microbiology, Journal Name: Nature Microbiology Journal Issue: 5 Vol. 8; ISSN 2058-5276
Publisher:
Nature Publishing GroupCopyright Statement
Country of Publication:
United States
Language:
English

References (9)

NMDC_Ambassador_EventSurvey.xlsx dataset January 2023
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications journal May 2011
A multi-omic future for microbiome studies journal April 2016
The National Microbiome Data Collaborative: enabling microbiome science journal April 2020
The FAIR Guiding Principles for scientific data management and stewardship journal March 2016
Sharing Begins at Home: How Continuous and Ubiquitous FAIRness Can Enhance Research Productivity and Data Reuse journal July 2022
Metadata harmonization–Standards are the key for a better usage of omics data for integrative microbiome analysis journal June 2022
Building a local community of practice in scientific programming for life scientists journal November 2018
NMDC_Ambassador_EventSurvey.xlsx dataset January 2023

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Related Subjects

59 BASIC BIOLOGICAL SCIENCES
community-learning
microbiome
standards