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Draft Genome Sequence of Scheffersomyces spartinae ARV011, a Marine Yeast Isolate

Journal Article · · Microbiology Resource Announcements
DOI:https://doi.org/10.1128/MRA.00652-21· OSTI ID:1829919
 [1];  [2];  [3];  [1];
  1. Department of Microbiology and Immunology, University of Minnesota, Minneapolis, Minnesota, USA
  2. Department of Medicine, Division of Infectious Diseases, Washington University School of Medicine, St. Louis, Missouri, USA, Edison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine, St. Louis, Missouri, USA
  3. Department of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, USA

We report the draft genome sequence of Scheffersomyces spartinae ARV011, which was isolated from the Great Sippewissett Marsh in Falmouth, Massachusetts. Sequencing was performed using the Illumina NovaSeq 6000 platform, yielding 7,598,030 read pairs 250 bp in length. This resulted in a total draft genome size of 12,132,557 bp.

Sponsoring Organization:
USDOE
Grant/Contract Number:
SC0016127
OSTI ID:
1829919
Journal Information:
Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements Journal Issue: 45 Vol. 10; ISSN 2576-098X
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (11)

BUSCO: Assessing Genome Assembly and Annotation Completeness book January 2019
Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads book January 2013
Phylogenetic analysis of ascomycete yeasts that form coenzyme Q-9 and the proposal of the new genera Babjeviella, Meyerozyma, Millerozyma, Priceomyces, and Scheffersomyces journal January 2010
Analysis of the motion of vacuolar volutin granules in Saccharomyces cerevisiae journal September 2018
Basic local alignment search tool journal October 1990
Fast gapped-read alignment with Bowtie 2 journal March 2012
Trimmomatic: a flexible trimmer for Illumina sequence data journal April 2014
Bandage: interactive visualization of de novo genome assemblies: Fig. 1. journal June 2015
Microscale sulfur cycling in the phototrophic pink berry consortia of the Sippewissett Salt Marsh: Sulfur cycling in pink berries of the Sippewissett Marsh journal February 2014
Novel ITS1 Fungal Primers for Characterization of the Mycobiome journal December 2017
Three new Scheffersomyces species associated with insects and rotting wood in China journal August 2020

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