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Fire affects the taxonomic and functional composition of soil microbial communities, with cascading effects on grassland ecosystem functioning

Journal Article · · Global Change Biology
DOI:https://doi.org/10.1111/gcb.14852· OSTI ID:1580930
 [1];  [1];  [1];  [2];  [1];  [3];  [4];  [3];  [5];  [6];  [7];  [8];  [9]
  1. Tsinghua Univ., Beijing (China). State Key Joint Lab. of Environment Simulation and Pollution Control, School of Environment
  2. Univ. of Oklahoma, Norman, OK (United States). Inst. for Environmental Genomics
  3. Carnegie Inst. for Science, Stanford, CA (United States)
  4. Western Michigan Univ., Kalamazoo MI (United States)
  5. Helmholtz Centre for Environmental Research– UFZ, Halle (Germany)
  6. Northern Arizona Univ., Flagstaff, AZ (United States). Center for Ecosystem Science and Society
  7. Inst. d'Ecologie et des Sciences de l'Environnement de Paris, Paris (France); Sorbonne Univ., Paris (France); Univ. Paris Diderot, Paris (France). Centre National de la Recherche Scientifique (CNRS), Inst. National de la Recherche Agronomique (INRA)
  8. Univ. de Lyon, Villeurbanne (France). Lab. d'Ecologie Microbienne, and Centre National de la Recherche Scientifique (CNRS), Inst. National de la Recherche Agronomique (INRA)
  9. Tsinghua Univ., Beijing (China). State Key Joint Lab. of Environment Simulation and Pollution Control, School of Environment; Univ. of Oklahoma, Norman, OK (United States). Inst. for Environmental Genomics; Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Fire is a crucial event regulating the structure and functioning of many ecosystems. Yet few studies have focused on how fire affects taxonomic and functional diversities of soil microbial communities, along with changes in plant communities and soil carbon (C) and nitrogen (N) dynamics. Here, we analyze these effects in a grassland ecosystem 9 months after an experimental fire at the Jasper Ridge Global Change Experiment site in California, USA. Fire altered soil microbial communities considerably, with community assembly process analysis showing that environmental selection pressure was higher in burned sites. However, a small subset of highly connected taxa was able to withstand the disturbance. In addition, fire decreased the relative abundances of most functional genes associated with C degradation and N cycling, implicating a slowdown of microbial processes linked to soil C and N dynamics. In contrast, fire stimulated above- and belowground plant growth, likely enhancing plant-microbe competition for soil inorganic N, which was reduced by a factor of about 2. To synthesize those findings, we performed structural equation modeling, which showed that plants but not microbial communities were responsible for significantly higher soil respiration rates in burned sites. Together, our results demonstrate that fire 'reboots' the grassland ecosystem by differentially regulating plant and soil microbial communities, leading to significant changes in soil C and N dynamics.
Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
Chinese Academy of Sciences (CAS); French CNRS/INSU–EC2CO Program; Morgan Family Foundation; National Natural Science Foundation of China (NNSFC); National Science Foundation (NSF); Packard Foundation; USDOE Office of Science (SC)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1580930
Alternate ID(s):
OSTI ID: 1572112
Journal Information:
Global Change Biology, Journal Name: Global Change Biology Journal Issue: 2 Vol. 26; ISSN 1354-1013
Publisher:
WileyCopyright Statement
Country of Publication:
United States
Language:
English

References (62)

Metagenomic Assessment of the Potential Microbial Nitrogen Pathways in the Rhizosphere of a Mediterranean Forest After a Wildfire journal March 2015
Fire-driven alien invasion in a fire-adapted ecosystem journal January 2012
High resilience of the mycorrhizal community to prescribed seasonal burnings in eastern Mediterranean woodlands journal January 2021
Postfire Soil N Cycling in Northern Conifer Forests Affected by Severe, Stand-Replacing Wildfires journal February 2005
Interactive Effects of Fire, Elevated Carbon Dioxide, Nitrogen Deposition, and precipitation on a California Annual Grassland journal November 2006
Wildfire reduces carbon dioxide efflux and increases methane uptake in ponderosa pine forest soils of the southwestern USA journal July 2010
Soil microbial responses to fire and interacting global change factors in a California annual grassland journal October 2011
Mechanisms controlling soil carbon turnover and their potential application for enhancing carbon sequestration journal December 2006
Charcoal and shrubs modify soil processes in ponderosa pine forests of western Montana journal August 2006
Changes in enzyme activities and microbial biomass of tallgrass prairie soil as related to burning and nitrogen fertilization journal May 1999
Short-term effects of fire on soil nitrogen availability in Mediterranean grasslands and shrublands growing in old fields journal June 2001
Fire effects on belowground sustainability: a review and synthesis journal September 1999
Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species journal October 2012
Post-fire vegetative dynamics as drivers of microbial community structure and function in forest soils journal December 2005
Inter-annual variation in soil extra-cellular enzyme activity in response to simulated global change and fire disturbance journal August 2010
Soil respiration dynamics in fire affected semi-arid ecosystems: Effects of vegetation type and environmental factors journal December 2016
Tropical savannah woodland: effects of experimental fire on soil microorganisms and soil emissions of carbon dioxide journal May 2004
Water- and plant-mediated responses of soil respiration to topography, fire, and nitrogen fertilization in a semiarid grassland in northern China journal March 2008
Positive and negative carbon mineralization priming effects among a variety of biochar-amended soils journal June 2011
Soil environmental factors rather than denitrification gene abundance control N2O fluxes in a wet sclerophyll forest with different burning frequency journal February 2013
Fire as an evolutionary pressure shaping plant traits journal August 2011
The Impact of Climate Change on Wildfire Severity: A Regional Forecast for Northern California journal May 2004
How surface fire in Siberian Scots pine forests affects soil organic carbon in the forest floor: Stocks, molecular structure, and conversion to black carbon (charcoal): SURFACE FIRE IN SIBERIAN SCOTS PINE FOREST journal March 2003
Comparison of nitrogen monoxide emissions from several African tropical ecosystems and influence of season and fire journal December 1998
Stochastic and deterministic processes interact in the assembly of desert microbial communities on a global scale journal March 2011
Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes journal February 2013
Quantifying community assembly processes and identifying features that impose them journal June 2013
Taxonomical and functional microbial community selection in soybean rhizosphere journal February 2014
Dynamics in microbial communities: unraveling mechanisms to identify principles journal December 2014
Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest journal April 2014
Nitrogen limitation constrains sustainability of ecosystem response to CO2 journal April 2006
The links between ecosystem multifunctionality and above- and belowground biodiversity are mediated by climate journal September 2015
Microbial community structure and functional properties in permanently and seasonally flooded areas in Poyang Lake journal March 2020
Autogenic succession and deterministic recovery following disturbance in soil bacterial communities journal April 2017
Soil-surface carbon dioxide efflux and microbial biomass in relation to tree density 13 years after a stand replacing fire in a lodgepole pine ecosystem journal May 2003
Inorganic nitrogen availability after severe stand-replacing fire in the Greater Yellowstone ecosystem journal March 2007
Metabolic modeling of species interaction in the human microbiome elucidates community-level assembly rules journal July 2013
Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession journal March 2015
Metabolic dependencies drive species co-occurrence in diverse microbial communities journal May 2015
Search and clustering orders of magnitude faster than BLAST journal August 2010
UCHIME improves sensitivity and speed of chimera detection journal June 2011
FLASH: fast length adjustment of short reads to improve genome assemblies journal September 2011
The interactive effects of soil transplant into colder regions and cropping on soil microbiology and biogeochemistry: Effects of northward soil transplant and cropping journal February 2014
Keystone taxa predict compositional change in microbial communities journal June 2018
Responses of the functional structure of soil microbial community to livestock grazing in the Tibetan alpine grassland journal November 2012
Experimental fire increases soil carbon dioxide efflux in a grassland long-term multifactor global change experiment journal November 2016
Interactive effects of elevated CO2, N deposition and climate change on extracellular enzyme activity and soil density fractionation in a California annual grassland journal October 2005
Interactive effects of wildfire and permafrost on microbial communities and soil processes in an Alaskan black spruce forest journal September 2008
Precipitation variability and fire influence the temporal dynamics of soil CO2 efflux in an arid grassland journal January 2012
Insidious effects of sequencing errors on perceived diversity in molecular surveys: Letters journal September 2010
Warming and Earlier Spring Increase Western U.S. Forest Wildfire Activity journal August 2006
Fire in the Earth System journal April 2009
The ecology of the microbiome: Networks, competition, and stability journal November 2015
DNA recovery from soils of diverse composition. journal January 1996
Changes in Nitrogen-Fixing and Ammonia-Oxidizing Bacterial Communities in Soil of a Mixed Conifer Forest after Wildfire journal May 2005
Normalization and microbial differential abundance strategies depend upon data characteristics journal March 2017
Global Change Could Amplify Fire Effects on Soil Greenhouse Gas Emissions journal June 2011
Soil n and Plant Responses to Fire, Topography, and Supplemental n in Tallgrass Prairie journal September 1997
Fire and Vegetation Effects on Productivity and Nitrogen Cycling Across a Forest–Grassland Continuum journal June 2001
DETERMINANTS OF SOIL CO 2 FLUX FROM A SUB-HUMID GRASSLAND: EFFECT OF FIRE AND FIRE HISTORY journal August 1998
Fire and Vegetation Effects on Productivity and Nitrogen Cycling across a Forest-Grassland Continuum journal June 2001
Global Change Could Amplify Fire Effects on Soil Greenhouse Gas Emissions text January 2011