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Title: Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7

Journal Article · · Scientific Reports
 [1];  [1];  [1];  [1];  [1];  [1];  [2];  [3];  [1]
  1. Univ. of Maryland, Rockville, MD (United States)
  2. Univ. of Texas, Galveston, TX (United States)
  3. Univ. of Maryland, Rockville, MD (United States); Univ. of Maryland, College Park, MD (United States)

The genome of Escherichia coli O157:H7 bacteriophage vB_EcoM_CBA120 encodes four distinct tailspike proteins (TSPs). The four TSPs, TSP1-4, attach to the phage baseplate forming a branched structure. We report the 1.9 Å resolution crystal structure of TSP2 (ORF211), the TSP that confers phage specificity towards E. coli O157:H7. The structure shows that the N-terminal 168 residues involved in TSPs complex assembly are disordered in the absence of partner proteins. The ensuing head domain contains only the first of two fold modules seen in other phage vB_EcoM_CBA120 TSPs. The catalytic site resides in a cleft at the interface between adjacent trimer subunits, where Asp506, Glu568, and Asp571 are located in close proximity. Replacement of Asp506 and Asp571 for alanine residues abolishes enzyme activity, thus identifying the acid/base catalytic machinery. However, activity remains intact when Asp506 and Asp571 are mutated into asparagine residues. Analysis of additional site-directed mutants in the background of the D506N:D571N mutant suggests engagement of an alternative catalytic apparatus comprising Glu568 and Tyr623. Finally, we demonstrate the catalytic role of two interacting glutamate residues of TSP1, located in a cleft between two trimer subunits, Glu456 and Glu483, underscoring the diversity of the catalytic apparatus employed by phage vB_EcoM_CBA120 TSPs.

Research Organization:
Argonne National Laboratory (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Organization:
National Institutes of Health (NIH); Argonne National Laboratory (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Grant/Contract Number:
R01GM110202
OSTI ID:
1701765
Journal Information:
Scientific Reports, Vol. 10; ISSN 2045-2322
Publisher:
Nature Publishing GroupCopyright Statement
Country of Publication:
United States
Language:
ENGLISH

References (24)

Structure and tailspike glycosidase machinery of ORF212 from E. coli O157:H7 phage CBA120 (TSP3) journal May 2019
An Intersubunit Active Site between Supercoiled Parallel β Helices in the Trimeric Tailspike Endorhamnosidase of Shigella flexneri Phage Sf6 journal May 2008
Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage journal April 1997
Dali server update journal April 2016
E. coli O157:H7 and Other Toxigenic Strains: The Curse of Global Food Distribution journal May 2012
Crystal Structure of ORF210 from E. coli O157:H1 Phage CBA120 (TSP1), a Putative Tailspike Protein journal March 2014
Features and development of Coot journal March 2010
Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120 journal September 2019
Bacteriophage P22 tailspike: structure of the complete protein and function of the interdomain linker journal April 2014
PHENIX: a comprehensive Python-based system for macromolecular structure solution journal January 2010
Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018) journal May 2018
Crystal structure of Escherichia coli phage HK620 tailspike: podoviral tailspike endoglycosidase modules are evolutionarily related journal July 2008
Diversity and Function of Phage Encoded Depolymerases journal January 2020
How good are my data and what is the resolution? journal June 2013
Enzymes and Mechanisms Employed by Tailed Bacteriophages to Breach the Bacterial Cell Barriers journal July 2018
Structure of the Receptor-Binding Protein of Bacteriophage Det7: a Podoviral Tail Spike in a Myovirus journal December 2007
Automating crystallographic structure solution and refinement of protein–ligand complexes journal December 2013
The Structures of Bacteriophages K1E and K1-5 Explain Processive Degradation of Polysaccharide Capsules and Evolution of New Host Specificities journal August 2007
Function of bacteriophage G7C esterase tailspike in host cell adsorption: Function of bacteriophage G7C esterase tailspike journal June 2017
Inference of Macromolecular Assemblies from Crystalline State journal September 2007
A Brief Overview of Escherichia coli O157:H7 and Its Plasmid O157 journal January 2010
Phaser crystallographic software journal July 2007
Thermostability of Temperature-sensitive Folding Mutants of the P22 Tailspike Protein journal June 1989
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter. journal July 1995