Effect of Tillage Treatment on the Diversity of Soil Arbuscular Mycorrhizal Fungal and Soil Aggregate-Associated Carbon Content
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journal
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December 2018 |
FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
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journal
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April 2016 |
Cornuvesica: A little known mycophilic genus with a unique biology and unexpected new species
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journal
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July 2015 |
Why are some microbes more ubiquitous than others? Predicting the habitat breadth of soil bacteria
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journal
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April 2014 |
The GAAS Metagenomic Tool and Its Estimations of Viral and Microbial Average Genome Size in Four Major Biomes
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journal
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December 2009 |
Permutation tests for multi-factorial analysis of variance
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journal
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January 2003 |
Abundance-weighted phylogenetic diversity measures distinguish microbial community states and are robust to sampling depth
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journal
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January 2013 |
Effects of cropping systems upon the three-dimensional architecture of soil systems are modulated by texture
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journal
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December 2018 |
Fundamentals of Microbial Community Resistance and Resilience
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journal
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January 2012 |
Comparative Genomics of a Plant-Parasitic Nematode Endosymbiont Suggest a Role in Nutritional Symbiosis
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journal
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September 2015 |
Linking diversity, synchrony and stability in soil microbial communities
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journal
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February 2018 |
Starving the soil of plant inputs for 50 years reduces abundance but not diversity of soil bacterial communities
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journal
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September 2009 |
Historical contingency in species interactions: towards niche-based predictions
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journal
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November 2013 |
Trimmomatic: a flexible trimmer for Illumina sequence data
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journal
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April 2014 |
Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.
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journal
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July 2015 |
Strengths and Limitations of 16S rRNA Gene Amplicon Sequencing in Revealing Temporal Microbial Community Dynamics
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journal
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April 2014 |
Critical Evaluation of Two Primers Commonly Used for Amplification of Bacterial 16S rRNA Genes
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journal
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February 2008 |
Understanding and Enhancing Soil Biological Health: The Solution for Reversing Soil Degradation
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journal
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January 2015 |
Resistance, resilience, and redundancy in microbial communities
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journal
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August 2008 |
Transcriptomic insight into pathogenicity-associated factors of Conidiobolus obscurus , an obligate aphid-pathogenic fungus belonging to Entomopthoromycota: Transcriptomic analysis of C. obscurus
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journal
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February 2018 |
Scalable methods for analyzing and visualizing phylogenetic placement of metagenomic samples
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journal
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May 2019 |
Soil carbon debt of 12,000 years of human land use
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journal
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August 2017 |
Soil as an extended composite phenotype of the microbial metagenome
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journal
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June 2020 |
Conservation evaluation and phylogenetic diversity
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journal
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January 1992 |
Unifying Species Diversity, Phylogenetic Diversity, Functional Diversity, and Related Similarity and Differentiation Measures Through Hill Numbers
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journal
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November 2014 |
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
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journal
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January 2013 |
Impact of tillage system on arbuscular mycorrhiza fungal communities in the soil under Mediterranean conditions
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journal
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May 2012 |
Drought mediates the importance of stochastic community assembly
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journal
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October 2007 |
Distance-Based Tests for Homogeneity of Multivariate Dispersions
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journal
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October 2005 |
Quantifying and isolating stable soil organic carbon using long-term bare fallow experiments
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journal
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January 2010 |
Soil Microbiome Is More Heterogeneous in Organic Than in Conventional Farming System
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journal
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January 2017 |
Computational Improvements Reveal Great Bacterial Diversity and High Metal Toxicity in Soil
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journal
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August 2005 |
Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
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journal
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April 2016 |
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
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journal
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January 2014 |
The future of soils and land use in the UK: Soil systems for the provision of land-based ecosystem services
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journal
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December 2009 |
The effect of long-term soil management on the physical and biological resilience of a range of arable and grassland soils in England
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journal
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October 2009 |
‘ARMAN’ archaea depend on association with euryarchaeal host in culture and in situ
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journal
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July 2017 |
Empirical Testing of 16S rRNA Gene PCR Primer Pairs Reveals Variance in Target Specificity and Efficacy Not Suggested by In Silico Analysis
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journal
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May 2009 |
iNEXT: an R package for rarefaction and extrapolation of species diversity ( H ill numbers)
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journal
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August 2016 |
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
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journal
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October 2012 |
Community assembly: alternative stable states or alternative transient states?: Alternative transient states
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journal
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July 2011 |
Conidiobolus obscurus in arable soil: a method for extracting and counting azygospores
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journal
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January 1981 |
Edge Principal Components and Squash Clustering: Using the Special Structure of Phylogenetic Placement Data for Sample Comparison
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journal
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March 2013 |
Estimating prokaryotic diversity and its limits
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journal
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July 2002 |
Metagenomics uncovers gaps in amplicon-based detection of microbial diversity
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journal
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February 2016 |
Temporal variability in soil microbial communities across land-use types
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journal
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April 2013 |
The phylogenetic Kantorovich-Rubinstein metric for environmental sequence samples: Phylogenetic Kantorovich-Rubinstein Metric
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journal
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February 2012 |
Implications of streamlining theory for microbial ecology
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journal
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April 2014 |
A new Generation of Homology Search Tools Based on Probabilistic Inference
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conference
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March 2012 |
Robust estimation of microbial diversity in theory and in practice
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journal
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February 2013 |
Canonical Analysis of Principal Coordinates: a Useful Method of Constrained Ordination for Ecology
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journal
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February 2003 |
Trends between gene content and genome size in prokaryotic species with larger genomes
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journal
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February 2004 |
Mineralization and nitrification: Archaea dominate ammonia-oxidising communities in grassland soils
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journal
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April 2020 |
Changes in assembly processes in soil bacterial communities following a wildfire disturbance
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journal
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February 2013 |
Average Gene Length Is Highly Conserved in Prokaryotes and Eukaryotes and Diverges Only Between the Two Kingdoms
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journal
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April 2006 |
Bootstrap tests: how many bootstraps?
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journal
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January 2000 |
Isolation of an archaeon at the prokaryote–eukaryote interface
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journal
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January 2020 |
Global Biogeography and Quantitative Seasonal Dynamics of Gemmatimonadetes in Soil
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journal
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July 2011 |
Computation of the distribution of the maximum studentized range statistic with application to multiple significance testing of simple effects
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journal
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August 1988 |
rrnDB: documenting the number of rRNA and tRNA genes in bacteria and archaea
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journal
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January 2009 |
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
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journal
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October 2010 |
EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences
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journal
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September 2018 |
Soil resilience and recovery: rapid community responses to management changes
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journal
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September 2016 |
Microbial Communities Can Be Described by Metabolic Structure: A General Framework and Application to a Seasonally Variable, Depth-Stratified Microbial Community from the Coastal West Antarctic Peninsula
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journal
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August 2015 |
Fast and accurate average genome size and 16S rRNA gene average copy number computation in metagenomic data
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journal
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September 2019 |