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Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads
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book
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January 2013 |
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The Repetitive DNA Elements Called CRISPRs and Their Associated Genes: Evidence of Horizontal Transfer Among Prokaryotes
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journal
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April 2006 |
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Halobacterium lacusprofundi sp. nov., a Halophilic Bacterium Isolated from Deep Lake, Antarctica
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journal
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November 1988 |
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Comparative Analysis of the Mosaic Genomes of Tailed Archaeal Viruses and Proviruses Suggests Common Themes for Virion Architecture and Assembly with Tailed Viruses of Bacteria
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journal
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March 2010 |
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MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices
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journal
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June 2016 |
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Limnology and biology of saline lakes in the Rauer Islands, eastern Antarctica
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journal
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September 2001 |
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The meromictic lakes and stratified marine basins of the Vestfold Hills, East Antarctica
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journal
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June 1999 |
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Genomic plasticity in prokaryotes: the case of the square haloarchaeon
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journal
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May 2007 |
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Metaproteogenomic analysis of a dominant green sulfur bacterium from Ace Lake, Antarctica
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journal
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March 2010 |
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Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains
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journal
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February 2010 |
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Microbial ecology of an Antarctic hypersaline lake: genomic assessment of ecophysiology among dominant haloarchaea
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journal
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February 2014 |
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Antarctic archaea–virus interactions: metaproteome-led analysis of invasion, evasion and adaptation
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journal
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June 2015 |
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Genomic island variability facilitates Prochlorococcus–virus coexistence
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journal
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June 2011 |
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Fast gapped-read alignment with Bowtie 2
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journal
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March 2012 |
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Explaining microbial population genomics through phage predation
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journal
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November 2009 |
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Prochlorococcus: the structure and function of collective diversity
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journal
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December 2014 |
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Microbial ecology of Antarctic aquatic systems
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journal
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October 2015 |
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A plasmid from an Antarctic haloarchaeon uses specialized membrane vesicles to disseminate and infect plasmid-free cells
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journal
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August 2017 |
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Developing a genetic manipulation system for the Antarctic archaeon, Halorubrum lacusprofundi: investigating acetamidase gene function
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journal
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October 2016 |
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Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: Implications for the microbial "pan-genome"
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journal
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September 2005 |
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High level of intergenera gene exchange shapes the evolution of haloarchaea in an isolated Antarctic lake
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journal
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September 2013 |
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Fast optimal leaf ordering for hierarchical clustering
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journal
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June 2001 |
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ACT: the Artemis comparison tool
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journal
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June 2005 |
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The Sequence Alignment/Map format and SAMtools
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journal
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June 2009 |
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Reordering contigs of draft genomes using the Mauve Aligner
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journal
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June 2009 |
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Fast and accurate long-read alignment with Burrows–Wheeler transform
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journal
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January 2010 |
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A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches
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journal
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May 2010 |
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InterProScan 5: genome-scale protein function classification
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journal
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January 2014 |
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Fast algorithms for large-scale genome alignment and comparison
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journal
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June 2002 |
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CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
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journal
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May 2007 |
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Analysis Tool Web Services from the EMBL-EBI
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journal
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May 2013 |
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Microbial species delineation using whole genome sequences
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journal
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July 2015 |
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IMG/M: integrated genome and metagenome comparative data analysis system
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journal
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October 2016 |
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From genomes to function: haloarchaea as model organisms
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journal
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March 2006 |
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Adaptive seeds tame genomic sequence comparison
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journal
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January 2011 |
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Antarctic biogeography revisited: updating the Antarctic Conservation Biogeographic Regions
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journal
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June 2016 |
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Diversity in prokaryotic glycosylation: an archaeal-derived N-linked glycan contains legionaminic acid: Diversity in haloarchaeal N-glycosylation
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journal
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April 2012 |
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POLYPHASIC STUDY OF ANTARCTIC CYANOBACTERIAL STRAINS 1
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journal
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November 2006 |
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Biogeographical distribution and ecological ranges of benthic cyanobacteria in East Antarctic lakes: Distribution and ecological ranges of Antarctic cyanobacteria
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journal
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August 2006 |
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On the use of high-throughput sequencing for the study of cyanobacterial diversity in Antarctic aquatic mats
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journal
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April 2016 |
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Genomic Islands and the Ecology and Evolution of Prochlorococcus
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journal
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March 2006 |
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Ecophysiological Distinctions of Haloarchaea from a Hypersaline Antarctic Lake as Determined by Metaproteomics
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journal
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March 2016 |
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Dynamic Viral Populations in Hypersaline Systems as Revealed by Metagenomic Assembly
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journal
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July 2012 |
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N-Glycosylation Is Important for Proper Haloferax volcanii S-Layer Stability and Function
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journal
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December 2016 |
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N-Glycosylation of Haloferax volcanii Flagellins Requires Known Agl Proteins and Is Essential for Biosynthesis of Stable Flagella
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journal
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June 2012 |
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AglC and AglK Are Involved in Biosynthesis and Attachment of Diacetylated Glucuronic Acid to the N-Glycan in Methanococcus voltae
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journal
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October 2008 |
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Genome Analyses of Icelandic Strains of Sulfolobus islandicus, Model Organisms for Genetic and Virus-Host Interaction Studies
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journal
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January 2011 |
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N-Linked Glycosylation in Archaea: a Structural, Functional, and Genetic Analysis
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journal
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May 2014 |
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Alternative flagellar filament types in the haloarchaeon Haloarcula marismortui
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journal
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October 2008 |
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S-Layer Glycoproteins and Flagellins: Reporters of Archaeal Posttranslational Modifications
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journal
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January 2010 |
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De Novo Sequences of Haloquadratum walsbyi from Lake Tyrrell, Australia, Reveal a Variable Genomic Landscape
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journal
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January 2015 |
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BLAST+: architecture and applications
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journal
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January 2009 |
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Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems
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journal
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January 2011 |
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CONTIGuator: a bacterial genomes finishing tool for structural insights on draft genomes
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journal
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January 2011 |
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Versatile and open software for comparing large genomes
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journal
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January 2004 |
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MEGAN-LR: new algorithms allow accurate binning and easy interactive exploration of metagenomic long reads and contigs
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journal
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January 2018 |
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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journal
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October 2015 |
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Haloquadratum walsbyi : Limited Diversity in a Global Pond
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journal
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June 2011 |
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Haloferax volcanii N-Glycosylation: Delineating the Pathway of dTDP-rhamnose Biosynthesis
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journal
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May 2014 |
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Structuring effects of climate-related environmental factors on Antarctic microbial mat communities
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journal
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March 2010 |