Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

Integrating very-high-resolution UAS data and airborne imaging spectroscopy to map the fractional composition of Arctic plant functional types in Western Alaska

Journal Article · · Remote Sensing of Environment
 [1];  [2];  [3];  [4];  [5];  [3];  [5];  [1]
  1. Brookhaven National Lab. (BNL), Upton, NY (United States); Stony Brook Univ., NY (United States)
  2. Univ. of California, Merced, CA (United States)
  3. Univ. of Maine, Orono, ME (United States)
  4. Brookhaven National Lab. (BNL), Upton, NY (United States)
  5. California Institute of Technology (CalTech), Pasadena, CA (United States)

Widespread changes in vegetation cover and composition are driving strong impacts on Arctic ecosystem functioning and global climate feedbacks. An accurate characterization of tundra vegetation composition is required to understand how the Arctic will respond to future climate change. However, quantifying tundra vegetation composition over large areas is challenging as commonly-used satellite observations are too coarse, spatially and spectrally, to differentiate low-lying tundra vegetation types. Recent airborne and spaceborne imaging spectroscopy platforms provide better data to characterize vegetation composition. Yet, our ability to characterize vegetation composition with imaging spectroscopy remains largely unexplored in the Arctic, particularly due to a lack of ground observations needed to train and test classification models. To address this problem, we collected very-high-resolution (VHR, ~5 cm) unoccupied aerial system (UAS) imagery at three low-Arctic tundra sites located on the Seward Peninsula, western Alaska. In this paper, we examine the feasibility of integrating imagery from the UAS and the hyperspectral Airborne Visible/Infrared Imaging Spectrometer, Next Generation (AVIRIS-NG) airborne instrument to map the fractional composition of 12 key Arctic plant functional types (PFTs). To this end, we first mapped the 12 PFTs from our VHR UAS imagery using random forest classification. We then used these UAS-derived PFT maps as ground truth to develop partial least squares regression (PLSR) models to predict the fractional cover (FCover) of each PFT from AVIRIS-NG imagery. Further, we evaluated the performance of our PLSR models using reserved UAS samples, as well as by mapping PFT FCover and dominant PFT for large tundra landscapes. Our results show that 1) Arctic PFTs can be effectively mapped using VHR UAS imagery, with overall accuracy between 86% and 92%, 2) when the UAS mapped PFTs were used to inform PLSR scaling models, the FCover of the 12 PFTs could be effectively estimated from AVIRIS-NG imagery with a mean absolute error (MAE) <0.13, and 3) our PLSR models outperformed traditional, fully constrained least-squares (FCLS) linear mixture analysis and produced high-quality, spatially contiguous PFT FCover and PFT maps that captured vegetation spatial patterns with similar accuracy to those developed from UAS imagery. The developed PLSR models have the potential to be broadly applied for quantifying vegetation composition with AVIRIS-NG images to help monitor tundra vegetation dynamics and improve process-based modeling of tundra ecosystems.

Research Organization:
Brookhaven National Laboratory (BNL), Upton, NY (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER); National Aeronautics and Space Administration (NASA)
Grant/Contract Number:
SC0012704
OSTI ID:
1958558
Report Number(s):
BNL-223863-2023-JAAM
Journal Information:
Remote Sensing of Environment, Journal Name: Remote Sensing of Environment Vol. 286; ISSN 0034-4257
Publisher:
ElsevierCopyright Statement
Country of Publication:
United States
Language:
English

References (90)

Arctic terrestrial hydrology: A synthesis of processes, regional effects, and research challenges: Arctic Terrestrial Hydrology journal March 2016
Benchmarking historical CMIP5 plant functional types across the Upper Midwest and Northeastern United States journal February 2016
Plant community composition and species richness in the High Arctic tundra: From the present to the future journal October 2017
Effects of permafrost degradation on woody vegetation at arctic treeline on the Seward Peninsula, Alaska journal January 2003
Detecting and mapping vegetation distribution on the Antarctic Peninsula from remote sensing data journal October 2010
Spatial Heterogeneity in the Shrub Tundra Ecotone in the Mackenzie Delta Region, Northwest Territories: Implications for Arctic Environmental Change journal January 2010
Landscape Heterogeneity of Shrub Expansion in Arctic Alaska journal April 2012
Assessing Vegetation Function with Imaging Spectroscopy journal February 2019
Practical limits on hyperspectral vegetation discrimination in arid and semiarid environments journal August 2001
Biophysical and Biochemical Sources of Variability in Canopy Reflectance journal June 1998
Mapping Chaparral in the Santa Monica Mountains Using Multiple Endmember Spectral Mixture Models journal September 1998
PLS-regression: a basic tool of chemometrics journal October 2001
‘Structure-from-Motion’ photogrammetry: A low-cost, effective tool for geoscience applications journal December 2012
Land cover classification of finer resolution remote sensing data integrating temporal features from time series coarser resolution data journal July 2014
Improving the prediction of African savanna vegetation variables using time series of MODIS products journal September 2017
Endmember variability in Spectral Mixture Analysis: A review journal July 2011
Atmospheric correction for global mapping spectroscopy: ATREM advances for the HyspIRI preparatory campaign journal September 2015
Mapping spectrally similar urban materials at sub-pixel scales journal June 2017
Mapping foliar functional traits and their uncertainties across three years in a grassland experiment journal February 2019
Estimating fractional cover of tundra vegetation at multiple scales using unmanned aerial systems and optical satellite data journal April 2019
Remote sensing of terrestrial plant biodiversity journal September 2019
From local to regional: Functional diversity in differently managed alpine grasslands journal January 2020
A generalized regression-based unmixing model for mapping forest cover fractions throughout three decades of Landsat data journal April 2020
Disentangling fractional vegetation cover: Regression-based unmixing of simulated spaceborne imaging spectroscopy data journal September 2020
Multi-scale integration of satellite remote sensing improves characterization of dry-season green-up in an Amazon tropical evergreen forest journal September 2020
NASA's surface biology and geology designated observable: A perspective on surface imaging algorithms journal May 2021
Spatial Heterogeneity of the Temporal Dynamics of Arctic Tundra Vegetation journal September 2018
Topographical Controls on Hillslope‐Scale Hydrology Drive Shrub Distributions on the Seward Peninsula, Alaska journal February 2021
Remote Sensing of Tundra Ecosystems Using High Spectral Resolution Reflectance: Opportunities and Challenges journal February 2022
A bidirectional reflectance model of the Earth's surface for the correction of remote sensing data journal January 1992
Increasing shrub abundance in the Arctic journal May 2001
Carbon loss from an unprecedented Arctic tundra wildfire journal July 2011
Climate change and the permafrost carbon feedback journal April 2015
Plot-scale evidence of tundra vegetation change and links to recent summer warming journal April 2012
Shifts in Arctic vegetation and associated feedbacks under climate change journal March 2013
Local-scale Arctic tundra heterogeneity affects regional-scale carbon dynamics journal October 2020
Complexity revealed in the greening of the Arctic journal January 2020
Patchy field sampling biases understanding of climate change impacts across the Arctic journal July 2018
Response of subarctic vegetation to transient climatic change on the Seward Peninsula in north-west Alaska journal June 2000
Hierarchical subdivision of Arctic tundra based on vegetation response to climate, parent material and topography journal December 2000
Mean Square Error of Prediction as a Criterion for Selecting Variables journal August 1971
A review on hyperspectral remote sensing for homogeneous and heterogeneous forest biodiversity assessment journal April 2010
An improved automated land cover updating approach by integrating with downscaled NDVI time series data journal January 2015
Mapping ultramafic complexes using airborne imaging spectroscopy and spaceborne data in Arctic regions with abundant lichen cover, a case study from the Niaqornarssuit complex in South West Greenland journal January 2020
Shrub expansion in tundra ecosystems: dynamics, impacts and research priorities journal October 2011
An overview of ABoVE airborne campaign data acquisitions and science opportunities journal July 2019
A narrow window of summer temperatures associated with shrub growth in Arctic Alaska journal October 2020
Drone data reveal heterogeneity in tundra greenness and phenology not captured by satellites journal November 2020
Arctic tundra shrubification: a review of mechanisms and impacts on ecosystem carbon balance journal April 2021
Multiscale mapping of plant functional groups and plant traits in the High Arctic using field spectroscopy, UAV imagery and Sentinel-2A data journal April 2021
20 cm resolution mapping of tundra vegetation communities provides an ecological baseline for important research areas in a changing Arctic environment journal October 2019
Remote sensing the biochemical composition of a slash pine canopy journal March 1997
An algorithm for the retrieval of albedo from space using semiempirical BRDF models journal March 2000
Fully constrained least squares linear spectral mixture analysis method for material quantification in hyperspectral imagery journal March 2001
Spectral unmixing journal January 2002
SCS+C: a modified Sun-canopy-sensor topographic correction in forested terrain journal September 2005
A Quantitative Analysis of Virtual Endmembers' Increased Impact on the Collinearity Effect in Spectral Unmixing journal August 2011
Constrained Least Squares Algorithms for Nonlinear Unmixing of Hyperspectral Imagery journal March 2015
How does spatial heterogeneity affect inter‐ and intraspecific growth patterns in tundra shrubs? journal October 2021
Remote sensing from unoccupied aerial systems: Opportunities to enhance Arctic plant ecology in a changing climate journal August 2022
Cross-validation strategies for data with temporal, spatial, hierarchical, or phylogenetic structure journal March 2017
Observing terrestrial ecosystems and the carbon cycle from space journal February 2015
Extensive land cover change across Arctic–Boreal Northwestern North America from disturbance and climate forcing journal September 2019
Remote sensing of plant functional types: Tansley review journal May 2010
Sources of variability in canopy reflectance and the convergent properties of plants: Tansley review journal November 2010
The Circumpolar Arctic vegetation map journal February 2005
Impact of shrub canopies on understorey vegetation in western Eurasian tundra: Impact of shrub canopies on understorey vegetation journal April 2011
The Alaska Arctic Vegetation Archive (AVA-AK) journal September 2016
UAV photogrammetry for mapping vegetation in the low-Arctic journal September 2016
A large airborne survey of Earth’s visible-infrared spectral dimensionality journal January 2017
Environmental Limits of Tall Shrubs in Alaska’s Arctic National Parks journal September 2015
Using Imaging Spectroscopy to Study Ecosystem Processes and Properties journal January 2004
Consequences of Treeline Shifts for the Diversity and Function of High Altitude Ecosystems journal November 2014
Imaging spectroscopy algorithms for mapping canopy foliar chemical and morphological traits and their uncertainties journal December 2015
Productivity and Nutrient Cycling of Alaskan Tundra: Enhancement by Flowing Soil Water journal June 1988
Alder Distribution and Expansion Across a Tundra Hillslope: Implications for Local N Cycling journal October 2019
Mapping Wild Leek through the Forest Canopy Using a UAV journal January 2018
Comparison of Methods for Modeling Fractional Cover Using Simulated Satellite Hyperspectral Imager Spectra journal September 2019
Incorporating the Plant Phenological Trajectory into Mangrove Species Mapping with Dense Time Series Sentinel-2 Imagery and the Google Earth Engine Platform journal October 2019
Monitoring Woody Cover Dynamics in Tropical Dry Forest Ecosystems Using Sentinel-2 Satellite Imagery journal April 2020
Ground-Based Hyperspectral Characterization of Alaska Tundra Vegetation along Environmental Gradients journal August 2013
Monitoring Natural Ecosystem and Ecological Gradients: Perspectives with EnMAP journal October 2015
Mapping Arctic Plant Functional Type Distributions in the Barrow Environmental Observatory Using WorldView-2 and LiDAR Datasets journal September 2016
Mapping Arctic Tundra Vegetation Communities Using Field Spectroscopy and Multispectral Satellite Data in North Alaska, USA journal November 2016
Regional Quantitative Cover Mapping of Tundra Plant Functional Types in Arctic Alaska journal October 2017
Plant co-existence patterns and High-Arctic vegetation composition in three common plant communities in north-east Greenland journal January 2014
Constraint of soil moisture on CO 2 efflux from tundra lichen, moss, and tussock in Council, Alaska, using a hierarchical Bayesian model journal January 2014
Arctic aquatic graminoid tundra responses to nutrient availability journal January 2021
Plant functional type classification for earth system models: results from the European Space Agency's Land Cover Climate Change Initiative journal January 2015
A distributed temperature profiling method for assessing spatial variability in ground temperatures in a discontinuous permafrost region of Alaska journal January 2019