A globally convergent Lagrangian barrier algorithm for optimization with general inequality constraints and simple bounds
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January 1997 |
Hydrogen exchange and structural dynamics of proteins and nucleic acids
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November 1983 |
SASBDB, a repository for biological small-angle scattering data
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October 2014 |
Conformations of intrinsically disordered proteins are influenced by linear sequence distributions of oppositely charged residues
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July 2013 |
Structural basis of ligand interaction with atypical chemokine receptor 3
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January 2017 |
EPI-001, A Compound Active against Castration-Resistant Prostate Cancer, Targets Transactivation Unit 5 of the Androgen Receptor
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July 2016 |
Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water
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October 2017 |
Generating NMR chemical shift assignments of intrinsically disordered proteins using carbon-detected NMR methods
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March 2014 |
Defining a conformational ensemble that directs activation of PPARγ
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May 2018 |
Scalable molecular dynamics with NAMD
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January 2005 |
Replica exchange with guided annealing for accelerated sampling of disordered protein conformations
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July 2014 |
Consistent View of Polypeptide Chain Expansion in Chemical Denaturants from Multiple Experimental Methods
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September 2016 |
Coarse-Grained Potentials for Local Interactions in Unfolded Proteins
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November 2012 |
CRYSOL – a Program to Evaluate X-ray Solution Scattering of Biological Macromolecules from Atomic Coordinates
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December 1995 |
Determination of the regularization parameter in indirect-transform methods using perceptual criteria
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August 1992 |
Hypersensitive termination of the hypoxic response by a disordered protein switch
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March 2017 |
Gaussian Accelerated Molecular Dynamics: Unconstrained Enhanced Sampling and Free Energy Calculation
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July 2015 |
Intrinsically Disordered Proteins and Intrinsically Disordered Protein Regions
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June 2014 |
Folding of the glucocorticoid receptor N-terminal transactivation function: Dynamics and regulation
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January 2012 |
Protein 19 F NMR in Escherichia coli
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December 2009 |
An androgen receptor N-terminal domain antagonist for treating prostate cancer
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June 2013 |
Fast-SAXS-pro : A unified approach to computing SAXS profiles of DNA, RNA, protein, and their complexes
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January 2013 |
Prediction of Native-State Hydrogen Exchange from Perfectly Funneled Energy Landscapes
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November 2011 |
Intrinsically disordered proteins in cellular signalling and regulation
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December 2014 |
Distinct Structures of Scrapie Prion Protein (PrPSc)-seeded Versus Spontaneous Recombinant Prion Protein Fibrils Revealed by Hydrogen/Deuterium Exchange
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September 2009 |
Experimental Inferential Structure Determination of Ensembles for Intrinsically Disordered Proteins
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March 2016 |
Multidomain architecture of estrogen receptor reveals interfacial cross-talk between its DNA-binding and ligand-binding domains
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August 2018 |
Probing the Action of Chemical Denaturant on an Intrinsically Disordered Protein by Simulation and Experiment
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September 2016 |
The N-terminal Domain of p53 is Natively Unfolded
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October 2003 |
Predictive Atomic Resolution Descriptions of Intrinsically Disordered hTau40 and α-Synuclein in Solution from NMR and Small Angle Scattering
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February 2014 |
Regulation of Estrogen Receptor α N-Terminus Conformation and Function by Peptidyl Prolyl Isomerase Pin1
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January 2012 |
Solution Behavior of the Intrinsically Disordered N-Terminal Domain of Retinoid X Receptor α in the Context of the Full-Length Protein
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March 2016 |
ABSINTH: A new continuum solvation model for simulations of polypeptides in aqueous solutions
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April 2009 |
Comparison of multiple Amber force fields and development of improved protein backbone parameters
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November 2006 |
Putting the Pieces Together: Integrative Modeling Platform Software for Structure Determination of Macromolecular Assemblies
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January 2012 |
Classification of Intrinsically Disordered Regions and Proteins
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December 2013 |
Amide Hydrogen Exchange in a Highly Denatured State
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March 1994 |
SAXS Ensemble Refinement of ESCRT-III CHMP3 Conformational Transitions
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January 2011 |
Balanced Protein–Water Interactions Improve Properties of Disordered Proteins and Non-Specific Protein Association
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October 2014 |
Primary structure effects on peptide group hydrogen exchange
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September 1993 |
Structure of the p53 Transactivation Domain in Complex with the Nuclear Receptor Coactivator Binding Domain of CREB Binding Protein
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November 2010 |
Transcriptional activators differ in their responses to overexpression of TATA-box-binding protein
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March 1995 |
CHARMM36m: an improved force field for folded and intrinsically disordered proteins
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November 2016 |
Fluorine-19 NMR of integral membrane proteins illustrated with studies of GPCRs
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October 2013 |
Decoupling of size and shape fluctuations in heteropolymeric sequences reconciles discrepancies in SAXS vs. FRET measurements
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July 2017 |
Net charge per residue modulates conformational ensembles of intrinsically disordered proteins
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April 2010 |
Maximum Allowed Solvent Accessibilites of Residues in Proteins
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November 2013 |
Determination of an Ensemble of Structures Representing the Denatured State of the Bovine Acyl-Coenzyme A Binding Protein
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February 2004 |
Protein Footprinting Comes of Age: Mass Spectrometry for Biophysical Structure Assessment
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March 2017 |
Calculation of ensembles of structures representing the unfolded state of an SH3 domain
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May 2001 |
Flexible-meccano: a tool for the generation of explicit ensemble descriptions of intrinsically disordered proteins and their associated experimental observables
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May 2012 |
Replica Exchange with Solute Scaling: A More Efficient Version of Replica Exchange with Solute Tempering (REST2)
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August 2011 |
Quantitative Mapping of Protein Structure by Hydroxyl Radical Footprinting-Mediated Structural Mass Spectrometry: A Protection Factor Analysis
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January 2015 |
Multidomain assembled states of Hck tyrosine kinase in solution
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August 2010 |
Structure of promoter-bound TFIID and model of human pre-initiation complex assembly
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March 2016 |
Order within a Disordered Structure
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January 2018 |
Activation of Estrogen Receptor α by S118 Phosphorylation Involves a Ligand-Dependent Interaction with TFIIH and Participation of CDK7
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July 2000 |
New developments in force fields for biomolecular simulations
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April 2018 |
Radiolytic Protein Footprinting with mass Spectrometry to Probe the Structure of Macromolecular Complexes
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June 2006 |
Random-coil behavior and the dimensions of chemically unfolded proteins
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August 2004 |
A simple method for displaying the hydropathic character of a protein
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May 1982 |
Thermodynamic Dissection of the Intrinsically Disordered N-terminal Domain of Human Glucocorticoid Receptor
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August 2012 |
19 F Paramagnetic Relaxation Enhancement: A Valuable Tool for Distance Measurements in Proteins
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October 2015 |
Theoretical modeling of multiprotein complexes by iSPOT: Integration of small-angle X-ray scattering, hydroxyl radical footprinting, and computational docking
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December 2016 |
The IDP-Specific Force Field ff14IDPSFF Improves the Conformer Sampling of Intrinsically Disordered Proteins
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May 2017 |
Structural Interpretation of Paramagnetic Relaxation Enhancement-Derived Distances for Disordered Protein States
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July 2009 |
Combining Experiments and Simulations Using the Maximum Entropy Principle
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February 2014 |
A structural model for unfolded proteins from residual dipolar couplings and small-angle x-ray scattering
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November 2005 |
Quantitative Protein Topography Analysis and High-Resolution Structure Prediction Using Hydroxyl Radical Labeling and Tandem-Ion Mass Spectrometry (MS)
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February 2015 |
Phosphorylation-induced conformational dynamics in an intrinsically disordered protein and potential role in phenotypic heterogeneity
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March 2017 |
Activation of the Estrogen Receptor Through Phosphorylation by Mitogen-Activated Protein Kinase
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December 1995 |
Force field development and simulations of intrinsically disordered proteins
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February 2018 |
Structure and function of steroid receptor AF1 transactivation domains: induction of active conformations
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October 2005 |
A generic implementation of replica exchange with solute tempering (REST2) algorithm in NAMD for complex biophysical simulations
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December 2015 |
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
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November 1995 |
On the statistical equivalence of restrained-ensemble simulations with the maximum entropy method
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February 2013 |
Regulation of the Structurally Dynamic N-terminal Domain of Progesterone Receptor by Protein-induced Folding
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October 2013 |
Characterization of disordered proteins with ENSEMBLE
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December 2012 |
The human estrogen receptor has two independent nonacidic transcriptional activation functions
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November 1989 |
Structural organization of brain-derived mammalian prions examined by hydrogen-deuterium exchange
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March 2011 |
Regulation of Androgen Receptor Activity by Transient Interactions of Its Transactivation Domain with General Transcription Regulators
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January 2018 |
Automated analysis of interatomic contacts in proteins
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April 1999 |
The N-terminal Regions of Estrogen Receptor α and β Are Unstructured in Vitro and Show Different TBP Binding Properties
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December 2001 |
Current applications of 19F NMR to studies of protein structure and dynamics
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April 2012 |
Natively unfolded proteins: A point where biology waits for physics
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April 2002 |
Water Dispersion Interactions Strongly Influence Simulated Structural Properties of Disordered Protein States
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April 2015 |