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Feline coronavirus drug inhibits the main protease of SARS-CoV-2 and blocks virus replication

Journal Article · · Nature Communications
 [1];  [2];  [3];  [4];  [3];  [5];  [5];  [3];  [3];  [5];  [4];  [6];  [3];  [4]
  1. Univ. of Alberta, Edmonton, AB (Canada). Dept. of Chemistry; OSTI
  2. Univ. of Alberta, Edmonton, AB (Canada). Dept. of Biochemistry. Membrane Protein Disease Research Group
  3. Univ. of Alberta, Edmonton, AB (Canada). Dept. of Chemistry
  4. Univ. of Alberta, Edmonton, AB (Canada). Dept. of Biochemistry. Membrane Protein Disease Research Group
  5. Univ. of Alberta, Edmonton, AB (Canada). Dept. of Medical Microbiology and Immunology and Li Ka Shing Institute of Virology
  6. Univ. of Alberta, Edmonton, AB (Canada). Dept. of Medical Microbiology and Immunology; Univ. of Alberta, Edmonton, AB (Canada). Li Ka Shing Institute of Virology
The main protease, Mpro (or 3CLpro) in SARS-CoV-2 is a viable drug target because of its essential role in the cleavage of the virus polypeptide. Feline infectious peritonitis, a fatal coronavirus infection in cats, was successfully treated previously with a prodrug GC376, a dipeptide-based protease inhibitor. Here, we show the prodrug and its parent GC373, are effective inhibitors of the Mpro from both SARS-CoV and SARS-CoV-2 with IC50 values in the nanomolar range. Crystal structures of SARS-CoV-2 Mpro with these inhibitors have a covalent modification of the nucleophilic Cys145. NMR analysis reveals that inhibition proceeds via reversible formation of a hemithioacetal. GC373 and GC376 are potent inhibitors of SARS-CoV-2 replication in cell culture. They are strong drug candidates for the treatment of human coronavirus infections because they have already been successful in animals. The work here lays the framework for their use in human trials for the treatment of COVID-19.
Research Organization:
Stanford Univ., CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES). Scientific User Facilities Division
Grant/Contract Number:
AC02-76SF00515
OSTI ID:
1816374
Journal Information:
Nature Communications, Journal Name: Nature Communications Journal Issue: 1 Vol. 11; ISSN 2041-1723
Publisher:
Nature Publishing GroupCopyright Statement
Country of Publication:
United States
Language:
English

References (31)

The establishment of reference sequence for SARS‐CoV‐2 and variation analysis journal March 2020
C‐terminal domain of SARS‐CoV main protease can form a 3D domain‐swapped dimer journal March 2009
Molecular basis of human immunodeficiency virus type 1 drug resistance: Overview and recent developments journal April 2013
Protease inhibitors broadly effective against feline, ferret and mink coronaviruses journal December 2018
High-Throughput Screening Identifies Inhibitors of the SARS Coronavirus Main Proteinase journal October 2004
Structure-guided design of potent and permeable inhibitors of MERS coronavirus 3CL protease that utilize a piperidine moiety as a novel design element journal April 2018
A Mechanistic View of Enzyme Inhibition and Peptide Hydrolysis in the Active Site of the SARS-CoV 3C-like Peptidase journal August 2007
Two adjacent mutations on the dimer interface of SARS coronavirus 3C-like protease cause different conformational changes in crystal structure journal June 2009
An Overview of Severe Acute Respiratory Syndrome–Coronavirus (SARS-CoV) 3CL Protease Inhibitors: Peptidomimetics and Small Molecule Chemotherapy journal February 2016
Peptide Aldehyde Inhibitors of Hepatitis A Virus 3C Proteinase journal January 1995
Cysteine Proteases and Their Inhibitors journal February 1997
Tipranavir journal December 2005
Emerging principles in protease-based drug discovery journal September 2010
Structure of Mpro from SARS-CoV-2 and discovery of its inhibitors journal April 2020
Compassionate Use of Remdesivir for Patients with Severe Covid-19 journal June 2020
Remdesivir is a direct-acting antiviral that inhibits RNA-dependent RNA polymerase from severe acute respiratory syndrome coronavirus 2 with high potency journal May 2020
Emergence of Novel Coronavirus and COVID-19: whether to stay or die out? journal March 2020
Web-Ice : integrated data collection and analysis for macromolecular crystallography journal January 2008
XDS journal January 2010
Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix journal October 2019
Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved α-ketoamide inhibitors journal March 2020
Structure-based design of antiviral drug candidates targeting the SARS-CoV-2 main protease journal April 2020
An orally bioavailable broad-spectrum antiviral inhibits SARS-CoV-2 in human airway epithelial cell cultures and multiple coronaviruses in mice journal April 2020
Broad-Spectrum Antivirals against 3C or 3C-Like Proteases of Picornaviruses, Noroviruses, and Coronaviruses journal August 2012
Coronaviruses Resistant to a 3C-Like Protease Inhibitor Are Attenuated for Replication and Pathogenesis, Revealing a Low Genetic Barrier but High Fitness Cost of Resistance journal August 2014
Mechanism for Controlling the Dimer-Monomer Switch and Coupling Dimerization to Catalysis of the Severe Acute Respiratory Syndrome Coronavirus 3C-Like Protease journal February 2008
Broad-Spectrum Inhibitors against 3C-Like Proteases of Feline Coronaviruses and Feline Caliciviruses journal February 2015
Efficacy of a 3C-like protease inhibitor in treating various forms of acquired feline infectious peritonitis journal May 2017
Reversal of the Progression of Fatal Coronavirus Infection in Cats by a Broad-Spectrum Coronavirus Protease Inhibitor journal March 2016
Efficacy of a 3C-like protease inhibitor in treating various forms of acquired feline infectious peritonitis collection January 2024
Antiviral Drug Discovery: Norovirus Proteases and Development of Inhibitors journal February 2019