A compendium of multi-omic sequence information from the Saanich Inlet water column

Hawley, Alyse K.; Torres-Beltrán, Mónica; Zaikova, Elena; Walsh, David A.; Mueller, Andreas; Scofield, Melanie; Kheirandish, Sam; Payne, Chris; Pakhomova, Larysa; Bhatia, Maya; Shevchuk, Olena; Gies, Esther A.; Fairley, Diane; Malfatti, Stephanie A.; Norbeck, Angela D.; Brewer, Heather M.; Pasa-Tolic, Ljiljana; del Rio, Tijana Glavina; Suttle, Curtis A.; Tringe, Susannah; Hallam, Steven J.

doi:10.1038/sdata.2017.160

A compendium of multi-omic sequence information from the Saanich Inlet water column

Journal Article · 31 October 2017 · Scientific Data

DOI:https://doi.org/10.1038/sdata.2017.160· OSTI ID:1571089

; Torres-Beltrán, Mónica; Zaikova, Elena; Walsh, David A.; Mueller, Andreas; Scofield, Melanie; Kheirandish, Sam; Payne, Chris; Pakhomova, Larysa; Bhatia, Maya; Shevchuk, Olena; Gies, Esther A.; Fairley, Diane; Malfatti, Stephanie A.; Norbeck, Angela D.; Brewer, Heather M.; Pasa-Tolic, Ljiljana; del Rio, Tijana Glavina; Suttle, Curtis A.; Tringe, Susannah more »

Marine oxygen minimum zones (OMZs) are widespread regions of the ocean that are currently expanding due to global warming. While inhospitable to most metazoans, OMZs are hotspots for microbial mediated biogeochemical cycling of carbon, nitrogen and sulphur, contributing disproportionately to marine nitrogen loss and climate active trace gas production. Our current understanding of microbial community responses to OMZ expansion is limited by a lack of time-resolved data sets linking multi-omic sequence information (DNA, RNA, protein) to geochemical parameters and process rates. Here, we present six years of time-resolved multi-omic observations in Saanich Inlet, a seasonally anoxic fjord on the coast of Vancouver Island, British Columbia, Canada that undergoes recurring changes in water column oxygenation status. This compendium provides a unique multi-omic framework for studying microbial community responses to ocean deoxygenation along defined geochemical gradients in OMZ waters.

Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23), Biological Systems Science Division (SC-23.2 )

DOE Contract Number:: AC02-05CH11231

OSTI ID:: 1571089

Journal Information:: Scientific Data, Vol. 4, Issue 1; ISSN 2052-4463

Publisher:: Nature Publishing Group

Country of Publication:: United States

Language:: English

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