Complete Genome Sequence of Curtobacterium sp. Strain MR_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts

Mariita, Richard M.; Bhatnagar, Srijak; Hanselmann, Kurt; Hossain, Mohammad J.; Korlach, Jonas; Boitano, Matthew; Roberts, Richard J.; Liles, Mark R.; Moss, Anthony G.; Leadbetter, Jared R.; Newman, Dianne K.; Dawson, Scott C.

doi:10.1128/genomeA.01504-15

Complete Genome Sequence of Curtobacterium sp. Strain MR_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts

Journal Article · Wed Dec 30 23:00:00 EST 2015 · Genome Announcements

DOI:https://doi.org/10.1128/genomeA.01504-15· OSTI ID:1630034

Mariita, Richard M. ^[1]; Bhatnagar, Srijak ^[2]; Hanselmann, Kurt ^[3]; Hossain, Mohammad J. ^[4]; Korlach, Jonas ^[5]; Boitano, Matthew ^[5]; Roberts, Richard J. ^[6]; Liles, Mark R. ^[4]; Moss, Anthony G. ^[4]; Leadbetter, Jared R. ^[7]; Newman, Dianne K. ^[8]; Dawson, Scott C. ^[9]

Auburn Univ., AL (United States). Dept. of Biological Sciences; DOE/OSTI
Univ. of California, Davis, CA (United States). Microbiology Graduate Group
Eidgenoessische Technische Hochschule, Zurich (Switzerland). Dept. of Earth Sciences
Auburn Univ., AL (United States). Dept. of Biological Sciences
Pacific Biosciences, Menlo Park, CA (United States)
New England BioLabs, Ipswich, MA (United States)
California Institute of Technology (CalTech), Pasadena, CA (United States). Linde Center for Global Environmental Science
California Institute of Technology (CalTech), Pasadena, CA (United States). Division of Biology and Biological Engineering; Howard Hughes Medical Inst., Pasadena, CA (United States); California Institute of Technology (CalTech), Pasadena, CA (United States). Division of Geological and Planetary Sciences
Univ. of California, Davis, CA (United States). Dept. of Microbiology and Molecular Genetics

Here, we present the 3,443,800-bp complete genome sequence of Curtobacterium sp. strain MR_MD2014 (phylum Actinobacteria). This strain was isolated from soil in Woods Hole, MA, as part of the 2014 Microbial Diversity Summer Program at the Marine Biological Laboratory in Woods Hole, MA.

Research Organization:: Univ. of California, Davis, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division

Grant/Contract Number:: FG02-85ER13361

OSTI ID:: 1630034

Journal Information:: Genome Announcements, Journal Name: Genome Announcements Journal Issue: 6 Vol. 3; ISSN 2169-8287

Publisher:: American Society for MicrobiologyCopyright Statement

Country of Publication:: United States

Language:: English

References (11)

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data Chin, Chen-Shan; Alexander, David H.; Marks, Patrick Nature Methods, Vol. 10, Issue 6 https://doi.org/10.1038/nmeth.2474	journal	May 2013
Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation Angiuoli, Samuel V.; Gussman, Aaron; Klimke, William OMICS: A Journal of Integrative Biology, Vol. 12, Issue 2 https://doi.org/10.1089/omi.2008.0017	journal	June 2008
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies Stamatakis, Alexandros Bioinformatics, Vol. 30, Issue 9 https://doi.org/10.1093/bioinformatics/btu033	journal	January 2014
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats Grissa, I.; Vergnaud, G.; Pourcel, C. Nucleic Acids Research, Vol. 35, Issue Web Server https://doi.org/10.1093/nar/gkm360	journal	May 2007
PHAST: A Fast Phage Search Tool Zhou, Y.; Liang, Y.; Lynch, K. H. Nucleic Acids Research, Vol. 39, Issue suppl https://doi.org/10.1093/nar/gkr485	journal	June 2011
REBASE—a database for DNA restriction and modification: enzymes, genes and genomes Roberts, Richard J.; Vincze, Tamas; Posfai, Janos Nucleic Acids Research, Vol. 43, Issue D1, p. D298-D299 https://doi.org/10.1093/nar/gku1046	journal	November 2014
Microbial species delineation using whole genome sequences Varghese, Neha J.; Mukherjee, Supratim; Ivanova, Natalia Nucleic Acids Research, Vol. 43, Issue 14 https://doi.org/10.1093/nar/gkv657	journal	July 2015
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes Parks, Donovan H.; Imelfort, Michael; Skennerton, Connor T. Genome Research, Vol. 25, Issue 7 https://doi.org/10.1101/gr.186072.114	journal	May 2015
Selective Isolation of Aerobic Actinomycetes El-Nakeeb, Moustafa A.; Lechevalier, Hubert A. Applied Microbiology, Vol. 11, Issue 2 https://doi.org/10.1128/AEM.11.2.75-77.1963	journal	January 1963
Selective Isolation of Aerobic Actinomycetes El-Nakeeb, Moustafa A.; Lechevalier, Hubert A. Applied Microbiology, Vol. 11, Issue 2 https://doi.org/10.1128/am.11.2.75-77.1963	journal	March 1963
Taxonomic Studies on Coryneform Bacteria Yamada, Kazuhiko; Komagata, Kazuo The Journal of General and Applied Microbiology, Vol. 18, Issue 6 https://doi.org/10.2323/jgam.18.417	journal	January 1972

Cited By (1)

High-Quality Draft Genome Sequence of Curtobacterium sp. Strain Ferrero Osdaghi, Ebrahim; Forero Serna, Natalia; Bolot, Stephanie Genome Announcements, Vol. 5, Issue 48 https://doi.org/10.1128/genomea.01378-17	journal	November 2017

Similar Records

Complete Genome Sequence of Streptomyces sp. Strain CCM_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts

Journal Article · Wed Dec 30 23:00:00 EST 2015 · Genome Announcements · OSTI ID:1629912

Complete genome sequence of Arthrobacter sp. strain FB24

Journal Article · Mon Sep 30 00:00:00 EDT 2013 · Standards in Genomic Sciences, 9(1):106-116 · OSTI ID:1130702

Complete genome sequences of Geobacillus sp. WCH70, a thermophilic strain isolated from wood compost

Journal Article · Wed Apr 27 00:00:00 EDT 2016 · Standards in Genomic Sciences · OSTI ID:1261376

Related Subjects

59 BASIC BIOLOGICAL SCIENCES

Complete Genome Sequence of Curtobacterium sp. Strain MR_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts

Citation Formats

References (11)

Cited By (1)

Similar Records

Related Subjects