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Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems

Journal Article · · Genome Announcements
 [1];  [2];  [3];  [4];  [5];  [6];  [7];  [7];  [8];  [8];  [9];  [10];  [11];  [12];  [13];  [13];  [13];  [14];  [14];  [15] more »;  [1] « less
  1. San Diego State University, Department of Biology, San Diego, California, USA
  2. Department of Subsurface Geobiological Analysis and Research, Japan Agency for Marine-Earth Science &, Technology (JAMSTEC), Yokosuka, Kanagawa, Japan
  3. Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kitashirakawa-Oiwake, Sakyo-ku, Japan
  4. Department of Biological Sciences, University of Calgary, Calgary, Alberta, Canada
  5. Division of Math &, Natural Sciences, Queens College in the City University of New York, Flushing, New York, USA
  6. Institute of Crop Science and Resource Conservation—Molecular Biology of the Rhizosphere, University of Bonn, Bonn, Germany
  7. Department of Microbiology, IWWR, Faculty of Science, Radboud University, Nijmegen, The Netherlands
  8. GK Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino, Russian Federation
  9. School of Environmental Sciences, University of East Anglia, Norwich Research Park, Norwich, United Kingdom
  10. Department of Civil and Environmental Engineering, The University of Michigan, Ann Arbor, Michigan, USA
  11. Department of Arctic and Marine Biology, UiT, The Arctic University of Norway, Tromsø, Norway
  12. Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada
  13. DOE Joint Genome Institute, Walnut Creek, California, USA
  14. Department of Microbiology, Genomics and the Environment, Université de Strasbourg, UMR 7156 CNRS, Strasbourg, France
  15. Roy J. Carver Department of Biochemistry, Biophysics and Molecular Biology, Ames, Iowa, USA
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ABSTRACT

The genome sequences of Methylobacter marinus A45, Methylobacter sp. strain BBA5.1, and Methylomarinum vadi IT-4 were obtained. These aerobic methanotrophs are typical members of coastal and hydrothermal vent marine ecosystems.

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
National Science Foundation (NSF); USDOE; USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1786406
Alternate ID(s):
OSTI ID: 1378992
Journal Information:
Genome Announcements, Journal Name: Genome Announcements Journal Issue: 1 Vol. 4; ISSN 2169-8287
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (9)

Isolation and characterization of marine methanotrophs journal January 1988
Methanotrophic bacteria occupy benthic microbial mats in shallow marine hydrocarbon seeps, Coal Oil Point, California: METHANOTROPHIC MICROBIAL MATS journal February 2008
Seafloor oxygen consumption fuelled by methane from cold seeps journal August 2013
Methylomarinum vadi gen. nov., sp. nov., a methanotroph isolated from two distinct marine environments journal June 2012
A novel family of functional operons encoding methane/ammonia monooxygenase-related proteins in gammaproteobacterial methanotrophs: Novel monooxygenase in Gamma-MOB journal February 2011
Real-Time DNA Sequencing from Single Polymerase Molecules journal January 2009
Methane and trichloroethylene oxidation by an estuarine methanotroph, Methylobacter sp. strain BB5.1. journal January 1997
Microbial Communities of Deep-Sea Methane Seeps at Hikurangi Continental Margin (New Zealand) journal September 2013
Solexa Ltd journal June 2004

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