Draft Genome Assemblies of Proteus mirabilis ATCC 7002 and Proteus vulgaris ATCC 49132

Minogue, T. D.; Daligault, H. E.; Davenport, K. W.; Bishop-Lilly, K. A.; Bruce, D. C.; Chain, P. S.; Coyne, S. R.; Chertkov, O.; Freitas, T.; Frey, K. G.; Jaissle, J.; Koroleva, G. I.; Ladner, J. T.; Palacios, G. F.; Redden, C. L.; Xu, Y.; Johnson, S. L.

doi:10.1128/genomeA.01064-14

Draft Genome Assemblies of Proteus mirabilis ATCC 7002 and Proteus vulgaris ATCC 49132

Journal Article · Thu Oct 23 04:00:00 EDT 2014 · Genome Announcements

DOI:https://doi.org/10.1128/genomeA.01064-14· OSTI ID:1629324

Minogue, T. D. ^[1]; Daligault, H. E. ^[2]; Davenport, K. W. ^[2]; Bishop-Lilly, K. A. ^[3]; Bruce, D. C. ^[2]; Chain, P. S. ^[2]; Coyne, S. R. ^[4]; Chertkov, O. ^[2]; Freitas, T. ^[2]; Frey, K. G. ^[3]; Jaissle, J. ^[2]; Koroleva, G. I. ^[5]; Ladner, J. T. ^[5]; Palacios, G. F. ^[5]; Redden, C. L. ^[3]; Xu, Y. ^[2]; Johnson, S. L. ^[2]

U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD); DOE/OSTI
Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
Naval Medical Research Center (NMRC), Frederick, Fort Detrick, MD (United States); Henry M. Jackson Foundation, Bethesda, MD (United States)
U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD)
U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Center for Genome Sciences (CGS)

The pleomorphic swarming bacilli of the genus Proteus are common human gut commensal organisms but also the causative agents of recurrent urinary tract infections and bacteremia. We sequenced and assembled the 3.99-Mbp genome of Proteus mirabilis ATCC 7002 (accession no. JOVJ00000000) and the 3.97-Mbp genome of Proteus vulgaris ATCC 49132 (accession no. JPIX00000000), both of which are commonly used reference strains.

Research Organization:: Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division

OSTI ID:: 1629324

Journal Information:: Genome Announcements, Journal Name: Genome Announcements Journal Issue: 5 Vol. 2; ISSN 2169-8287

Publisher:: American Society for MicrobiologyCopyright Statement

Country of Publication:: United States

Language:: English

References (11)

Swarming and pathogenicity of Proteus mirabilis in the urinary tract Mobley, Harry L. T.; Belas, Robert Trends in Microbiology, Vol. 3, Issue 7 https://doi.org/10.1016/S0966-842X(00)88945-3	journal	July 1995
Genome sequencing in microfabricated high-density picolitre reactors Margulies, Marcel; Egholm, Michael; Altman, William E. Nature, Vol. 437, Issue 7057, p. 376-380 https://doi.org/10.1038/nature03959	journal	July 2005
An Ergatis-based prokaryotic genome annotation web server Hemmerich, Chris; Buechlein, Aaron; Podicheti, Ram Bioinformatics, Vol. 26, Issue 8 https://doi.org/10.1093/bioinformatics/btq090	journal	March 2010
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs Zerbino, D. R.; Birney, E. Genome Research, Vol. 18, Issue 5 https://doi.org/10.1101/gr.074492.107	journal	February 2008
ALLPATHS: De novo assembly of whole-genome shotgun microreads Butler, J.; MacCallum, I.; Kleber, M. Genome Research, Vol. 18, Issue 5 https://doi.org/10.1101/gr.7337908	journal	February 2008
Base-Calling of Automated Sequencer Traces Using Phred. I. Accuracy Assessment Ewing, Brent; Hillier, LaDeana; Wendl, Michael C. Genome Research, Vol. 8, Issue 3 https://doi.org/10.1101/gr.8.3.175	journal	March 1998
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities Ewing, Brent; Green, Phil Genome Research, Vol. 8, Issue 3 https://doi.org/10.1101/gr.8.3.186	journal	March 1998
Consed: A Graphical Tool for Sequence Finishing Gordon, David; Abajian, Chris; Green, Phil Genome Research, Vol. 8, Issue 3 https://doi.org/10.1101/gr.8.3.195	journal	March 1998
Swarmer cell differentiation in Proteus mirabilis Rather, Philip N. Environmental Microbiology, Vol. 7, Issue 8 https://doi.org/10.1111/j.1462-2920.2005.00806.x	journal	August 2005
Potential virulence factors of Proteus bacilli Rózalski, A.; Sidorczyk, Z.; Kotełko, K. Microbiology and Molecular Biology Reviews, Vol. 61, Issue 1 https://doi.org/10.1128/mmbr.61.1.65-89.1997	journal	March 1997
Solexa Ltd Bennett, Simon Pharmacogenomics, Vol. 5, Issue 4 https://doi.org/10.1517/14622416.5.4.433	journal	June 2004

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Transcriptional Analysis of the MrpJ Network: Modulation of Diverse Virulence-Associated Genes and Direct Regulation of mrp Fimbrial and flhDC Flagellar Operons in Proteus mirabilis Bode, Nadine J.; Debnath, Irina; Kuan, Lisa Infection and Immunity, Vol. 83, Issue 6 https://doi.org/10.1128/iai.02978-14	journal	June 2015

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Draft Genome Assemblies of Proteus mirabilis ATCC 7002 and Proteus vulgaris ATCC 49132

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