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Genome Sequences of 42 Bacteria Isolated from Sorghum bicolor Roots

Journal Article · · Microbiology Resource Announcements
DOI:https://doi.org/10.1128/mra.00736-20· OSTI ID:1817454
 [1];  [2];  [1];  [3];  [4];  [4];  [5];  [3];  [1];  [1]
  1. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
  2. Univ. of Tennessee, Knoxville, TN (United States)
  3. Univ. of Oklahoma, Norman, OK (United States)
  4. Kansas State Univ., Manhattan, KS (United States)
  5. USDOE Joint Genome Institute (JGI), Berkeley, CA (United States)
+ Show Author Affiliations

Forty-two bacterial strains were isolated from root samples of Sorghum bicolor. The strains spanned 17 genera, including Dechloromonas, Duganella, Dyella, Flavobacterium, Herbaspirillum, Lutibacter, Mucilaginibacter, Novosphingobium, Paraburkholderia, Pedobacter, Pleomorphomonas, Rhizobacter, Rhizobium, Rhizomicrobium, Rugamonas, Variovorax, and Xanthobacter. Their whole-genome sequences revealed diverse metabolic processes, including biological nitrogen fixation, in sorghum root microbiota.

Research Organization:
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES). Scientific User Facilities Division
Grant/Contract Number:
AC05-00OR22725; AC02-05CH11231
OSTI ID:
1817454
Journal Information:
Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements Journal Issue: 37 Vol. 9; ISSN 2576-098X
Publisher:
SSPA - American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

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Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions journal September 2010
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) journal October 2015
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Genome-Resolved Proteomic Stable Isotope Probing of Soil Microbial Communities Using 13CO2 and 13C-Methanol journal December 2019
Sorghum Growth Promotion by Paraburkholderia tropica and Herbaspirillum frisingense: Putative Mechanisms Revealed by Genomics and Metagenomics journal May 2020

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59 BASIC BIOLOGICAL SCIENCES