Complete genome sequence of Isosphaera pallida type strain (IS1BT)

Göker, Markus; Cleland, David; Saunders, Elizabeth; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan-Fang; Tapia, Roxane; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mavromatis, Konstantinos; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun-Juan; Jeffries, Cynthia D.; Detter, John C.; Beck, Brian; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans-Peter

doi:10.4056/sigs.1533840

Title: Complete genome sequence of Isosphaera pallida type strain (IS1B^T)

Journal Article · Fri Mar 04 00:00:00 EST 2011 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.1533840· OSTI ID:1630559

Göker, Markus ^[1]; Cleland, David ^[2]; Saunders, Elizabeth ^[3]; Lapidus, Alla ^[4]; Nolan, Matt ^[4]; Lucas, Susan ^[4]; Hammon, Nancy ^[4]; Deshpande, Shweta ^[4]; Cheng, Jan-Fang ^[4]; Tapia, Roxane ^[3]; Han, Cliff ^[3]; Goodwin, Lynne ^[3]; Pitluck, Sam ^[4]; Liolios, Konstantinos ^[4]; Pagani, Ioanna ^[4]; Ivanova, Natalia ^[4]; Mavromatis, Konstantinos ^[4]; Pati, Amrita ^[4]; Chen, Amy ^[5]; Palaniappan, Krishna ^[5] more »

German Collection of Microorganisms and Cell Cultures, Braunschweig (Germany)
American Type Culture Collection (ATCC), Manassas, VA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of California, Davis, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of Queensland, Brisbane, QLD (Australia)

Isosphaera pallida (ex Woronichin 1927) Giovannoni et al. 1995 is the type species of the genus Isosphaera. The species is of interest because it was the first heterotrophic bacterium known to be phototactic, and it occupies an isolated phylogenetic position within the Planctomycetaceae. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the genus Isosphaera and the third of a member of the family Planctomycetaceae. The 5,472,964 bp long chromosome and the 56,340 bp long plasmid with a total of 3,763 protein-coding and 60 RNA genes are part of the Genomic Encyclopedia of Bacteria and Archaea project.

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Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER)

Grant/Contract Number:: AC02-05CH11231; AC52-07NA27344; AC02-06NA25396; AC05-00OR22725

OSTI ID:: 1630559

Journal Information:: Standards in Genomic Sciences, Vol. 4, Issue 1; ISSN 1944-3277

Publisher:: BioMed CentralCopyright Statement

Country of Publication:: United States

Language:: English

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Cited by: 31 works

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From genome mining to phenotypic microarrays: Planctomycetes as source for novel bioactive molecules Jeske, Olga; Jogler, Mareike; Petersen, Jörn Antonie van Leeuwenhoek, Vol. 104, Issue 4 https://doi.org/10.1007/s10482-013-0007-1	journal	August 2013
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59 BASIC BIOLOGICAL SCIENCES
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Title: Complete genome sequence of Isosphaera pallida type strain (IS1BT)

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