Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1AT)

Anderson, Iain; Göker, Markus; Nolan, Matt; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan-Fang; Tapia, Roxanne; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Huntemann, Marcel; Liolios, Konstantinos; Ivanova, Natalia; Pagani, Ioanna; Mavromatis, Konstantinos; Ovchinikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Brambilla, Evelyne-Marie; Huber, Harald; Yasawong, Montri; Rohde, Manfred; Spring, Stefan; Abt, Birte; Sikorski, Johannes; Wirth, Reinhard; Detter, John C.; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans-Peter; Lapidus, Alla

doi:10.4056/sigs.2014648

Title: Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A^T)

Journal Article · Fri Jul 01 00:00:00 EDT 2011 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.2014648· OSTI ID:1630573

Anderson, Iain ^[1]; Göker, Markus ^[2]; Nolan, Matt ^[1]; Lucas, Susan ^[1]; Hammon, Nancy ^[1]; Deshpande, Shweta ^[1]; Cheng, Jan-Fang ^[1]; Tapia, Roxanne ^[3]; Han, Cliff ^[3]; Goodwin, Lynne ^[3]; Pitluck, Sam ^[1]; Huntemann, Marcel ^[1]; Liolios, Konstantinos ^[1]; Ivanova, Natalia ^[1]; Pagani, Ioanna ^[1]; Mavromatis, Konstantinos ^[1]; Ovchinikova, Galina ^[1]; Pati, Amrita ^[1]; Chen, Amy ^[4]; Palaniappan, Krishna ^[4] more »

USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
2DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
German Collection of Microorganisms and Cell Cultures, Braunschweig (Germany)
Univ. of Regensburg (Germany)
Helmholtz Centre for Infection Research, Braunschweig (Germany)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of California, Davis, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of Queensland, Brisbane, QLD (Australia)

Pyrolobus fumarii Blöchl et al. 1997 is the type species of the genus Pyrolobus, which belongs to the crenarchaeal family Pyrodictiaceae. The species is a facultatively microaerophilic non-motile crenarchaeon. It is of interest because of its isolated phylogenetic location in the tree of life and because it is a hyperthermophilic chemolithoautotroph known as the primary producer of organic matter at deep-sea hydrothermal vents. P. fumarii exhibits currently the highest optimal growth temperature of all life forms on earth (106°C). This is the first completed genome sequence of a member of the genus Pyrolobus to be published and only the second genome sequence from a member of the family Pyrodictiaceae. Although Diversa Corporation announced the completion of sequencing of the P. fumarii genome on September 25, 2001, this sequence was never released to the public. The 1,843,267 bp long genome with its 1,986 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

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Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER); German Research Foundation (DFG)

Grant/Contract Number:: AC02-05CH11231; AC52-07NA27344; AC02-06NA25396; AC05-00OR22725; INST 599/1-2; SI 1352/1-2

OSTI ID:: 1630573

Journal Information:: Standards in Genomic Sciences, Vol. 4, Issue 3; ISSN 1944-3277

Publisher:: BioMed CentralCopyright Statement

Country of Publication:: United States

Language:: English

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Cited by: 9 works

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59 BASIC BIOLOGICAL SCIENCES
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Title: Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1AT)

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