Complete genome sequence of Bacteroides helcogenes type strain (P 36-108T)

Pati, Amrita; Gronow, Sabine; Zeytun, Ahmet; Lapidus, Alla; Nolan, Matt; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan-Fang; Tapia, Roxane; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mavromatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun-Juan; Jeffries, Cynthia D.; Detter, John C.; Brambilla, Evelyne; Rohde, Manfred; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans-Peter; Lucas, Susan

doi:10.4056/sigs.1513795

Title: Complete genome sequence of Bacteroides helcogenes type strain (P 36-108^T)

Journal Article · Tue Feb 22 00:00:00 EST 2011 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.1513795· OSTI ID:1630562

Pati, Amrita ^[1]; Gronow, Sabine ^[2]; Zeytun, Ahmet ^[3]; Lapidus, Alla ^[1]; Nolan, Matt ^[1]; Hammon, Nancy ^[1]; Deshpande, Shweta ^[1]; Cheng, Jan-Fang ^[1]; Tapia, Roxane ^[3]; Han, Cliff ^[3]; Goodwin, Lynne ^[3]; Pitluck, Sam ^[1]; Liolios, Konstantinos ^[1]; Pagani, Ioanna ^[1]; Ivanova, Natalia ^[1]; Mavromatis, Konstantinos ^[1]; Chen, Amy ^[4]; Palaniappan, Krishna ^[4]; Land, Miriam ^[5]; Hauser, Loren ^[5] more »

USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
German Collection of Microorganisms and Cell Cultures, Braunschweig (Germany)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Helmholtz Centre for Infection Research, Braunschweig (Germany)
German Collection of Microorganisms and Cell Cultures, Braunschweig (Germany)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of California, Davis, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of Queensland, Brisbane, QLD (Australia)

Bacteroides helcogenes Benno et al. 1983 is of interest because of its isolated phylogenetic location and, although it has been found in pig feces and is known to be pathogenic for pigs, occurrence of this bacterium is rare and it does not cause significant damage in intensive animal husbandry. The genome of B. helcogenes P 36-108T is already the fifth completed and published type strain genome from the genus Bacteroides in the family Bacteroidaceae. The 3,998,906 bp long genome with its 3,353 protein-coding and 83 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

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Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); Los Alamos National Laboratory (LANL), Los Alamos, NM (United States); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER); German Research Foundation (DFG)

Grant/Contract Number:: AC02-05CH11231; AC52-07NA27344; AC52-06NA25396; AC05-00OR22725

OSTI ID:: 1630562

Alternate ID(s):: OSTI ID: 1029229

Journal Information:: Standards in Genomic Sciences, Vol. 4, Issue 1; Related Information: https://link.springer.com/article/10.4056/sigs.1513795; ISSN 1944-3277

Publisher:: BioMed CentralCopyright Statement

Country of Publication:: United States

Language:: English

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Cited by: 6 works

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Cited By (3)

A genomic approach to the cryptic secondary metabolome of the anaerobic world Letzel, Anne-Catrin; Pidot, Sacha J.; Hertweck, Christian Nat. Prod. Rep., Vol. 30, Issue 3 https://doi.org/10.1039/c2np20103h	journal	January 2013
Genome-Based Taxonomic Classification of Bacteroidetes Hahnke, Richard L.; Meier-Kolthoff, Jan P.; García-López, Marina Frontiers in Microbiology, Vol. 7 https://doi.org/10.3389/fmicb.2016.02003	journal	December 2016
Exemplar Abstract for P 36-108 (=JCM 6297 =DSM 20613) https://doi.org/10.1601/ex.7955	dataset	August 2022

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Title: Complete genome sequence of Bacteroides helcogenes type strain (P 36-108T)

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