Draft Genome Sequence of a Chromium-Reducing Strain, Pseudomonas fluorescens S613, Isolated from a Chromium-Contaminated Aquifer in Los Alamos, New Mexico

Wang, Dongping; Boukhalfa, Hakim; Ware, Doug S.; Daligault, Hajnalka E.

doi:10.1128/genomeA.00241-17

Draft Genome Sequence of a Chromium-Reducing Strain, Pseudomonas fluorescens S613, Isolated from a Chromium-Contaminated Aquifer in Los Alamos, New Mexico

Journal Article · Thu Apr 20 00:00:00 EDT 2017 · Genome Announcements

DOI:https://doi.org/10.1128/genomeA.00241-17· OSTI ID:1629075

Wang, Dongping ^[1]; Boukhalfa, Hakim ^[2]; Ware, Doug S. ^[2]; Daligault, Hajnalka E. ^[2]

Los Alamos National Lab. (LANL), Los Alamos, NM (United States); DOE/OSTI
Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

In this report, a chromium-reducing bacterium, Pseudomonas fluorescens strain S613, was isolated from a Cr(VI)-contaminated aquifer at Los Alamos, NM, and sequenced. The size of the draft genome sequence is approximately 6.7 Mb.

Research Organization:: Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division

Grant/Contract Number:: AC52-06NA25396

OSTI ID:: 1629075

Journal Information:: Genome Announcements, Journal Name: Genome Announcements Journal Issue: 16 Vol. 5; ISSN 2169-8287

Publisher:: American Society for MicrobiologyCopyright Statement

Country of Publication:: United States

Language:: English

References (13)

Assembling Genomic DNA Sequences with PHRAP Bastide, Melissa; McCombie, W. Richard Current Protocols in Bioinformatics, Vol. 17, Issue 1 https://doi.org/10.1002/0471250953.bi1104s17	journal	March 2007
Reduction of hexavalent chromium by Pseudomonas fluorescens LB300 in batch and continuous cultures DeLeo, Paul C.; Ehrlich, Henry L. Applied Microbiology and Biotechnology, Vol. 40, Issue 5 https://doi.org/10.1007/BF00173341	journal	January 1994
Chromate resistance and reduction in Pseudomonas fluorescens strain LB300 Bopp, Lawrence H.; Ehrlich, Henry L. Archives of Microbiology, Vol. 150, Issue 5 https://doi.org/10.1007/BF00422281	journal	September 1988
Enzymatic reduction of chromate: comparative studies using sulfate-reducing bacteria Michel, C.; Brugna, M.; Aubert, C. Applied Microbiology and Biotechnology, Vol. 55, Issue 1 https://doi.org/10.1007/s002530000467	journal	January 2001
Chromium(VI) Reduction by *Pseudomonas fluorescens* LB300 in Fixed-Film Bioreactor Chirwa, Evans M. N.; Wang, Yi-Tin Journal of Environmental Engineering, Vol. 123, Issue 8 https://doi.org/10.1061/(ASCE)0733-9372(1997)123:8(760)	journal	August 1997
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing Bankevich, Anton; Nurk, Sergey; Antipov, Dmitry Journal of Computational Biology, Vol. 19, Issue 5 https://doi.org/10.1089/cmb.2012.0021	journal	May 2012
An Ergatis-based prokaryotic genome annotation web server Hemmerich, Chris; Buechlein, Aaron; Podicheti, Ram Bioinformatics, Vol. 26, Issue 8 https://doi.org/10.1093/bioinformatics/btq090	journal	March 2010
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs Zerbino, D. R.; Birney, E. Genome Research, Vol. 18, Issue 5 https://doi.org/10.1101/gr.074492.107	journal	February 2008
Adaptation Genomics of a Small-Colony Variant in a Pseudomonas chlororaphis 30-84 Biofilm Wang, Dongping; Dorosky, Robert J.; Han, Cliff S. Applied and Environmental Microbiology, Vol. 81, Issue 3 https://doi.org/10.1128/AEM.02617-14	journal	November 2014
Enhanced Exopolymer Production and Chromium Stabilization in Pseudomonas putida Unsaturated Biofilms Priester, J. H.; Olson, S. G.; Webb, S. M. Applied and Environmental Microbiology, Vol. 72, Issue 3 https://doi.org/10.1128/AEM.72.3.1988-1996.2006	journal	March 2006
Draft Genome Sequence of Enterobacter cloacae Strain S611 Wang, D.; Han, C. S.; Dichosa, A. E. K. Genome Announcements, Vol. 2, Issue 6 https://doi.org/10.1128/genomeA.00710-14	journal	November 2014
Draft Genome Sequence of Pseudomonas putida Strain S610, a Seed-Borne Bacterium of Wheat Wang, D.; Han, C. S.; Dichosa, A. E. K. Genome Announcements, Vol. 1, Issue 6 https://doi.org/10.1128/genomeA.01048-13	journal	October 2013
Genome Sequence of a Chromium-Reducing Strain, Bacillus cereus S612 Wang, Dongping; Boukhalfa, Hakim; Ware, Doug S. Genome Announcements, Vol. 3, Issue 6 https://doi.org/10.1128/genomeA.01392-15	journal	December 2015

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