Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

Use of a non-homologous end-joining-deficient strain (delta-ku70) of the biocontrol fungus Trichoderma virens to investigate the function of the laccase gene lcc1 in sclerotia degradation

Journal Article · · Current Genetics
 [1];  [2];  [3];  [3];  [4];  [4];  [3];  [3]
  1. Univ. of Pisa (Italy). Faculty of Agriculture. Plant Pathology Section. Dept. of Tree Science, Entomology and Plant Pathology; Vienna Univ. of Technology (Austria). Inst. of Chemical Engineering. Research Area Gene Technology and Applied Biochemistry; OSTI
  2. Scuola Normale Superiore di Pisa (Italy)
  3. Vienna Univ. of Technology (Austria). Inst. of Chemical Engineering. Research Area Gene Technology and Applied Biochemistry
  4. Univ. of Pisa (Italy). Faculty of Agriculture. Plant Pathology Section. Dept. of Tree Science, Entomology and Plant Pathology

The aim of this study was to apply a generated Dtku70 strain with increased homologous recombination efficiency from the mycoparasitic fungus Trichoderma virens for studying the involvement of laccases in the degradation of sclerotia of plant pathogenic fungi. Inactivation of the non-homologous end-joining pathway has become a successful tool in filamentous fungi to overcome poor targeting efficiencies for genetic engineering. Here, we applied this principle to the biocontrol fungus T. virens, strain I10, by deleting its tku70 gene. This strain was subsequently used to delete the laccase gene lcc1, which we found to be expressed after interaction of T. virens with sclerotia of the plant pathogenic fungi Botrytis cinerea and Sclerotinia sclerotiorum. Lcc1 was strongly upregulated at early colonization of B. cinerea sclerotia and steadily induced during colonization of S. sclerotiorum sclerotia. The Dtku70Dlcc1 mutant was altered in its ability to degrade the sclerotia of B. cinerea and S. sclerotiorum. Interestingly, while the decaying ability for B. cinerea sclerotia was significantly decreased, that to degrade S. sclerotiorum sclerotia was even enhanced, suggesting the operation of different mechanisms in the mycoparasitism of these two types of sclerotia by the laccase LCC1.

Research Organization:
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). National Energy Research Scientific Computing Center (NERSC)
Sponsoring Organization:
USDOE Office of Science (SC); Austrian Science Fund
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1816636
Journal Information:
Current Genetics, Journal Name: Current Genetics Journal Issue: 1 Vol. 57; ISSN 0172-8083
Publisher:
Springer NatureCopyright Statement
Country of Publication:
United States
Language:
English

References (47)

Transformation of Trichoderma reesei based on hygromycin B resistance using homologous expression signals journal June 1994
Laccases: a never-ending story journal October 2009
Sequential gene deletions in Hypocrea jecorina using a single blaster cassette journal August 2005
Enhanced gene targeting frequency in ku70 and ku80 disruption mutants of Aspergillus sojae and Aspergillus oryzae journal February 2006
Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction journal April 1987
Gene targeting in filamentous fungi: the benefits of impaired repair journal February 2007
The fungal STRE-element-binding protein Seb1 is involved but not essential for glycerol dehydrogenase (gld1) gene expression and glycerol accumulation in Trichoderma atroviride during osmotic stress journal December 2004
Use of a nonhomologous end joining deficient strain (Δku70) of the ergot fungus Claviceps purpurea for identification of a nonribosomal peptide synthetase gene involved in ergotamine biosynthesis journal January 2008
Construction of an hdfA Penicillium chrysogenum strain impaired in non-homologous end-joining and analysis of its potential for functional analysis studies journal May 2009
Highly efficient generation of signal transduction knockout mutants using a fungal strain deficient in the mammalian ku70 ortholog journal August 2006
Gene targeting in a nonhomologous end joining deficient Hypocrea jecorina journal January 2009
Histopathological studies of sclerotia of phytopathogenic fungi parasitized by a GFP transformed Trichoderma virens antagonistic strain journal February 2006
Developmental biology of sclerotia journal October 1992
Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing journal September 2009
Melanin and fungi journal January 2003
Cryptococcus neoformans laccase catalyses melanin synthesis from both d- and l-DOPA journal December 2007
Efficient gene replacement and direct hyphal transformation in Sclerotinia sclerotiorum journal September 2008
The Survival of Fungal Sclerotia Under Adverse Environmental Conditions journal August 1971
A highly efficient gene-targeting system for Aspergillus parasiticus journal May 2008
Fungal laccases – occurrence and properties journal March 2006
Ku70 or Ku80 deficiencies in the fungus Botrytis cinerea facilitate targeting of genes that are hard to knock out in a wild-type context journal December 2008
Enhanced gene replacements in Ku80 disruption mutants of the dermatophyte, Trichophyton mentagrophytes journal September 2009
The akuB KU80 Mutant Deficient for Nonhomologous End Joining Is a Powerful Tool for Analyzing Pathogenicity in Aspergillus fumigatus journal January 2006
Gene Targeting in Aspergillus fumigatus by Homologous Recombination Is Facilitated in a Nonhomologous End- Joining-Deficient Genetic Background journal January 2006
Role of four major cellulases in triggering of cellulase gene expression by cellulose in Trichoderma reesei. journal January 1997
The Hypocrea jecorina (Trichoderma reesei) hypercellulolytic mutant RUT C30 lacks a 85 kb (29 gene-encoding) region of the wild-type genome journal January 2008
Presence of Sclerotinia Minor Jagger Antagonists in Soils from Different Mediterranean Areas. ii. Sclerotia Decaying Fungi journal October 1989
Melanin synthesis by Sclerotinia sclerotiorum journal May 2009
Lignin-modifying enzymes in filamentous basidiomycetes - ecological, functional and phylogenetic review journal February 2010
Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction journal April 1987
The DNA Damage Response in Filamentous Fungi journal April 2002
Cloning of the Trichoderma reesei pyrG gene and its use as a homologous marker for a high-frequency transformation system journal December 1990
Transformation of Trichoderma reesei based on hygromycin B resistance using homologous expression signals journal June 1994
Homologous recombination in the antibiotic producer Penicillium chrysogenum: strain ΔPcku70 shows up-regulation of genes from the HOG pathway journal August 2009
Developmental biology of sclerotia journal October 1992
Degradation of melanin or inhibition of its synthesis: are these a significant approach as a biological control of phytopathogenic fungi? journal February 2005
Highly efficient gene targeting in the Aspergillus niger kusA mutant journal March 2007
Interactions between the mycoparasite Pythium oligandrum and two types of sclerotia of plant-pathogenic fungi journal July 2005
From The Cover: Highly efficient gene replacements in Neurospora strains deficient for nonhomologous end-joining journal August 2004
Parasitism of Sclerotia of Sclerotium rolfsii by Trichoderma harzianum : Ultrastructural and Cytochemical Aspects of the Interaction journal January 1996
The Survival of Fungal Sclerotia Under Adverse Environmental Conditions journal August 1971
A highly efficient gene-targeting system for Aspergillus parasiticus journal May 2008
The β-N-acetylglucosaminidases NAG1 and NAG2 are essential for growth of Trichoderma atroviride on chitin: Chitin degradation in Trichoderma atroviride journal August 2009
The akuB KU80 Mutant Deficient for Nonhomologous End Joining Is a Powerful Tool for Analyzing Pathogenicity in Aspergillus fumigatus journal January 2006
Gene Targeting in Aspergillus fumigatus by Homologous Recombination Is Facilitated in a Nonhomologous End- Joining-Deficient Genetic Background journal January 2006
A Versatile and Efficient Gene-Targeting System for Aspergillus nidulans journal December 2005
Presence of Sclerotinia Minor Jagger Antagonists in Soils from Different Mediterranean Areas. ii. Sclerotia Decaying Fungi journal October 1989

Cited By (16)

I-SceI-mediated double-strand DNA breaks stimulate efficient gene targeting in the industrial fungus Trichoderma reesei journal August 2015
Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants journal November 2019
Structural and Phylogenetic Analysis of Laccases from Trichoderma: A Bioinformatic Approach journal January 2013
A High-Throughput Gene Disruption Methodology for the Entomopathogenic Fungus Metarhizium robertsii journal September 2014
High Level Secretion of Laccase (LccH) from a Newly Isolated White-Rot Basidiomycete, Hexagonia hirta MSF2 journal May 2016
In situ seed baiting to isolate germination-enhancing fungi for an epiphytic orchid, Dendrobium aphyllum (Orchidaceae) journal February 2014
Advances in targeting and heterologous expression of genes involved in the synthesis of fungal secondary metabolites journal January 2019
Self-assembly at Air/Water Interfaces and Carbohydrate Binding Properties of the Small Secreted Protein EPL1 from the fungus Trichoderma atroviride journal December 2012
Self versus non-self: fungal cell wall degradation in Trichoderma journal January 2012
Systematic gene deletions evidences that laccases are involved in several stages of wood degradation in the filamentous fungus Podospora anserina : Wood degradation by laccases in journal September 2013
Exploitation of genomics in fungicide research: current status and future perspectives: Genomics and fungicide research journal November 2012
The toolbox of Trichoderma spp. in the biocontrol of Botrytis cinerea disease: Trichoderma biocontrol of Botrytis cinerea disease journal October 2014
The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species journal February 2016
Comparative transcriptomics reveals different strategies of Trichoderma mycoparasitism journal January 2013
Sm2, a paralog of the Trichoderma cerato-platanin elicitor Sm1, is also highly important for plant protection conferred by the fungal-root interaction of Trichoderma with maize journal January 2015
Assessing the efficacy of CRISPR/Cas9 genome editing in the wheat pathogen Parastagonspora nodorum journal March 2020

Similar Records

Spray-induced gene silencing for disease control is dependent on the efficiency of pathogen RNA uptake
Journal Article · Sat Mar 27 00:00:00 EDT 2021 · Plant Biotechnology Journal · OSTI ID:1784294

Impact of Oxalic Acid Consumption and pH on the In Vitro Biological Control of Oxalogenic Phytopathogen Sclerotinia sclerotiorum
Journal Article · Sat Mar 01 23:00:00 EST 2025 · Journal of Fungi · OSTI ID:2526267

Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey
Journal Article · Sun Nov 29 23:00:00 EST 2009 · BMC Genomics, 10(Article Number: 567) · OSTI ID:972550