Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

Structures of diverse poxin cGAMP nucleases reveal a widespread role for cGAS-STING evasion in host–pathogen conflict

Journal Article · · eLife
DOI:https://doi.org/10.7554/elife.59753· OSTI ID:1736294
 [1];  [2];  [1]
  1. Harvard Medical School, Boston, MA (United States); Dana-Farber Cancer Inst., Boston, MA (United States); Harvard Univ., Boston, MA (United States)
  2. Harvard Medical School, Boston, MA (United States); Dana-Farber Cancer Inst., Boston, MA (United States)

DNA viruses in the family Poxviridae encode poxin enzymes that degrade the immune second messenger 2'3'-cGAMP to inhibit cGAS-STING immunity in mammalian cells. The closest homologs of poxin exist in the genomes of insect viruses suggesting a key mechanism of cGAS-STING evasion may have evolved outside of mammalian biology. Here we use a biochemical and structural approach to discover a broad family of 369 poxins encoded in diverse viral and animal genomes and define a prominent role for 2'3'-cGAMP cleavage in metazoan host-pathogen conflict. Structures of insect poxins reveal unexpected homology to flavivirus proteases and enable identification of functional self-cleaving poxins in RNA-virus polyproteins. Our data suggest widespread 2'3'-cGAMP signaling in insect antiviral immunity and explain how a family of cGAS-STING evasion enzymes evolved from viral proteases through gain of secondary nuclease activity. Poxin acquisition by poxviruses demonstrates the importance of environmental connections in shaping evolution of mammalian pathogens.

Research Organization:
Argonne National Laboratory (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Organization:
USDOE; National Institutes of Health (NIH)
Grant/Contract Number:
AC02-06CH11357
OSTI ID:
1736294
Journal Information:
eLife, Journal Name: eLife Journal Issue: 2020 Vol. 9; ISSN 2050-084X
Publisher:
eLife Sciences Publications, Ltd.Copyright Statement
Country of Publication:
United States
Language:
ENGLISH

References (65)

RNA-virus proteases counteracting host innate immunity journal September 2017
The Schlafen family: complex roles in different cell types and virus replication: The characteristics and functions of Schlafen family journal June 2017
Serine peptidases: Classification, structure and function journal February 2008
Gentian Kobu-sho-associated virus: a tentative, novel double-stranded RNA virus that is relevant to gentian Kobu-sho syndrome journal December 2012
Genetic mapping of non-target-site resistance to a sulfonylurea herbicide (Envoke®) in Upland cotton (Gossypium hirsutum L.) journal September 2013
Isolation and characterization of immune-related genes from the fall webworm, Hyphantria cunea, using PCR-based differential display and subtractive cloning journal November 1998
Structure-Function Analysis of STING Activation by c[G(2′,5′)pA(3′,5′)p] and Targeting by Antiviral DMXAA journal August 2013
Structure-Guided Reprogramming of Human cGAS Dinucleotide Linkage Specificity journal August 2014
Structure of the Human cGAS–DNA Complex Reveals Enhanced Control of Immune Surveillance journal July 2018
The Innate Immune DNA Sensor cGAS Produces a Noncanonical Cyclic Dinucleotide that Activates Human STING journal May 2013
Analysis of Drosophila STING Reveals an Evolutionarily Conserved Antimicrobial Function journal June 2018
Inflammation-Induced, STING-Dependent Autophagy Restricts Zika Virus Infection in the Drosophila Brain journal July 2018
The Kinase IKKβ Regulates a STING- and NF-κB-Dependent Antiviral Response Pathway in Drosophila journal August 2018
Transfer of cGAMP into Bystander Cells via LRRC8 Volume-Regulated Anion Channels Augments STING-Mediated Interferon Responses and Anti-viral Immunity journal May 2020
Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life journal March 2004
The evolutionary biology of poxviruses journal January 2010
Cyclic GMP-AMP Containing Mixed Phosphodiester Linkages Is An Endogenous High-Affinity Ligand for STING journal July 2013
SLC19A1 Is an Importer of the Immunotransmitter cGAMP journal July 2019
cGAS and CD-NTase enzymes: structure, mechanism, and evolution journal December 2019
Polydnaviruses: From discovery to current insights journal May 2015
Structure-function insights into chikungunya virus capsid protein: Small molecules targeting capsid hydrophobic pocket journal February 2018
Serine Protease Mechanism and Specificity journal December 2002
cGAS produces a 2′-5′-linked cyclic dinucleotide second messenger that activates STING journal May 2013
Hydrolysis of 2′3′-cGAMP by ENPP1 and design of nonhydrolyzable analogs journal October 2014
The Phyre2 web portal for protein modeling, prediction and analysis journal May 2015
Rates of evolutionary change in viruses: patterns and determinants journal March 2008
Structural basis for SENP2 protease interactions with SUMO precursors and conjugated substrates journal November 2006
Viral and metazoan poxins are cGAMP-specific nucleases that restrict cGAS–STING signalling journal February 2019
Bacterial cGAS-like enzymes synthesize diverse nucleotide signals journal February 2019
Structural basis of STING binding with and phosphorylation by TBK1 journal March 2019
Autophagy induction via STING trafficking is a primordial function of the cGAS pathway journal March 2019
A conserved PLPLRT/SD motif of STING mediates the recruitment and activation of TBK1 journal May 2019
SLC19A1 transports immunoreactive cyclic dinucleotides journal September 2019
STING cyclic dinucleotide sensing originated in bacteria journal September 2020
SignalP 5.0 improves signal peptide predictions using deep neural networks journal February 2019
Extracellular cGAMP is a cancer-cell-produced immunotransmitter involved in radiation-induced anticancer immunity journal February 2020
Stimulator of interferon genes (STING) provides insect antiviral immunity by promoting Dredd caspase–mediated NF-κB activation journal June 2018
Benchmarking fold detection by DaliLite v.5 journal July 2019
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability journal January 2013
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs journal September 1997
InterProScan: protein domains identifier journal July 2005
PROMALS3D: a tool for multiple protein sequence and structure alignments journal February 2008
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0 journal March 2010
A novel virus from Macrosiphum euphorbiae with similarities to members of the family Flaviviridae journal May 2016
A novel cypovirus found in a betabaculovirus co-infection context contains a poxvirus immune nuclease (poxin)-related gene journal June 2020
Poxvirus DNA Replication journal July 2013
Coot model-building tools for molecular graphics journal November 2004
XDS journal January 2010
PHENIX: a comprehensive Python-based system for macromolecular structure solution journal January 2010
Reciprocal-space solvent flattening journal November 1999
A high‐quality chromosome‐level genome assembly of a generalist herbivore, Trichoplusia ni journal January 2019
Viral cGAMP nuclease reveals the essential role of DNA sensing in protection against acute lethal virus infection journal September 2020
Cyclic GMP-AMP Synthase Is a Cytosolic DNA Sensor That Activates the Type I Interferon Pathway journal December 2012
cGAS in action: Expanding roles in immunity and inflammation journal March 2019
A Diverse Range of Novel RNA Viruses in Geographically Distinct Honey Bee Populations journal May 2017
Transcriptional Responses of the Trichoplusia ni Midgut to Oral Infection by the Baculovirus Autographa californica Multiple Nucleopolyhedrovirus journal May 2019
Genomic and Proteomic Analyses Indicate that Banchine and Campoplegine Polydnaviruses Have Similar, if Not Identical, Viral Ancestors journal June 2015
Divergent Viruses Discovered in Arthropods and Vertebrates Revise the Evolutionary History of the Flaviviridae and Related Viruses journal October 2015
Global Organization and Proposed Megataxonomy of the Virus World journal March 2020
The genome sequence of Pseudoplusia includens single nucleopolyhedrovirus and an analysis of p26 gene evolution in the baculoviruses journal January 2015
Whole Genome Sequence of the Parasitoid Wasp Microplitis demolitor That Harbors an Endogenous Virus Mutualist journal July 2018
Virome Analysis of Aphid Populations That Infest the Barley Field: The Discovery of Two Novel Groups of Nege/Kita-Like Viruses and Other Novel RNA Viruses journal April 2020
Expanding Repertoire of Plant Positive-Strand RNA Virus Proteases journal January 2019
Deciphering the Virome of Culex vishnui Subgroup Mosquitoes, the Major Vectors of Japanese Encephalitis, in Japan journal February 2020
Gene Acquisition Convergence between Entomopoxviruses and Baculoviruses journal April 2015

Similar Records

Viral and metazoan poxins are cGAMP-specific nucleases that restrict cGAS-STING signalling
Journal Article · Tue Feb 05 23:00:00 EST 2019 · Nature (London) · OSTI ID:1497105

cGAS-like receptors sense RNA and control 3'2'-cGAMP signalling in Drosophila
Journal Article · Wed Jul 14 00:00:00 EDT 2021 · Nature (London) · OSTI ID:1820446

ENPP1’s regulation of extracellular cGAMP is a ubiquitous mechanism of attenuating STING signaling
Journal Article · Thu May 19 00:00:00 EDT 2022 · Proceedings of the National Academy of Sciences of the United States of America · OSTI ID:2471727

Related Subjects