A Ubiquitously Conserved Cyanobacterial Protein Phosphatase Essential for High Light Tolerance in a Fast-Growing Cyanobacterium

Walker, Patricia L.; Pakrasi, Himadri B.; Youssef, ed., Noha H.

doi:10.1128/spectrum.01008-22

A Ubiquitously Conserved Cyanobacterial Protein Phosphatase Essential for High Light Tolerance in a Fast-Growing Cyanobacterium

Journal Article · Wed Aug 31 00:00:00 EDT 2022 · Microbiology Spectrum

DOI:https://doi.org/10.1128/spectrum.01008-22· OSTI ID:1873197

^[1]; ^[1]; Youssef, ed., Noha H.

Department of Biology, Washington University, St. Louis, Missouri, USA

Cyanobacteria are a diverse group of photosynthetic prokaryotes. The cyanobacterium Synechococcus 2973 is a high light tolerant strain with industrial promise due to its fast growth under high light conditions and the availability of genetic modification tools.

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Research Organization:: Washington University, St. Louis, MO (United States)

Sponsoring Organization:: National Science Foundation (NSF); USDOE; USDOE Office of Science (SC), Basic Energy Sciences (BES); Washington University in St. Louis

Grant/Contract Number:: FG02-99ER20350

OSTI ID:: 1873197

Alternate ID(s):: OSTI ID: 1904569

Journal Information:: Microbiology Spectrum, Journal Name: Microbiology Spectrum Journal Issue: 4 Vol. 10; ISSN 2165-0497

Publisher:: American Society for MicrobiologyCopyright Statement

Country of Publication:: United States

Language:: English

References (48)

Photoinhibition of Photosystem II. Inactivation, protein damage and turnover Aro, Eva-Mari; Virgin, Ivar; Andersson, Bertil Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1143, Issue 2 https://doi.org/10.1016/0005-2728(93)90134-2	journal	July 1993
The GAF domain: an evolutionary link between diverse phototransducing proteins Aravind, L.; Ponting, Christopher P. Trends in Biochemical Sciences, Vol. 22, Issue 12 https://doi.org/10.1016/S0968-0004(97)01148-1	journal	December 1997
Diverse mechanisms for photoprotection in photosynthesis. Dynamic regulation of photosystem II excitation in response to rapid environmental change Derks, Allen; Schaven, Kristin; Bruce, Doug Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1847, Issue 4-5 https://doi.org/10.1016/j.bbabio.2015.02.008	journal	April 2015
Serine/Threonine Phosphatases: Mechanism through Structure Shi, Yigong Cell, Vol. 139, Issue 3 https://doi.org/10.1016/j.cell.2009.10.006	journal	October 2009
Circadian Control of Global Gene Expression by the Cyanobacterial Master Regulator RpaA Markson, Joseph S.; Piechura, Joseph R.; Puszynska, Anna M. Cell, Vol. 155, Issue 6 https://doi.org/10.1016/j.cell.2013.11.005	journal	December 2013
Transcriptome analysis of the cyanobacterium Synechocystis sp. PCC 6803 and mechanisms of photoinhibition tolerance under extreme high light conditions Ogawa, Kenichi; Yoshikawa, Katsunori; Matsuda, Fumio Journal of Bioscience and Bioengineering, Vol. 126, Issue 5 https://doi.org/10.1016/j.jbiosc.2018.05.015	journal	November 2018
Structure of the Phosphatase Domain of the Cell Fate Determinant SpoIIE from Bacillus subtilis Levdikov, Vladimir M.; Blagova, Elena V.; Rawlings, Andrea E. Journal of Molecular Biology, Vol. 415, Issue 2 https://doi.org/10.1016/j.jmb.2011.11.017	journal	January 2012
Light-optimized growth of cyanobacterial cultures: Growth phases and productivity of biomass and secreted molecules in light-limited batch growth Clark, Ryan L.; McGinley, Laura L.; Purdy, Hugh M. Metabolic Engineering, Vol. 47 https://doi.org/10.1016/j.ymben.2018.03.017	journal	May 2018
Phytochrome ancestry: sensors of bilins and light Montgomery, Beronda L.; Lagarias, J. Clark Trends in Plant Science, Vol. 7, Issue 8 https://doi.org/10.1016/s1360-1385(02)02304-x	journal	August 2002
Highly accurate protein structure prediction with AlphaFold Jumper, John; Evans, Richard; Pritzel, Alexander Nature https://doi.org/10.1038/s41586-021-03819-2	journal	July 2021
Driven progressive evolution of genome sequence complexity in Cyanobacteria Moya, Andrés; Oliver, José L.; Verdú, Miguel Scientific Reports, Vol. 10, Issue 1 https://doi.org/10.1038/s41598-020-76014-4	journal	November 2020
An evolutionarily conserved iron-sulfur cluster underlies redox sensory function of the Chloroplast Sensor Kinase Ibrahim, Iskander M.; Wu, Huan; Ezhov, Roman Communications Biology, Vol. 3, Issue 1 https://doi.org/10.1038/s42003-019-0728-4	journal	January 2020
Synechococcus elongatus UTEX 2973, a fast growing cyanobacterial chassis for biosynthesis using light and CO2 Yu, Jingjie; Liberton, Michelle; Cliften, Paul F. Scientific Reports, Vol. 5, Issue 1 https://doi.org/10.1038/srep08132	journal	January 2015
A novel high light-inducible carotenoid-binding protein complex in the thylakoid membranes of Synechocystis PCC 6803 Daddy, Soumana; Zhan, Jiao; Jantaro, Saowarath Scientific Reports, Vol. 5, Issue 1 https://doi.org/10.1038/srep09480	journal	March 2015
Minimal domain of bacterial phytochrome required for chromophore binding and fluorescence Rumyantsev, Konstantin A.; Shcherbakova, Daria M.; Zakharova, Natalia I. Scientific Reports, Vol. 5, Issue 1 https://doi.org/10.1038/srep18348	journal	December 2015
Cpf1 Is A Versatile Tool for CRISPR Genome Editing Across Diverse Species of Cyanobacteria Ungerer, Justin; Pakrasi, Himadri B. Scientific Reports, Vol. 6, Issue 1 https://doi.org/10.1038/srep39681	journal	December 2016
Genome evolution in cyanobacteria: The stable core and the variable shell Shi, T.; Falkowski, P. G. Proceedings of the National Academy of Sciences, Vol. 105, Issue 7 https://doi.org/10.1073/pnas.0711165105	journal	February 2008
Cyanobacterial daily life with Kai-based circadian and diurnal genome-wide transcriptional control in Synechococcus elongatus Ito, H.; Mutsuda, M.; Murayama, Y. Proceedings of the National Academy of Sciences, Vol. 106, Issue 33, p. 14168-14173 https://doi.org/10.1073/pnas.0902587106	journal	July 2009
Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing Shih, P. M.; Wu, D.; Latifi, A. Proceedings of the National Academy of Sciences, Vol. 110, Issue 3, p. 1053-1058 https://doi.org/10.1073/pnas.1217107110	journal	December 2012
Amino acid oxidation of the D1 and D2 proteins by oxygen radicals during photoinhibition of Photosystem II Kale, Ravindra; Hebert, Annette E.; Frankel, Laurie K. Proceedings of the National Academy of Sciences, Vol. 114, Issue 11 https://doi.org/10.1073/pnas.1618922114	journal	March 2017
Comparative genomics reveals the molecular determinants of rapid growth of the cyanobacterium Synechococcus elongatus UTEX 2973 Ungerer, Justin; Wendt, Kristen E.; Hendry, John I. Proceedings of the National Academy of Sciences, Vol. 115, Issue 50 https://doi.org/10.1073/pnas.1814912115	journal	November 2018
A Third Metal Is Required for Catalytic Activity of the Signal-transducing Protein Phosphatase M tPphA Su, Jiyong; Schlicker, Christine; Forchhammer, Karl Journal of Biological Chemistry, Vol. 286, Issue 15 https://doi.org/10.1074/jbc.M109.036467	journal	February 2011
Genomic Survey and Biochemical Analysis of Recombinant Candidate Cyanobacteriochromes Reveals Enrichment for Near UV/Violet Sensors in the Halotolerant and Alkaliphilic Cyanobacterium Microcoleus IPPAS B353 Cho, Sung Mi; Jeoung, Sae Chae; Song, Ji-Young Journal of Biological Chemistry, Vol. 290, Issue 47 https://doi.org/10.1074/jbc.M115.669150	journal	September 2015
Day and Night: Metabolic Profiles and Evolutionary Relationships of Six Axenic Non-Marine Cyanobacteria Will, Sabine Eva; Henke, Petra; Boedeker, Christian Genome Biology and Evolution, Vol. 11, Issue 1 https://doi.org/10.1093/gbe/evy275	journal	December 2018
An Improved General Amino Acid Replacement Matrix Le, S. Q.; Gascuel, O. Molecular Biology and Evolution, Vol. 25, Issue 7 https://doi.org/10.1093/molbev/msn067	journal	April 2008
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms Kumar, Sudhir; Stecher, Glen; Li, Michael Molecular Biology and Evolution, Vol. 35, Issue 6 https://doi.org/10.1093/molbev/msy096	journal	May 2018
Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation Letunic, Ivica; Bork, Peer Nucleic Acids Research, Vol. 49, Issue W1 https://doi.org/10.1093/nar/gkab301	journal	April 2021
Novel Putative Photoreceptor and Regulatory Genes Required for the Positive Phototactic Movement of the Unicellular Motile Cyanobacterium Synechocystis sp. PCC 6803 Yoshihara, Shizue; Suzuki, Fumiko; Fujita, Hironori Plant and Cell Physiology, Vol. 41, Issue 12 https://doi.org/10.1093/pcp/pce010	journal	December 2000
Evolution of the PPM-family protein phosphatases in Streptomyces: duplication of catalytic domain and lateral recruitment of additional sensory domains Zhang, Weiwen; Shi, Liang Microbiology, Vol. 150, Issue 12 https://doi.org/10.1099/mic.0.27480-0	journal	December 2004
Opposing pairs of serine protein kinases and phosphatases transmit signals of environmental stress to activate a bacterial transcription factor. Yang, X.; Kang, C. M.; Brody, M. S. Genes & Development, Vol. 10, Issue 18 https://doi.org/10.1101/gad.10.18.2265	journal	September 1996
Systematic Analysis of the Relation of Electron Transport and ATP Synthesis to the Photodamage and Repair of Photosystem II in Synechocystis Allakhverdiev, Suleyman I.; Nishiyama, Yoshitaka; Takahashi, Shunichi Plant Physiology, Vol. 137, Issue 1 https://doi.org/10.1104/pp.104.054478	journal	December 2004
The Anabaena sp. strain PCC 7120 asr1734 gene encodes a negative regulator of heterocyst development Wu, Xiaoqiang; Lee, Dong W.; Mella, Rodrigo A. Molecular Microbiology, Vol. 64, Issue 3 https://doi.org/10.1111/j.1365-2958.2007.05698.x	journal	May 2007
Bypass suppression analysis maps the signalling pathway within a multidomain protein: the RsbP energy stress phosphatase 2C from Bacillus subtilis Brody, Margaret S.; Stewart, Valley; Price, Chester W. Molecular Microbiology, Vol. 72, Issue 5 https://doi.org/10.1111/j.1365-2958.2009.06722.x	journal	June 2009
Analysis of the hli gene family in marine and freshwater cyanobacteria Bhaya, Devaki; Dufresne, Alexis; Vaulot, Daniel FEMS Microbiology Letters, Vol. 215, Issue 2 https://doi.org/10.1111/j.1574-6968.2002.tb11393.x	journal	October 2002
Oxidative stress in cyanobacteria Latifi, Amel; Ruiz, Marion; Zhang, Cheng-Cai FEMS Microbiology Reviews, Vol. 33, Issue 2 https://doi.org/10.1111/j.1574-6976.2008.00134.x	journal	March 2009
Engineering Natural Competence into the Fast-Growing Cyanobacterium Synechococcus elongatus Strain UTEX 2973 Wendt, Kristen E.; Walker, Patricia; Sengupta, Annesha Applied and Environmental Microbiology, Vol. 88, Issue 1 https://doi.org/10.1128/AEM.01882-21	journal	January 2022
Adjustments to Photosystem Stoichiometry and Electron Transfer Proteins Are Key to the Remarkably Fast Growth of the Cyanobacterium Synechococcus elongatus UTEX 2973 Ungerer, Justin; Lin, Po-Cheng; Chen, Hui-Yuan mBio, Vol. 9, Issue 1 https://doi.org/10.1128/mBio.02327-17	journal	February 2018
The RsbRST Stress Module in Bacteria: A Signalling System That May Interact with Different Output Modules Pané-Farré, Jan; Lewis, Richard J.; Stülke, Jörg Journal of Molecular Microbiology and Biotechnology, Vol. 9, Issue 2 https://doi.org/10.1159/000088837	journal	January 2005
Genome fluctuations in cyanobacteria reflect evolutionary, developmental and adaptive traits Larsson, John; Nylander, Johan AA; Bergman, Birgitta BMC Evolutionary Biology, Vol. 11, Issue 1 https://doi.org/10.1186/1471-2148-11-187	journal	June 2011
The primary transcriptome of the fast-growing cyanobacterium Synechococcus elongatus UTEX 2973 Tan, Xiaoming; Hou, Shengwei; Song, Kuo Biotechnology for Biofuels, Vol. 11, Issue 1 https://doi.org/10.1186/s13068-018-1215-8	journal	August 2018
Patterns and Implications of Gene Gain and Loss in the Evolution of Prochlorococcus Kettler, Gregory C.; Martiny, Adam C.; Huang, Katherine PLoS Genetics, Vol. 3, Issue 12 https://doi.org/10.1371/journal.pgen.0030231	journal	January 2007
"PP2C7s", Genes Most Highly Elaborated in Photosynthetic Organisms, Reveal the Bacterial Origin and Stepwise Evolution of PPM/PP2C Protein Phosphatases Kerk, David; Silver, Dylan; Uhrig, R. Glen PLOS ONE, Vol. 10, Issue 8 https://doi.org/10.1371/journal.pone.0132863	journal	August 2015
Diversity and Expression of Bacterial Metacaspases in an Aquatic Ecosystem Asplund-Samuelsson, Johannes; Sundh, John; Dupont, Chris L. Frontiers in Microbiology, Vol. 7 https://doi.org/10.3389/fmicb.2016.01043	journal	July 2016
The Stress-Responsive Alternative Sigma Factor SigB of Bacillus subtilis and Its Relatives: An Old Friend With New Functions Rodriguez Ayala, Facundo; Bartolini, Marco; Grau, Roberto Frontiers in Microbiology, Vol. 11 https://doi.org/10.3389/fmicb.2020.01761	journal	September 2020
Assessment of Protein Content and Phosphorylation Level in Synechocystis sp. PCC 6803 under Various Growth Conditions Using Quantitative Phosphoproteomic Analysis Toyoshima, Masakazu; Tokumaru, Yuma; Matsuda, Fumio Molecules, Vol. 25, Issue 16 https://doi.org/10.3390/molecules25163582	journal	August 2020
A widespread family of serine/threonine protein phosphatases shares a common regulatory switch with proteasomal proteases Bradshaw, Niels; Levdikov, Vladimir M.; Zimanyi, Christina M. eLife, Vol. 6 https://doi.org/10.7554/eLife.26111	journal	May 2017
Natural changes in light interact with circadian regulation at promoters to control gene expression in cyanobacteria Piechura, Joseph Robert; Amarnath, Kapil; O'Shea, Erin K. eLife, Vol. 6 https://doi.org/10.7554/eLife.32032	journal	December 2017
The structure of photosystem I from a high-light-tolerant cyanobacteria Dobson, Zachary; Ahad, Safa; Vanlandingham, Jackson eLife, Vol. 10 https://doi.org/10.7554/eLife.67518	journal	August 2021

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59 BASIC BIOLOGICAL SCIENCES
cyanobacteria
high light
serine/threonine phosphatases
stress tolerance

A Ubiquitously Conserved Cyanobacterial Protein Phosphatase Essential for High Light Tolerance in a Fast-Growing Cyanobacterium

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