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Desulfatiglans anilini Initiates Degradation of Aniline With the Production of Phenylphosphoamidate and 4-Aminobenzoate as Intermediates Through Synthases and Carboxylases From Different Gene Clusters

Journal Article · · Frontiers in Microbiology
 [1];  [2];  [3];  [2];  [4]
  1. Universität Konstanz (Germany). Dept. of Biology; Konstanz Research School Chemical Biology (Germany); OSTI
  2. Universität Konstanz (Germany). Dept. of Biology; Konstanz Research School Chemical Biology (Germany)
  3. Konstanz Research School Chemical Biology (Germany); Universität Konstanz (Germany). Dept. of Chemistry
  4. Konstanz Research School Chemical Biology (Germany)

The anaerobic degradation of aniline was studied in the sulfate-reducing bacterium Desulfatiglans anilini. Our aim was to identify the genes and their proteins that are required for the initial activation of aniline as well as to characterize intermediates of this reaction. Aniline-induced genes were revealed by comparison of the proteomes of D. anilini grown with different substrates (aniline, 4- aminobenzoate, phenol, and benzoate). Most genes encoding proteins that were highly abundant in aniline- or 4-aminobenzoate-grown D. anilini cells but not in phenol- or benzoate-grown cells were located in the putative gene clusters ani (aniline degradation), hcr (4-hydroxybenzoyl-CoA reductase) and phe (phenol degradation). Of these putative gene clusters, only the phe gene cluster has been studied previously. Based on the differential proteome analysis, four candidate genes coding for kinase subunits and carboxylase subunits were suspected to be responsible for the initial conversion of aniline to 4-aminobenzoate. These genes were cloned and overproduced in E. coli. The recombinant proteins were obtained in inclusion bodies but could be refolded successfully. Two subunits of phenylphosphoamidate synthase and two carboxylase subunits converted aniline to 4-aminobenzoate with phenylphosphoamidate as intermediate under consumption of ATP. Only when both carboxylase subunits, one from gene cluster ani and the other from gene cluster phe, were combined, phenylphosphoamidate was converted to 4-aminobenzoate in vitro, with Mn2+, K+, and FMN as co-factors. Thus, aniline is degraded by the anaerobic bacterium D. anilini only by recruiting genes for the enzymatic machinery from different gene clusters. We conclude, that D. anilini carboxylates aniline to 4-aminobenzoate via phenylphosphoamidate as an energy rich intermediate analogous to the degradation of phenol to 4-hydroxybenzoate via phenylphosphate.

Research Organization:
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). National Energy Research Scientific Computing Center (NERSC)
Sponsoring Organization:
USDOE Office of Science (SC)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1817126
Journal Information:
Frontiers in Microbiology, Journal Name: Frontiers in Microbiology Vol. 11; ISSN 1664-302X
Publisher:
Frontiers Research FoundationCopyright Statement
Country of Publication:
United States
Language:
English

References (43)

Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250 journal January 1988
Divergent Effects of Chaperone Overexpression and Ethanol Supplementation on Inclusion Body Formation in RecombinantEscherichia coli journal December 1997
Anaerobic aniline degradation via reductive deamination of 4-aminobenzoyl-CoA in Desulfobacterium anilini journal January 1991
Anaerobic degradation of aniline and dihydroxybenzenes by newly isolated sulfate-reducing bacteria and description of Desulfobacterium anilini journal November 1989
The genome sequence of an anaerobic aromatic-degrading denitrifying bacterium, strain EbN1 journal November 2004
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding journal May 1976
Membrane-associated reactions in ubiquinone biosynthesis in Escherichia coli. 3-octaprenyl-4-hydroxybenzoate carboxy-lyase journal July 1976
The structure and the mechanism of action of pyruvate carboxylase journal March 1995
The UbiX-UbiD system: The biosynthesis and use of prenylated flavin (prFMN) journal October 2017
Mass Spectrometry-based Quantitative Proteomic Profiling of Human Pancreatic and Hepatic Stellate Cell Lines journal April 2013
Studies on transformation of Escherichia coli with plasmids journal June 1983
Regulation of adjacent yeast genes journal March 2000
Biodegradation of Aniline by a Newly Isolated Delftia sp. XYJ6 journal June 2009
Chemical and Catalytic Mechanisms of Carboxyl Transfer Reactions in Biotin-Dependent Enzymes journal February 2002
A Study of the Hydrolysis of Phosphonamides. I. Aromatic Phosphonamides 1 journal June 1958
Synthesis and Biological Activity of N -Sulfonylphosphoramidates:  Probing the Electrostatic Preferences of Alkaline Phosphatase journal August 2001
A Novel Efficient Synthesis of Dihydroxyacetone Phosphate and Bromoacetol Phosphate for Use in Enzymatic Aldol Syntheses journal August 1997
Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4 journal August 1970
Large clusters of co-expressed genes in the Drosophila genome journal December 2002
Microbial degradation of aromatic compounds — from one strategy to four journal October 2011
Arbuzov reaction of alkyl and silyl phosphites with halogens involving four- and five-co-ordinate intermediates journal January 1980
Clustal W and Clustal X version 2.0 journal September 2007
Building Phylogenetic Trees from Molecular Data with MEGA journal March 2013
Plasmid-Encoded Genes Specifying Aniline Oxidation from Acinetobacter sp. Strain YAA journal January 1997
Chromosome-encoded gene cluster for the metabolic pathway that converts aniline to TCA-cycle intermediates in Delftia tsuruhatensis AD9 journal October 2005
Coexpression of Neighboring Genes in Caenorhabditis Elegans Is Mostly Due to Operons and Duplicate Genes journal February 2003
Genomic Gene Clustering Analysis of Pathways in Eukaryotes journal April 2003
Characterization of strain HY99, a novel microorganism capable of aerobic and anaerobic degradation of aniline journal September 2000
Different strategies in anaerobic biodegradation of aromatic compounds: nitrate reducers versus strict anaerobes: Anaerobic degradation of aromatic compounds journal November 2011
Phenol Degradation in the Strictly Anaerobic Iron-Reducing Bacterium Geobacter metallireducens GS-15 journal April 2009
Function of a Glutamine Synthetase-Like Protein in Bacterial Aniline Oxidation via γ-Glutamylanilide journal October 2013
Phosphorylation of Phenol by Phenylphosphate Synthase: Role of Histidine Phosphate in Catalysis journal September 2006
Involvement of NADH:Acceptor Oxidoreductase and Butyryl Coenzyme A Dehydrogenase in Reversed Electron Transport during Syntrophic Butyrate Oxidation by Syntrophomonas wolfei journal July 2009
Nucleotide sequences and regulational analysis of genes involved in conversion of aniline to catechol in Pseudomonas putida UCC22(pTDN1) journal January 1997
Genes Involved in Anaerobic Metabolism of Phenol in the Bacterium Thauera aromatica journal October 2000
Phenylphosphate Carboxylase: a New C-C Lyase Involved in Anaerobic Phenol Metabolism in Thauera aromatica journal July 2004
Phenylphosphate Synthase: a New Phosphotransferase Catalyzing the First Step in Anaerobic Phenol Metabolism in Thauera aromatica journal December 2004
Quantitative Proteomic Analyses of Influenza Virus-Infected Cultured Human Lung Cells journal August 2010
The genome sequence of Geobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens journal January 2009
Enzymes involved in the anaerobic degradation of phenol by the sulfate-reducing bacterium Desulfatiglans anilini journal August 2018
Purification, Characterization, and Gene Analysis of Catechol 2,3-Dioxygenase from the Aniline-Assimilating Bacterium Pseudomonas Species AW-2 journal January 1998
Cloning and Functional Analysis of Aniline Dioxygenase Gene Cluster, from Frateuria Species ANA-18, That Metabolizes Aniline via an ortho -Cleavage Pathway of Catechol journal January 2003
Bacterial degradation of monocyclic aromatic amines journal August 2015