Nature of peptide wrapping onto metal nanoparticle catalysts and driving forces for size control

Ramezani-Dakhel, Hadi; Bedford, Nicholas M.; Woehl, Taylor J.; Knecht, Marc R.; Naik, Rajesh R.; Heinz, Hendrik

doi:10.1039/c7nr02813j

Title: Nature of peptide wrapping onto metal nanoparticle catalysts and driving forces for size control

Journal Article · Sun Jan 01 00:00:00 EST 2017 · Nanoscale

DOI:https://doi.org/10.1039/c7nr02813j· OSTI ID:1565588

Ramezani-Dakhel, Hadi; Bedford, Nicholas M.; Woehl, Taylor J.; Knecht, Marc R.; Naik, Rajesh R.;

Colloidal metal nanocrystals find many applications in catalysis, energy conversion devices, and therapeutics. However, the nature of ligand interactions and implications on shape control have remained uncertain at the atomic scale. Large differences in peptide adsorption strength and facet specificity were found on flat palladium surfaces versus surfaces of nanoparticles of 2 to 3 nm size using accurate atomistic simulations with the Interface force field. Folding of longer peptides across many facets explains the formation of near-spherical particles with local surface disorder, in contrast to the possibility of nanostructures of higher symmetry with shorter ligands. The average particle size in TEM correlates inversely with the surface coverage with a given ligand and with the strength of ligand adsorption. The role of specific amino acids and sequence mutations on the nanoparticle size and facet composition is discussed, as well as the origin of local surface disorder that leads to large differences in catalytic reactivity.

Cite

Export

Save

Research Organization:: Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF); Argonne National Lab. (ANL), Argonne, IL (United States); UT-Battelle LLC/ORNL, Oak Ridge, TN (United States)

Sponsoring Organization:: USDOE Office of Science (SC)

DOE Contract Number:: AC02-06CH11357; AC05-00OR22725

OSTI ID:: 1565588

Journal Information:: Nanoscale, Vol. 9, Issue 24; ISSN 2040-3364

Publisher:: Royal Society of Chemistry

Country of Publication:: United States

Language:: English

References (49)

Intrinsic therapeutic applications of noble metal nanoparticles: past, present and future Arvizo, Rochelle R.; Bhattacharyya, Sanjib; Kudgus, Rachel A. Chemical Society Reviews, Vol. 41, Issue 7 https://doi.org/10.1039/c2cs15355f	journal	January 2012
Noble Metals on the Nanoscale: Optical and Photothermal Properties and Some Applications in Imaging, Sensing, Biology, and Medicine Jain, Prashant K.; Huang, Xiaohua; El-Sayed, Ivan H. Accounts of Chemical Research, Vol. 41, Issue 12, p. 1578-1586 https://doi.org/10.1021/ar7002804	journal	December 2008
Gold Nanomaterials at Work in Biomedicine Yang, Xuan; Yang, Miaoxin; Pang, Bo Chemical Reviews, Vol. 115, Issue 19 https://doi.org/10.1021/acs.chemrev.5b00193	journal	April 2015
Enabling direct H2O2 production through rational electrocatalyst design Siahrostami, Samira; Verdaguer-Casadevall, Arnau; Karamad, Mohammadreza Nature Materials, Vol. 12, Issue 12 https://doi.org/10.1038/nmat3795	journal	November 2013
Biomolecular specificity controlled nanomaterial synthesis Chiu, Chin-Yi; Ruan, Lingyan; Huang, Yu Chem. Soc. Rev., Vol. 42, Issue 7 https://doi.org/10.1039/C2CS35347D	journal	January 2013
Exploiting Localized Surface Binding Effects to Enhance the Catalytic Reactivity of Peptide-Capped Nanoparticles Coppage, Ryan; Slocik, Joseph M.; Ramezani-Dakhel, Hadi Journal of the American Chemical Society, Vol. 135, Issue 30 https://doi.org/10.1021/ja402215t	journal	July 2013
Biomimetic Synthesis of Pd Nanocatalysts for the Stille Coupling Reaction Pacardo, Dennis B.; Sethi, Manish; Jones, Sharon E. ACS Nano, Vol. 3, Issue 5 https://doi.org/10.1021/nn9002709	journal	April 2009
Platinum nanocrystals selectively shaped using facet-specific peptide sequences Chiu, Chin-Yi; Li, Yujing; Ruan, Lingyan Nature Chemistry, Vol. 3, Issue 5 https://doi.org/10.1038/nchem.1025	journal	April 2011
Size-controlled synthesis of Pd nanocrystals using a specific multifunctional peptide Chiu, Chin-Yi; Li, Yujing; Huang, Yu Nanoscale, Vol. 2, Issue 6 https://doi.org/10.1039/c0nr00194e	journal	January 2010
Elucidation of Peptide-Directed Palladium Surface Structure for Biologically Tunable Nanocatalysts Bedford, Nicholas M.; Ramezani-Dakhel, Hadi; Slocik, Joseph M. ACS Nano, Vol. 9, Issue 5 https://doi.org/10.1021/acsnano.5b00168	journal	May 2015
Pt-Based Icosahedral Nanocages: Using a Combination of {111} Facets, Twin Defects, and Ultrathin Walls to Greatly Enhance Their Activity toward Oxygen Reduction Wang, Xue; Figueroa-Cosme, Legna; Yang, Xuan Nano Letters, Vol. 16, Issue 2 https://doi.org/10.1021/acs.nanolett.5b05140	journal	January 2016
Colloidal nanoparticles as advanced biological sensors Howes, Philip D.; Chandrawati, Rona; Stevens, Molly M. Science, Vol. 346, Issue 6205 https://doi.org/10.1126/science.1247390	journal	October 2014
Molecular Mechanism of Specific Recognition of Cubic Pt Nanocrystals by Peptides and of the Concentration-Dependent Formation from Seed Crystals Ramezani-Dakhel, Hadi; Ruan, Lingyan; Huang, Yu Advanced Functional Materials, Vol. 25, Issue 9 https://doi.org/10.1002/adfm.201404136	journal	January 2015
Controlling Structure and Porosity in Catalytic Nanoparticle Superlattices with DNA Auyeung, Evelyn; Morris, William; Mondloch, Joseph E. Journal of the American Chemical Society, Vol. 137, Issue 4 https://doi.org/10.1021/ja512116p	journal	January 2015
Nanoparticle decoration with surfactants: Molecular interactions, assembly, and applications Heinz, Hendrik; Pramanik, Chandrani; Heinz, Ozge Surface Science Reports, Vol. 72, Issue 1 https://doi.org/10.1016/j.surfrep.2017.02.001	journal	February 2017
Synthesis of Platinum Single-Twinned Right Bipyramid and {111}-Bipyramid through Targeted Control over Both Nucleation and Growth Using Specific Peptides Ruan, Lingyan; Chiu, Chin-Yi; Li, Yujing Nano Letters, Vol. 11, Issue 7 https://doi.org/10.1021/nl201958w	journal	July 2011
Protein- and Peptide-Directed Syntheses of Inorganic Materials Dickerson, Matthew B.; Sandhage, Kenneth H.; Naik, Rajesh R. Chemical Reviews, Vol. 108, Issue 11, p. 4935-4978 https://doi.org/10.1021/cr8002328	journal	November 2008
Atomic-scale identification of Pd leaching in nanoparticle catalyzed C–C coupling: effects of particle surface disorder Briggs, Beverly D.; Bedford, Nicholas M.; Seifert, Soenke Chemical Science, Vol. 6, Issue 11 https://doi.org/10.1039/C5SC01424G	journal	January 2015
“Homeopathic” Catalytic Activity and Atom-Leaching Mechanism in Miyaura-Suzuki Reactions under Ambient Conditions with Precise Dendrimer-Stabilized Pd Nanoparticles Diallo, Abdou Khadri; Ornelas, Cátia; Salmon, Lionel Angewandte Chemie International Edition, Vol. 46, Issue 45 https://doi.org/10.1002/anie.200703067	journal	October 2007
Palladium metal catalysts in Heck CC coupling reactions Biffis, Andrea; Zecca, Marco; Basato, Marino Journal of Molecular Catalysis A: Chemical, Vol. 173, Issue 1-2 https://doi.org/10.1016/S1381-1169(01)00153-4	journal	September 2001
Simulations of inorganic–bioorganic interfaces to discover new materials: insights, comparisons to experiment, challenges, and opportunities Heinz, Hendrik; Ramezani-Dakhel, Hadi Chemical Society Reviews, Vol. 45, Issue 2 https://doi.org/10.1039/C5CS00890E	journal	January 2016
Adsorption mechanism of single amino acid and surfactant molecules to Au {111} surfaces in aqueous solution: design rules for metal-binding molecules Feng, Jie; Pandey, Ras B.; Berry, Rajiv J. Soft Matter, Vol. 7, Issue 5 https://doi.org/10.1039/c0sm01118e	journal	January 2011
Nature of Molecular Interactions of Peptides with Gold, Palladium, and Pd−Au Bimetal Surfaces in Aqueous Solution Heinz, Hendrik; Farmer, Barry L.; Pandey, Ras B. Journal of the American Chemical Society, Vol. 131, Issue 28 https://doi.org/10.1021/ja900531f	journal	July 2009
Thermodynamically Consistent Force Fields for the Assembly of Inorganic, Organic, and Biological Nanostructures: The INTERFACE Force Field Heinz, Hendrik; Lin, Tzu-Jen; Kishore Mishra, Ratan Langmuir, Vol. 29, Issue 6 https://doi.org/10.1021/la3038846	journal	January 2013
Theoretical Description of the Role of Halides, Silver, and Surfactants on the Structure of Gold Nanorods Almora-Barrios, Neyvis; Novell-Leruth, Gerard; Whiting, Peter Nano Letters, Vol. 14, Issue 2 https://doi.org/10.1021/nl404661u	journal	January 2014
From Gold Nanoseeds to Nanorods: The Microscopic Origin of the Anisotropic Growth Meena, Santosh Kumar; Sulpizi, Marialore Angewandte Chemie International Edition, Vol. 55, Issue 39 https://doi.org/10.1002/anie.201604594	journal	August 2016
Conformational Behavior of Genetically-Engineered Dodecapeptides as a Determinant of Binding Affinity for Gold. Corni, Stefano; Hnilova, Marketa; Tamerler, Candan The Journal of Physical Chemistry C, Vol. 117, Issue 33 https://doi.org/10.1021/jp404057h	journal	August 2013
Facet Recognition and Molecular Ordering of Ionic Liquids on Metal Surfaces Jha, Kshitij C.; Liu, Hua; Bockstaller, Michael R. The Journal of Physical Chemistry C, Vol. 117, Issue 49 https://doi.org/10.1021/jp4032404	journal	November 2013
Tailoring Molecular Specificity Toward a Crystal Facet: a Lesson From Biorecognition Toward Pt{111} Ruan, Lingyan; Ramezani-Dakhel, Hadi; Chiu, Chin-Yi Nano Letters, Vol. 13, Issue 2 https://doi.org/10.1021/nl400022g	journal	January 2013
A Rational Biomimetic Approach to Structure Defect Generation in Colloidal Nanocrystals Ruan, Lingyan; Ramezani-Dakhel, Hadi; Lee, Chain ACS Nano, Vol. 8, Issue 7 https://doi.org/10.1021/nn501704k	journal	June 2014
Determining Peptide Sequence Effects That Control the Size, Structure, and Function of Nanoparticles Coppage, Ryan; Slocik, Joseph M.; Briggs, Beverly D. ACS Nano, Vol. 6, Issue 2 https://doi.org/10.1021/nn204600d	journal	January 2012
Chemistry of Aqueous Silica Nanoparticle Surfaces and the Mechanism of Selective Peptide Adsorption Patwardhan, Siddharth V.; Emami, Fateme S.; Berry, Rajiv J. Journal of the American Chemical Society, Vol. 134, Issue 14 https://doi.org/10.1021/ja211307u	journal	April 2012
Accurate Force Field Parameters and pH Resolved Surface Models for Hydroxyapatite to Understand Structure, Mechanics, Hydration, and Biological Interfaces Lin, Tzu-Jen; Heinz, Hendrik The Journal of Physical Chemistry C, Vol. 120, Issue 9 https://doi.org/10.1021/acs.jpcc.5b12504	journal	February 2016
Accurate Simulation of Surfaces and Interfaces of Face-Centered Cubic Metals Using 12−6 and 9−6 Lennard-Jones Potentials Heinz, Hendrik; Vaia, R. A.; Farmer, B. L. The Journal of Physical Chemistry C, Vol. 112, Issue 44 https://doi.org/10.1021/jp801931d	journal	October 2008
Influence of the Shape of Nanostructured Metal Surfaces on Adsorption of Single Peptide Molecules in Aqueous Solution Feng, Jie; Slocik, Joseph M.; Sarikaya, Mehmet Small, Vol. 8, Issue 7 https://doi.org/10.1002/smll.201102066	journal	February 2012
Structure, Interaction, and Dynamics of Au/Pd Bimetallic Nanoalloys Dispersed in Aqueous Ethylpyrrolidone, a Monomeric Moiety of Polyvinylpyrrolidone Gupta, Aditi; Boekfa, Bundet; Sakurai, Hidehiro The Journal of Physical Chemistry C, Vol. 120, Issue 31 https://doi.org/10.1021/acs.jpcc.6b05097	journal	July 2016
Crystallographic Recognition Controls Peptide Binding for Bio-Based Nanomaterials Coppage, Ryan; Slocik, Joseph M.; Briggs, Beverly D. Journal of the American Chemical Society, Vol. 133, Issue 32 https://doi.org/10.1021/ja203726n	journal	August 2011
Elucidation of Peptide Effects that Control the Activity of Nanoparticles Coppage, Ryan; Slocik, Joseph M.; Sethi, Manish Angewandte Chemie International Edition, Vol. 49, Issue 22 https://doi.org/10.1002/anie.200906949	journal	April 2010
Adsorption Behavior of Linear and Cyclic Genetically Engineered Platinum Binding Peptides Seker, Urartu Ozgur Safak; Wilson, Brandon; Dincer, Sevil Langmuir, Vol. 23, Issue 15 https://doi.org/10.1021/la700446g	journal	July 2007
Adsorption Kinetics of an Engineered Gold Binding Peptide by Surface Plasmon Resonance Spectroscopy and a Quartz Crystal Microbalance Tamerler, Candan; Oren, Ersin Emre; Duman, Memed Langmuir, Vol. 22, Issue 18 https://doi.org/10.1021/la0606897	journal	August 2006
Interaction of Gold Nanoparticles with Common Human Blood Proteins Lacerda, Silvia H. De Paoli; Park, Jung Jin; Meuse, Curt ACS Nano, Vol. 4, Issue 1 https://doi.org/10.1021/nn9011187	journal	December 2009
Shape-Controlled Synthesis of Metal Nanocrystals: Simple Chemistry Meets Complex Physics? Xia, Younan; Xiong, Yujie; Lim, Byungkwon Angewandte Chemie International Edition, Vol. 48, Issue 1, p. 60-103 https://doi.org/10.1002/anie.200802248	journal	December 2008
Stability, surface features, and atom leaching of palladium nanoparticles: toward prediction of catalytic functionality Ramezani-Dakhel, Hadi; Mirau, Peter A.; Naik, Rajesh R. Physical Chemistry Chemical Physics, Vol. 15, Issue 15 https://doi.org/10.1039/c3cp00135k	journal	January 2013
Effects of Substrate Molecular Structure on the Catalytic Activity of Peptide-Templated Pd Nanomaterials Pacardo, Dennis B.; Ardman, Eric; Knecht, Marc R. The Journal of Physical Chemistry C, Vol. 118, Issue 5 https://doi.org/10.1021/jp410255g	journal	January 2014
The golden age: gold nanoparticles for biomedicine Dreaden, Erik C.; Alkilany, Alaaldin M.; Huang, Xiaohua Chem. Soc. Rev., Vol. 41, Issue 7 https://doi.org/10.1039/C1CS15237H	journal	January 2012
Defining Rules for the Shape Evolution of Gold Nanoparticles Langille, Mark R.; Personick, Michelle L.; Zhang, Jian Journal of the American Chemical Society, Vol. 134, Issue 35 https://doi.org/10.1021/ja305245g	journal	August 2012
Adsorption of peptides (A3, Flg, Pd2, Pd4) on gold and palladium surfaces by a coarse-grained Monte Carlo simulation Pandey, R. B.; Heinz, Hendrik; Feng, Jie Physical Chemistry Chemical Physics, Vol. 11, Issue 12 https://doi.org/10.1039/b816187a	journal	January 2009
Hybrid Palladium Nanoparticles for Direct Hydrogen Peroxide Synthesis: The Key Role of the Ligand Lari, Giacomo M.; Puértolas, Begoña; Shahrokhi, Masoud Angewandte Chemie International Edition, Vol. 56, Issue 7 https://doi.org/10.1002/anie.201610552	journal	December 2016
Interfacial acidity in ligand-modified ruthenium nanoparticles boosts the hydrogenation of levulinic acid to gamma-valerolactone Albani, Davide; Li, Qiang; Vilé, Gianvito Green Chemistry, Vol. 19, Issue 10 https://doi.org/10.1039/C6GC02586B	journal	January 2017

Similar Records

Templating Colloidal Metal Nanoparticle Assemblies: Use of the A[beta] Amyloid Peptide Nanotube

Conference · Tue Feb 22 00:00:00 EST 2005 · OSTI ID:1565588

Lu, Kun; Conticello, Vincent P; Lynn, David G

Nanoscale cooperative adsorption for materials control

Journal Article · Tue Jul 13 00:00:00 EDT 2021 · Nature Communications · OSTI ID:1565588

Ye, Rong; Zhao, Ming; Mao, Xianwen; +5 more

Structure Sensitivity of Carbon-Nitrogen Ring Opening: Impact of Platinum Particle Size from below 1 to 5 nm upon Pyrrole Hydrogenation Product Selectivity over Monodisperse Platinum Nanoparticles Loaded onto Mesoporous Silica

Journal Article · Tue Jul 01 00:00:00 EDT 2008 · Journal of the American Chemical Society · OSTI ID:1565588

Kuhn, John N; Huang, Wenyu; Tsung, Chia-Kuang; +2 more

Related Subjects

Chemistry
Science & Technology - Other Topics
Materials Science
Physics

Title: Nature of peptide wrapping onto metal nanoparticle catalysts and driving forces for size control

Citation Formats

References (49)

Similar Records

Related Subjects