The Long-Range P3 Helix of the Tetrahymena Ribozyme Is Disrupted during Folding between the Native and Misfolded Conformations
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August 2013 |
Self-splicing RNA: Autoexcision and autocyclization of the ribosomal RNA intervening sequence of tetrahymena
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November 1982 |
The P9.1-P9.2 Peripheral Extension Helps Guide Folding of the Tetrahymena Ribozyme
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January 1996 |
Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 Å resolution
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December 2019 |
Ribozyme Structures and Mechanisms
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June 2001 |
Single-particle cryo-EM at atomic resolution
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October 2020 |
A chemical phylogeny of group I introns based upon interference mapping of a bacterial ribozyme 1 1Edited by D. Draper
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September 2000 |
Structure–Function Analysis from the Outside In: Long-Range Tertiary Contacts in RNA Exhibit Distinct Catalytic Roles
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September 2011 |
Extraordinarily slow binding of guanosine to the Tetrahymena group I ribozyme: Implications for RNA preorganization and function
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February 2003 |
A base triple in the Tetrahymena group I core affects the reaction equilibrium via a threshold effect
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November 2004 |
Probing the Role of a Secondary Structure Element at the 5‘- and 3‘-Splice Sites in Group I Intron Self-Splicing: The Tetrahymena L-16 Sca I Ribozyme Reveals a New Role of the G·U Pair in Self-Splicing
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March 2007 |
Structural Evidence for a Two-Metal-Ion Mechanism of Group I Intron Splicing
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September 2005 |
Catalytic activity is retained in the Tetrahymena group I intron despite removal of the large extension of element P5
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January 1989 |
Metal ion interaction with cosubstrate in self-splicing of group I introns
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February 1997 |
De novo computational RNA modeling into cryo-EM maps of large ribonucleoprotein complexes
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October 2018 |
Crystal structure of a self-splicing group I intron with both exons
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June 2004 |
Two conserved structural components, A-rich bulge and P4 XJ6/7 base-triples, in activating the group I ribozymes: Activation of the Group I ribozymes
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December 2002 |
An important base triple anchors the substrate helix recognition surface within the Tetrahymena ribozyme active site
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September 1999 |
CTFFIND4: Fast and accurate defocus estimation from electron micrographs
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November 2015 |
Assembly of core helices and rapid tertiary folding of a small bacterial group I ribozyme
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February 2003 |
Measurement of atom resolvability in cryo-EM maps with Q-scores
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February 2020 |
Stereochemical course of catalysis by the Tetrahymena ribozyme
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May 1989 |
Atomic-resolution protein structure determination by cryo-EM
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October 2020 |
Functional Identification of Catalytic Metal Ion Binding Sites within RNA
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August 2005 |
New tools for automated high-resolution cryo-EM structure determination in RELION-3
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November 2018 |
MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy
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February 2017 |
Ribozymes, the first 20 years
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November 2002 |
Crystal Structure of a Group I Ribozyme Domain: Principles of RNA Packing
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September 1996 |
Real-space refinement in PHENIX for cryo-EM and crystallography
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May 2018 |
UCSF Chimera?A visualization system for exploratory research and analysis
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January 2004 |
A relaxed active site after exon ligation by the group I intron
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April 2008 |
A magnesium ion core at the heart of a ribozyme domain
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July 1997 |
Three metal ions at the active site of the Tetrahymena group I ribozyme
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October 1999 |
Metal ion catalysis in the Tetrahymena ribozyme reaction
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January 1993 |
Crystal structure of a phage Twort group I ribozyme–product complex
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December 2004 |
Movement of the guide sequence during RNA catalysis by a group I ribozyme
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April 1993 |
The chemical basis of adenosine conservation throughout the Tetrahymena ribozyme
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May 1998 |
Optimal Determination of Particle Orientation, Absolute Hand, and Contrast Loss in Single-particle Electron Cryomicroscopy
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journal
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October 2003 |
Metals, Motifs, and Recognition in the Crystal Structure of a 5S rRNA Domain
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November 1997 |
The Noncoding RNA Revolution—Trashing Old Rules to Forge New Ones
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March 2014 |
New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the Tetrahymena thermophila ribozyme
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December 1996 |
Sequence-specific endoribonuclease activity of the Tetrahymena ribozyme: enhanced cleavage of certain oligonucleotide substrates that form mismatched ribozyme-substrate complexes
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December 1988 |
Ultraviolet Shadowing of RNA Can Cause Significant Chemical Damage in Seconds
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July 2012 |
A Preorganized Active Site in the Crystal Structure of the Tetrahymena Ribozyme
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October 1998 |
Joining the Two Domains of a Group I Ribozyme to Form the Catalytic Core
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February 1997 |
MolProbity : all-atom structure validation for macromolecular crystallography
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December 2009 |
The Paradoxical Behavior of a Highly Structured Misfolded Intermediate in RNA Folding
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October 2006 |
Features and development of Coot
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March 2010 |
The RNA Worlds in Context
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February 2011 |
In Crystallo Selection to Establish New RNA Crystal Contacts
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September 2018 |
A second catalytic metal ion in a group I ribozyme
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August 1997 |
A tertiary interaction in the Tetrahymena intron contributes to selection of the 5' splice site.
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May 1994 |
An unconventional origin of metal-ion rescue and inhibition in the Tetrahymena group I ribozyme reaction
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June 2000 |
Structural Basis of the Enhanced Stability of a Mutant Ribozyme Domain and a Detailed View of RNA–Solvent Interactions
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March 2001 |
Advances that facilitate the study of large RNA structure and dynamics by nuclear magnetic resonance spectroscopy
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April 2019 |
Accelerated cryo-EM-guided determination of three-dimensional RNA-only structures
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July 2020 |
Minimum secondary structure requirements for catalytic activity of a self-splicing group I intron
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July 1990 |
Modulation of individual steps in group I intron catalysis by a peripheral metal ion
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August 2007 |
Phylogenetic and genetic evidence for base-triples in the catalytic domain of group I introns
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October 1990 |
Resolving individual atoms of protein complex by cryo-electron microscopy
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November 2020 |
Probing the Dynamics of the P1 Helix within the Tetrahymena Group I Intron
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June 2009 |
New molecular engineering approaches for crystallographic studies of large RNAs
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June 2014 |
A general two-metal-ion mechanism for catalytic RNA.
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journal
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July 1993 |
Roles of Long-Range Tertiary Interactions in Limiting Dynamics of the Tetrahymena Group I Ribozyme
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April 2014 |
Metal-ion rescue revisited: Biochemical detection of site-bound metal ions important for RNA folding
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April 2012 |
In vitro genetic analysis of the Tetrahymena self-splicing intron
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September 1990 |
Defining the Catalytic Metal Ion Interactions in the Tetrahymena Ribozyme Reaction †
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May 2001 |
Functional Identification of Ligands for a Catalytic Metal Ion in Group I Introns
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June 2008 |
In vitro genetic analysis of the hinge region between helical elements P5-P4-P6 and P7-P3-P8 in the sunY group I self-splicing intron
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January 1994 |
Structure-function relationships of two closely related group IC3 intron ribozymes from Azoarcus and Synechococcus pre-tRNA
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September 2000 |
Convolutional neural networks for automated annotation of cellular cryo-electron tomograms
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August 2017 |
RNA Tertiary Structure Mediation by Adenosine Platforms
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September 1996 |