Complete Genome Sequence of Sulfurospirillum sp. Strain ACSDCE, an Anaerobic Bacterium That Respires Tetrachloroethene under Acidic pH Conditions

Yang, Yi; Huo, Leitao; Li, Xiuying; Yan, Jun; Löffler, Frank E.

doi:10.1128/mra.01360-20

Complete Genome Sequence of Sulfurospirillum sp. Strain ACS_DCE, an Anaerobic Bacterium That Respires Tetrachloroethene under Acidic pH Conditions

Journal Article · Thu Jan 14 00:00:00 EST 2021 · Microbiology Resource Announcements

DOI:https://doi.org/10.1128/mra.01360-20· OSTI ID:1819525

^[1]; Huo, Leitao ^[2]; Li, Xiuying ^[1]; ^[1]; ^[3]

Chinese Academy of Sciences (CAS), Shenyang, Liaoning (China)
Chinese Academy of Sciences (CAS), Shenyang, Liaoning (China); University of Chinese Academy of Sciences, Beijing (China)
Univ. of Tennessee, Knoxville, TN (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). Joint Institute for Biological Sciences (JIBS)

Sulfurospirillum sp. strain ACS_DCE couples growth with reductive dechlorination of tetrachloroethene to cis-1,2-dichloroethene at pH values as low as 5.5. The genome sequence of strain ACS_DCE consists of a circular 2,737,849-bp chromosome and a 39,868-bp plasmid and carries 2,737 protein-coding sequences, including two reductive dehalogenase genes.

Research Organization:: Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)

Sponsoring Organization:: Chinese Academy of Sciences (CAS); National Natural Science Foundation of China (NSFC); Strategic Environmental Research and Development Program (SERDP); USDOE

Grant/Contract Number:: AC05-00OR22725

OSTI ID:: 1819525

Journal Information:: Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements Journal Issue: 2 Vol. 10; ISSN 2576-098X

Publisher:: SSPA - American Society for MicrobiologyCopyright Statement

Country of Publication:: United States

Language:: English

References (12)

Optimal Treatment Zone Moves During Enhanced Reductive Dechlorination in Fractured Bedrock: Optimal Treatment Zone Moves During Enhanced Reductive Dechlorination Henterly, Richard W.; Harms, Willard D. Remediation Journal, Vol. 25, Issue 4 https://doi.org/10.1002/rem.21441	journal	September 2015
Isolation and characterization of Dehalospirillum multivorans gen. nov., sp. nov., a tetrachloroethene-utilizing, strictly anaerobic bacterium Scholz-Muramatsu, Heidrun; Neumann, Anke; Me�mer, Michael Archives of Microbiology, Vol. 163, Issue 1 https://doi.org/10.1007/BF00262203	journal	January 1995
Third Generation DNA Sequencing: Pacific Biosciences' Single Molecule Real Time Technology McCarthy, Alice Chemistry & Biology, Vol. 17, Issue 7 https://doi.org/10.1016/j.chembiol.2010.07.004	journal	July 2010
Organohalide Respiration with Chlorinated Ethenes under Low pH Conditions Yang, Yi; Cápiro, Natalie L.; Marcet, Tyler F. Environmental Science & Technology, Vol. 51, Issue 15 https://doi.org/10.1021/acs.est.7b01510	journal	July 2017
Assembly of long error-prone reads using de Bruijn graphs Lin, Yu; Yuan, Jeffrey; Kolmogorov, Mikhail Proceedings of the National Academy of Sciences, Vol. 113, Issue 52 https://doi.org/10.1073/pnas.1604560113	journal	December 2016
Resilience and recovery of Dehalococcoides mccartyi following low pH exposure Yang, Yi; Cápiro, Natalie L.; Yan, Jun FEMS Microbiology Ecology, Vol. 93, Issue 12 https://doi.org/10.1093/femsec/fix130	journal	October 2017
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update Jalili, Vahid; Afgan, Enis; Gu, Qiang Nucleic Acids Research, Vol. 48, Issue W1 https://doi.org/10.1093/nar/gkaa434	journal	June 2020
NCBI prokaryotic genome annotation pipeline Tatusova, Tatiana; DiCuccio, Michael; Badretdin, Azat Nucleic Acids Research, Vol. 44, Issue 14 https://doi.org/10.1093/nar/gkw569	journal	June 2016
Complete Genome Sequence of Sulfurospirillum Strain ACS _TCE , a Tetrachloroethene-Respiring Anaerobe Isolated from Contaminated Soil Huo, Leitao; Yang, Yi; Lv, Yan Microbiology Resource Announcements, Vol. 9, Issue 40 https://doi.org/10.1128/MRA.00941-20	journal	October 2020
Circlator: automated circularization of genome assemblies using long sequencing reads Hunt, Martin; Silva, Nishadi De; Otto, Thomas D. Genome Biology, Vol. 16, Issue 1 https://doi.org/10.1186/s13059-015-0849-0	journal	December 2015
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement Walker, Bruce J.; Abeel, Thomas; Shea, Terrance PLoS ONE, Vol. 9, Issue 11 https://doi.org/10.1371/journal.pone.0112963	journal	November 2014
Cutadapt removes adapter sequences from high-throughput sequencing reads Martin, Marcel EMBnet.journal, Vol. 17, Issue 1 https://doi.org/10.14806/ej.17.1.200	journal	May 2011

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