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Title: Identification of a Structural Element in HIV-1 Gag Required for Virus Particle Assembly and Maturation

Journal Article · · mBio (Online)

ABSTRACT Late in the HIV-1 replication cycle, the viral structural protein Gag is targeted to virus assembly sites at the plasma membrane of infected cells. The capsid (CA) domain of Gag plays a critical role in the formation of the hexameric Gag lattice in the immature virion, and, during particle release, CA is cleaved from the Gag precursor by the viral protease and forms the conical core of the mature virion. A highly conserved Pro-Pro-Ile-Pro (PPIP) motif (CA residues 122 to 125) [PPIP(122–125)] in a loop connecting CA helices 6 and 7 resides at a 3-fold axis formed by neighboring hexamers in the immature Gag lattice. In this study, we characterized the role of this PPIP(122–125) loop in HIV-1 assembly and maturation. While mutations P123A and P125A were relatively well tolerated, mutation of P122 and I124 significantly impaired virus release, caused Gag processing defects, and abolished infectivity. X-ray crystallography indicated that the P122A and I124A mutations induce subtle changes in the structure of the mature CA lattice which were permissive forin vitroassembly of CA tubes. Transmission electron microscopy and cryo-electron tomography demonstrated that the P122A and I124A mutations induce severe structural defects in the immature Gag lattice and abrogate conical core formation. Propagation of the P122A and I124A mutants in T-cell lines led to the selection of compensatory mutations within CA. Our findings demonstrate that the CA PPIP(122–125) loop comprises a structural element critical for the formation of the immature Gag lattice. IMPORTANCECapsid (CA) plays multiple roles in the HIV-1 replication cycle. CA-CA domain interactions are responsible for multimerization of the Gag polyprotein at virus assembly sites, and in the mature virion, CA monomers assemble into a conical core that encapsidates the viral RNA genome. Multiple CA regions that contribute to the assembly and release of HIV-1 particles have been mapped and investigated. Here, we identified and characterized a Pro-rich loop in CA that is important for the formation of the immature Gag lattice. Changes in this region disrupt viral production and abrogate the formation of infectious, mature virions. Propagation of the mutants in culture led to the selection of second-site compensatory mutations within CA. These results expand our knowledge of the assembly and maturation steps in the viral replication cycle and may be relevant for development of antiviral drugs targeting CA.

Research Organization:
Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Organization:
National Institutes of Health (NIH)
OSTI ID:
1502210
Journal Information:
mBio (Online), Vol. 9, Issue 5; ISSN 2150-7511
Publisher:
American Society for Microbiology
Country of Publication:
United States
Language:
ENGLISH

References (59)

Virus Budding and the ESCRT Pathway journal September 2013
Homology-based Identification of Capsid Determinants That Protect HIV1 from Human TRIM5α Restriction journal December 2010
Suboptimal inhibition of protease activity in human immunodeficiency virus type 1: Effects on virion morphogenesis and RNA maturation journal September 2008
A Consensus View of ESCRT-Mediated Human Immunodeficiency Virus Type 1 Abscission journal September 2017
Overview of the CCP 4 suite and current developments journal March 2011
The structure and flexibility of conical HIV-1 capsids determined within intact virions journal December 2016
An atomic model of HIV-1 capsid-SP1 reveals structures regulating assembly and maturation journal July 2016
Extreme Genetic Fragility of the HIV-1 Capsid journal June 2013
Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics journal May 2013
Second site reversion of a mutation near the amino terminus of the HIV-1 capsid protein journal December 2013
Electron cryotomography of immature HIV-1 virions reveals the structure of the CA and SP1 Gag shells journal March 2007
In vitro protease cleavage and computer simulations reveal the HIV-1 capsid maturation pathway journal December 2016
Antiviral Inhibition of the HIV-1 Capsid Protein journal April 2003
Image reconstructions of helical assemblies of the HIV-1 CA protein journal September 2000
Proteolytic refolding of the HIV-1 capsid protein amino-terminus facilitates viral core assembly journal March 1998
HIV-1 Maturation Inhibitor Bevirimat Stabilizes the Immature Gag Lattice journal November 2010
PA-457: A potent HIV inhibitor that disrupts core condensation by targeting a late step in Gag processing journal October 2003
PHENIX : building new software for automated crystallographic structure determination journal October 2002
A Strongly Transdominant Mutation in the Human Immunodeficiency Virus Type 1 gag Gene Defines an Achilles Heel in the Virus Life Cycle journal June 2009
Protease Cleavage Leads to Formation of Mature Trimer Interface in HIV-1 Capsid journal August 2012
Alkyl Amine Bevirimat Derivatives Are Potent and Broadly Active HIV-1 Maturation Inhibitors journal October 2015
X-Ray Structures of the Hexameric Building Block of the HIV Capsid journal June 2009
Averaging of Electron Subtomograms and Random Conical Tilt Reconstructions through Likelihood Optimization journal December 2009
HIV-1 Assembly, Budding, and Maturation journal March 2012
Structure of the Carboxyl-Terminal Dimerization Domain of the HIV-1 Capsid Protein journal October 1997
The structural biology of HIV assembly journal April 2008
Scaling and assessment of data quality journal December 2005
Quenching protein dynamics interferes with HIV capsid maturation journal November 2017
HIV-1 assembly, release and maturation journal June 2015
XDS journal January 2010
Small-Molecule Inhibition of Human Immunodeficiency Virus Type 1 Replication by Specific Targeting of the Final Step of Virion Maturation journal December 2003
Maturation of the HIV-1 core by a non-diffusional phase transition journal January 2015
Atomic-level modelling of the HIV capsid journal January 2011
Distinct Effects of Two HIV-1 Capsid Assembly Inhibitor Families That Bind the Same Site within the N-Terminal Domain of the Viral CA Protein journal April 2012
Identification of an HIV-1 Mutation in Spacer Peptide 1 That Stabilizes the Immature CA-SP1 Lattice journal November 2015
A Two-Pronged Structural Analysis of Retroviral Maturation Indicates that Core Formation Proceeds by a Disassembly-Reassembly Pathway Rather than a Displacive Transition journal October 2013
Crystal structure of an HIV assembly and maturation switch journal July 2016
Structural and Functional Insights into the HIV-1 Maturation Inhibitor Binding Pocket journal November 2012
HIV-1 Gag Processing Intermediates Trans-dominantly Interfere with HIV-1 Infectivity journal August 2009
Structural basis for targeting HIV-1 Gag proteins to the plasma membrane for virus assembly journal July 2006
X-ray crystal structures of native HIV-1 capsid protein reveal conformational variability journal June 2015
Structural Changes in Influenza Virus at Low pH Characterized by Cryo-Electron Tomography journal January 2012
Coot model-building tools for molecular graphics journal November 2004
Susceptibility and adaptation to human TRIM5α alleles at positive selected sites in HIV-1 capsid journal July 2013
Functional Surfaces of the Human Immunodeficiency Virus Type 1 Capsid Protein journal May 2003
REFMAC 5 for the refinement of macromolecular crystal structures journal March 2011
Assembly and Analysis of Conical Models for the HIV-1 Core journal January 1999
In Vitro Assembly Properties of Purified Bacterially Expressed Capsid Proteins of Human Immunodeficiency Virus journal October 1997
Retrovirus maturation—an extraordinary structural transformation journal June 2016
The Mechanism of HIV-1 Core Assembly: Insights from Three-Dimensional Reconstructions of Authentic Virions journal January 2006
Structure of the immature HIV-1 capsid in intact virus particles at 8.8 Å resolution journal November 2014
The HIV Mutation Browser: A Resource for Human Immunodeficiency Virus Mutagenesis and Polymorphism Data journal December 2014
Noise Reduction in Electron Tomographic Reconstructions Using Nonlinear Anisotropic Diffusion journal September 2001
Computational resources for cryo-electron tomography in Bsoft journal March 2008
In Vitro Resistance to the Human Immunodeficiency Virus Type 1 Maturation Inhibitor PA-457 (Bevirimat) journal September 2006
Automated electron microscope tomography using robust prediction of specimen movements journal October 2005
Species-Specific Tropism Determinants in the Human Immunodeficiency Virus Type 1 Capsid journal May 2004
The capsid-spacer peptide 1 Gag processing intermediate is a dominant-negative inhibitor of HIV-1 maturation journal April 2010
How HIV-1 Gag assembles in cells: Putting together pieces of the puzzle journal November 2014

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