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Structure and structure-preserving algorithms for plasma physics

Journal Article · · Physics of Plasmas
DOI:https://doi.org/10.1063/1.4982054· OSTI ID:1535308
 [1]
  1. Univ. of Texas, Austin, TX (United States). Dept. of Physics and Inst. for Fusion Studies; DOE/OSTI
Hamiltonian and action principle (HAP) formulations of plasma physics are reviewed for the purpose of explaining structure preserving numerical algorithms. Geometric structures associated with and emergent from HAP formulations are discussed. These include conservative integration, which exactly conserves invariants, symplectic integration, which exactly preserves the Hamiltonian geometric structure, and other Hamiltonian integration techniques. Basic ideas of variational integration and Poisson integration, which can preserve the noncanonical Hamiltonian structure, are discussed. Metriplectic integration, which preserves the structure of conservative systems with both Hamiltonian and dissipative parts, is proposed. Two kinds of simulated annealing, a relaxation technique for obtaining equilibrium states, are reviewed: one that uses metriplectic dynamics, which maximizes an entropy at fixed energy, and the other that uses double bracket dynamics, which preserves Casimir invariants. Throughout, applications to plasma systems are emphasized. The paper concludes with a discussion of geometric electromagnetic particle-in-cell [Kraus et al., J. Plasma Phys. (to be published); e-print arXiv:1609.03053v1 [math.NA]], a particle in cell code that incorporates Hamiltonian and geometrical structure preserving properties.
Research Organization:
Univ. of Texas, Austin, TX (United States)
Sponsoring Organization:
USDOE
Grant/Contract Number:
FG05-80ET53088
OSTI ID:
1535308
Journal Information:
Physics of Plasmas, Journal Name: Physics of Plasmas Journal Issue: 5 Vol. 24; ISSN PHPAEN; ISSN 1070-664X
Publisher:
American Institute of Physics (AIP)Copyright Statement
Country of Publication:
United States
Language:
English

References (141)

Field theory and weak Euler-Lagrange equation for classical particle-field systems journal October 2014
Pattern formation in Hamiltonian systems with continuous spectra; a normal-form single-wave model preprint January 2013
Beyond Equilibrium Thermodynamics book January 2005
An Explicit Symplectic Integration Scheme for Plasma Simulations journal July 1993
Gradient Flows in the Normal and Kähler Metrics and Triple Bracket Generated Metriplectic Systems book January 2013
Study of conservation and recurrence of Runge–Kutta discontinuous Galerkin schemes for Vlasov–Poisson systems journal January 2013
Beyond Equilibrium Thermodynamics journal January 2006
On Bogoliubov's kinetic equation for a spatially homogeneous plasma journal July 1960
Covariant poisson brackets for classical fields journal June 1986
Energy-conserving numerical approximations for Vlasov plasmas journal August 1970
Variational algorithms for numerical simulation of collisionless plasma with point particles including electromagnetic interactions journal December 1972
A symplectic integration algorithm for separable Hamiltonian functions journal January 1991
The Hamiltonian structure of the Maxwell-Vlasov equations journal March 1982
A paradigm for joined Hamiltonian and dissipative systems journal January 1986
Application of Newton's method to Lagrangian mappings journal August 1989
Fourth-order symplectic integration journal May 1990
Integrators for Lie-Poisson dynamical systems journal May 1991
Symplectic Runge-Kutta and related methods: recent results journal November 1992
Self-consistent chaos in the beam-plasma instability journal February 1994
The Maxwell-Vlasov equations as a continuous hamiltonian system journal December 1980
Algebraic structure of the plasma quasilinear equations journal April 1982
Dissipative hamiltonian systems: A unifying principle journal February 1984
Bracket formulation for irreversible classical fields journal February 1984
Construction of higher order symplectic integrators journal November 1990
Quantum mechanics as a generalization of Nambu dynamics to the Weyl-Wigner formalism journal September 1991
On the stability of plasma in static equilibrium journal September 1958
The Hamiltonian description of incompressible fluid ellipsoids journal August 2009
Weakly nonlinear dynamics in noncanonical Hamiltonian systems with applications to fluids and plasmas journal May 2016
Finite Element Hodge for spline discrete differential forms. Application to the Vlasov–Poisson system journal May 2014
Application of the phase space action principle to finite-size particle plasma simulations in the drift-kinetic approximation journal November 2014
An introduction to Lie group integrators – basics, new developments and applications journal January 2014
Variational formulation of particle algorithms for kinetic plasma simulations journal July 2013
Hamiltonian splitting for the Vlasov–Maxwell equations journal February 2015
Comment on “Hamiltonian splitting for the Vlasov–Maxwell equations” journal September 2015
A mass, momentum, and energy conserving, fully implicit, scalable algorithm for the multi-dimensional, multi-species Rosenbluth–Fokker–Planck equation journal September 2015
Multi-dimensional, fully-implicit, spectral method for the Vlasov–Maxwell equations with exact conservation laws in discrete form journal November 2015
Variational integrators for reduced magnetohydrodynamics journal September 2016
Metriplectic structure, Leibniz dynamics and dissipative systems journal February 2007
Hamiltonian–Dirac simulated annealing: Application to the calculation of vortex states journal January 2011
Metriplectic framework for dissipative magneto-hydrodynamics journal March 2012
On the Hamiltonian formulation of incompressible ideal fluids and magnetohydrodynamics via Diracʼs theory of constraints journal January 2012
Hamiltonian formulation of the modified Hasegawa–Mima equation journal February 2014
Hamiltonian gyrokinetic Vlasov–Maxwell system journal September 2015
Extremal energy properties and construction of stable solutions of the Euler equations journal October 1989
Variational principles of guiding centre motion journal February 1983
A Lagrangian theory for nonlinear wave packets in a collisionless plasma journal April 1972
Lifting of the Vlasov–Maxwell bracket by Lie-transform method journal December 2016
Discrete mechanics and variational integrators journal May 2001
Finite element exterior calculus, homological techniques, and applications journal May 2006
Adjustment of vorticity fields with specified values of Casimir invariants as initial condition for simulated annealing of an incompressible, ideal neutral fluid and its MHD in two dimensions journal June 2015
Multiwave model for plasma–wave interaction journal October 2003
On the Stability of Plasma in Static Equilibrium journal January 1958
Hamiltonian and action principle formulations of plasma physics journal May 2005
A relativistic beam-plasma system with electromagnetic waves journal July 2005
Basics of turbulence computation for magnetically confined plasmas
  • Scott, Bruce D.; Benkadda, Sadruddin
  • TURBULENT TRANSPORT IN FUSION PLASMAS: First ITER International Summer School, AIP Conference Proceedings https://doi.org/10.1063/1.2939040
conference January 2008
Variational symplectic algorithm for guiding center dynamics and its application in tokamak geometry journal April 2009
On Hamiltonian and Action Principle Formulations of Plasma Dynamics
  • Morrison, P. J.; Eliasson, Bengt; Shukla, Padma K.
  • NEW DEVELOPMENTS IN NONLINEAR PLASMA PHYSICS: Proceedings of the 2009 ICTP Summer College on Plasma Physics and International Symposium on Cutting Edge Plasma Physics, AIP Conference Proceedings https://doi.org/10.1063/1.3266810
conference January 2009
Lectures on nonlinear orbit dynamics conference January 1982
Poisson brackets for fluids and plasmas conference January 1982
Singular Poisson tensors conference January 1982
Geometric integration of the Vlasov-Maxwell system with a variational particle-in-cell scheme journal August 2012
A general theory for gauge-free lifting journal January 2013
A variational multi-symplectic particle-in-cell algorithm with smoothing functions for the Vlasov-Maxwell system journal October 2013
Variational formulation of macro-particle plasma simulation algorithms journal May 2014
Action principles for extended magnetohydrodynamic models journal September 2014
Variational integration for ideal magnetohydrodynamics with built-in advection equations journal October 2014
Simulated annealing applied to two-dimensional low-beta reduced magnetohydrodynamics journal February 2015
Explicit high-order non-canonical symplectic particle-in-cell algorithms for Vlasov-Maxwell systems journal November 2015
Hamiltonian time integrators for Vlasov-Maxwell equations journal December 2015
Hamiltonian particle-in-cell methods for Vlasov-Maxwell equations journal September 2016
Hamiltonian magnetohydrodynamics: Lagrangian, Eulerian, and dynamically accessible stability—Examples with translation symmetry journal October 2016
Explicit high-order noncanonical symplectic algorithms for ideal two-fluid systems journal November 2016
Deterministic conservative solver for the inhomogeneous Fokker–Planck–Landau equation coupled with Poisson equation conference January 2016
Action principles for relativistic extended magnetohydrodynamics: A unified theory of magnetofluid models journal February 2017
Finite-dimensional collisionless kinetic theory journal March 2017
Beatification: Flattening the Poisson bracket for two-dimensional fluid and plasma theories journal March 2017
Lie series and invariant functions for analytic symplectic maps journal December 1976
A guiding center Hamiltonian: A new approach journal December 1979
The energy‐momentum tensor for the linearized Maxwell–Vlasov and kinetic guiding center theories journal February 1991
Action principles for the Vlasov equation journal April 1992
Hamiltonian formulation of reduced magnetohydrodynamics journal January 1984
Nonlinear instability and chaos in plasma wave–wave interactions. II. Numerical methods and results journal November 1995
Nonlinear instability and chaos in plasma wave–wave interactions. I. Introduction journal June 1995
Numerical observation of turbulence enhanced growth rates journal July 1997
Canonical symplectic particle-in-cell method for long-term large-scale simulations of the Vlasov–Maxwell equations journal December 2015
Kinetic Guiding-Center Equations for the Theory of Drift Instabilities and Anomalous Transport journal February 1984
An exactly conservative integrator for the n -body problem journal September 2002
Geometric integration for particle accelerators journal April 2006
Tokamak edge turbulence: background theory and computation journal June 2007
Symplectic integrators with adaptive time steps journal December 2011
What kinds of dynamics are there? Lie pseudogroups, dynamical systems and geometric integration journal October 2001
Symplectic integration of Hamiltonian systems journal May 1990
Simulated annealing for three-dimensional low-beta reduced MHD equilibria in cylindrical geometry journal March 2017
Thoughts on brackets and dissipation: Old and new journal May 2009
On the use of projectors for Hamiltonian systems and their relationship with Dirac brackets journal March 2013
A method for Hamiltonian truncation: a four-wave example journal March 2016
Finite element exterior calculus: from Hodge theory to numerical stability journal January 2010
Particle and bracket formulations of kinetic equations book January 1984
Local conservation laws for the Maxwell-Vlasov and collisionless kinetic guiding-center theories journal September 1985
Dynamics and thermodynamics of complex fluids.  I. Development of a general formalism journal December 1997
Variational Symplectic Integrator for Long-Time Simulations of the Guiding-Center Motion of Charged Particles in General Magnetic Fields journal January 2008
Collisionless Relaxation in Systems with Coulomb Interactions journal October 1970
Noncanonical Hamiltonian Density Formulation of Hydrodynamics and Ideal Magnetohydrodynamics journal September 1980
Explicit Lie-Poisson integration and the Euler equations journal November 1993
Spectral Reduction: A Statistical Description of Turbulence journal December 1999
Symplectic maps, variational principles, and transport journal July 1992
Hamiltonian description of the ideal fluid journal April 1998
Drift waves and transport journal April 1999
Generalized Hamiltonian Dynamics journal April 1973
Noncanonical Hamiltonian Density Formulation of Hydrodynamics and Ideal Magnetohydrodynamics. journal February 1982
Numerical solution of initial boundary value problems involving maxwell's equations in isotropic media journal May 1966
A Can0nical Integrati0n Technique journal August 1983
Variational Formulation of Macroparticle Models for Electromagnetic Plasma Simulations journal June 2014
Discontinuous Galerkin Methods for the Vlasov--Maxwell Equations journal January 2014
Exactly Conservative Integrators journal January 1998
Numerical Integration of Lie--Poisson Systems While Preserving Coadjoint Orbits and Energy journal January 2001
Discrete differential forms for computational modeling conference January 2006
Discrete differential forms for computational modeling conference January 2005
Discrete differential forms for computational modeling conference January 2008
Parameterization of Subgrid Scale Barotropic and Baroclinic Eddies in Quasi-geostrophic Models: Anticipated Potential Vorticity Method journal July 1985
Beyond Equilibrium Thermodynamics journal April 2005
Quantum Mechanics as a Generalization of Nambu Dynamics to the Weyl-Wigner Formalism journal February 1997
Entropy as a Metric Generator of Dissipation in Complete Metriplectic Systems journal August 2016
Generalized Hamiltonian Dynamics journal January 1950
The Heterognous Multiscale Methods journal January 2003
The local structure of Poisson manifolds journal January 1983
Errata and addenda: ``The local structure of Poisson manifolds'' journal January 1985
The Hamiltonian description of incompressible fluid ellipsoids text January 2008
Metriplectic Framework for Dissipative Magneto-Hydrodynamics text January 2011
On the Hamiltonian formulation of incompressible ideal fluids and magnetohydrodynamics via Dirac's theory of constraints text January 2011
On the use of projectors for Hamiltonian systems and their relationship with Dirac brackets text January 2012
Discontinuous Galerkin Methods for the Vlasov-Maxwell Equations preprint January 2013
Variational integration for ideal magnetohydrodynamics with built-in advection equations text January 2014
A method for Hamiltonian truncation: A four-wave example preprint January 2015
Weakly nonlinear dynamics in noncanonical Hamiltonian systems with applications to fluids and plasmas text January 2015
Explicit high-order noncanonical symplectic algorithms for ideal two-fluid systems text January 2016
Simulated annealing for three-dimensional low-beta reduced MHD equilibria in cylindrical geometry text January 2016
Beatification: Flattening the Poisson Bracket for Two-Dimensional Fluid and Plasma Theories text January 2016
Explicit Lie-Poisson integration and the Euler equations text January 1993
Spectral reduction: a statistical description of turbulence text January 1999
An Exactly Conservative Integrator for the n-Body Problem text January 2001

Cited By (16)

Structure-preserving integrators for dissipative systems based on reversible-irreversible splitting text January 2018
Continuum mechanics with torsion journal April 2019
Translationally symmetric extended MHD via Hamiltonian reduction: Energy-Casimir equilibria journal September 2017
Metriplectic integrators for the Landau collision operator journal October 2017
Eulerian variational formulations and momentum conservation laws for kinetic plasma systems journal October 2018
Calculation of large-aspect-ratio tokamak and toroidally-averaged stellarator equilibria of high-beta reduced magnetohydrodynamics via simulated annealing journal August 2018
Anti-symmetric plasma moment equations with conservative discrete counterparts journal June 2018
Adjoint approach to beam optics sensitivity based on Hamiltonian particle dynamics journal January 2019
Symmetries and local conservation laws of variational schemes for the surface plasmon polaritons journal April 2019
Test particles dynamics in the JOREK 3D non-linear MHD code and application to electron transport in a disruption simulation journal December 2017
Poisson structure of the three-dimensional Euler equations in Fourier space journal August 2019
Structure-preserving integrators for dissipative systems based on reversible– irreversible splitting
  • Shang, Xiaocheng; Öttinger, Hans Christian
  • Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 476, Issue 2234 https://doi.org/10.1098/rspa.2019.0446
journal February 2020
Structure-preserving integrators for dissipative systems based on reversible– irreversible splitting text January 2020
Calculation of large-aspect-ratio tokamak and toroidally-averaged stellarator equilibria of high-beta reduced magnetohydrodynamics via simulated annealing text January 2018
Adjoint Approach to Beam Optics Sensitivity Based on Hamiltonian Particle Dynamics preprint January 2018
Poisson Structure of the Three-Dimensional Euler Equations in Fourier Space text January 2018

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