skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Expression of an endoglucanase–cellobiohydrolase fusion protein in Saccharomyces cerevisiae, Yarrowia lipolytica, and Lipomyces starkeyi

Journal Article · · Biotechnology for Biofuels

The low secretion levels of cellobiohydrolase I (CBHI) in yeasts are one of the key barriers preventing yeast from directly degrading and utilizing lignocellulose. To overcome this obstacle, we have explored the approach of genetically linking an easily secreted protein to CBHI, with CBHI being the last to be folded. The Trichoderma reesei eg2 (TrEGII) gene was selected as the leading gene due to its previously demonstrated outstanding secretion in yeast. To comprehensively characterize the effects of this fusion protein, we tested this hypothesis in three industrially relevant yeasts: Saccharomyces cerevisiae, Yarrowia lipolytica, and Lipomyces starkeyi. Our initial assays with the L. starkeyi secretome expressing differing TrEGII domains fused to a chimeric Talaromyces emersonii-T. reesei CBHI (TeTrCBHI) showed that the complete TrEGII enzyme, including the glycoside hydrolase (GH) 5 domain is required for increased expression level of the fusion protein when linked to CBHI. We found that this new construct (TrEGII-TeTrCBHI, Fusion 3) had an increased secretion level of at least threefold in L. starkeyi compared to the expression level of the chimeric TeTrCBHI. However, the same improvements were not observed when Fusion 3 construct was expressed in S. cerevisiae and Y. lipolytica. Digestion of pretreated corn stover with the secretomes of Y. lipolytica and L. starkeyi showed that conversion was much better using Y. lipolytica secretomes (50% versus 29%, respectively). In Y. lipolytica, TeTrCBHI performed better than the fusion construct. Furthermore, S. cerevisiae expression of Fusion 3 construct was poor and only minimal activity was observed when acting on the substrate, pNP-cellobiose. No activity was observed for the pNP-lactose substrate. Clearly, this approach is not universally applicable to all yeasts, but works in specific cases. With purified protein and soluble substrates, the exoglucanase activity of the GH7 domain embedded in the Fusion 3 construct in L. starkeyi was significantly higher than that of the GH7 domain in TeTrCBHI expressed alone. It is probable that a higher fraction of fusion construct CBHI is in an active form in Fusion 3 compared to just TeTrCBHI. We conclude that the strategy of leading TeTrCBHI expression with a linked TrEGII module significantly improved the expression of active CBHI in L. starkeyi.

Research Organization:
National Renewable Energy Laboratory (NREL), Golden, CO (United States)
Sponsoring Organization:
USDOE Office of Energy Efficiency and Renewable Energy (EERE), Office of Sustainable Transportation. Bioenergy Technologies Office (BETO); USDOE Office of Energy Efficiency and Renewable Energy (EERE), Sustainable Transportation Office. Bioenergy Technologies Office (BETO)
Grant/Contract Number:
AC36-08GO28308
OSTI ID:
1618741
Alternate ID(s):
OSTI ID: 1500069
Report Number(s):
NREL/JA-2700-71429; 322; PII: 1301
Journal Information:
Biotechnology for Biofuels, Journal Name: Biotechnology for Biofuels Vol. 11 Journal Issue: 1; ISSN 1754-6834
Publisher:
Springer Science + Business MediaCopyright Statement
Country of Publication:
Netherlands
Language:
English
Citation Metrics:
Cited by: 10 works
Citation information provided by
Web of Science

References (45)

Estimating number of transgene copies in transgenic rapeseed by real-time PCR assay withHMG I/Y as an endogenous reference gene journal September 2004
Conferring cellulose-degrading ability to Yarrowia lipolytica to facilitate a consolidated bioprocessing approach journal May 2017
Fungal Protein Production: Design and Production of Chimeric Proteins journal October 2011
Dilute-Sulfuric Acid Pretreatment of Corn Stover in Pilot-Scale Reactor: Investigation of Yields, Kinetics, and Enzymatic Digestibilities of Solids journal January 2003
Yarrowia lipolytica: A model and a tool to understand the mechanisms implicated in lipid accumulation journal June 2009
Lipid production by Lipomyces starkeyi cells in glucose solution without auxiliary nutrients journal April 2011
Microbial Cellulose Utilization: Fundamentals and Biotechnology journal September 2002
The eukaryotic initiation factor (eIF) 5 HEAT domain mediates multifactor assembly and scanning with distinct interfaces to eIF1, eIF2, eIF3, and eIF4G journal October 2005
Improved ethanol production at high temperature by consolidated bioprocessing using Saccharomyces cerevisiae strain engineered with artificial zinc finger protein journal December 2017
Engineering towards a complete heterologous cellulase secretome in Yarrowia lipolytica reveals its potential for consolidated bioprocessing journal October 2014
The carbohydrate-active enzymes database (CAZy) in 2013 journal November 2013
Protein folding and conformational stress in microbial cells producing recombinant proteins: a host comparative overview journal January 2008
Fungal cellulases journal February 1992
Expression and secretion of fungal endoglucanase II and chimeric cellobiohydrolase I in the oleaginous yeast Lipomyces starkeyi journal July 2017
Structure and function of the Clostridium thermocellum cellobiohydrolase A X1-module repeat: enhancement through stabilization of the CbhA complex journal February 2012
Binding modules alter the activity of chimeric cellulases: Effects of biomass pretreatment and enzyme source journal July 2010
1-Aminocyclopropane-1-Carboxylate Oxidase 2 Reduction Effects on Physical and Physiological Responses of Eksotika Papaya journal September 2013
Revealing Nature's Cellulase Diversity The Digestion Mechanism of Caldicellulosiruptor bescii CelA journal December 2013
Development of a bifunctional xylanase-cellulase chimera with enhanced activity on rice and barley straws using a modular xylanase and an endoglucanase procured from camel rumen metagenome journal August 2017
Identification of oleaginous yeast strains able to accumulate high intracellular lipids when cultivated in alkaline pretreated corn stover journal July 2014
Consolidated bioprocessing of cellulosic biomass: an update journal October 2005
Characterization of Trichoderma reesei cellobiohydrolase Cel7A secreted from Pichia pastoris using two different promoters journal January 2000
High level secretion of cellobiohydrolases by Saccharomyces cerevisiae journal January 2011
Phytochrome RNAi enhances major fibre quality and agronomic traits of the cotton Gossypium hirsutum L journal January 2014
Oil Production from Yarrowia lipolytica Po1g Using Rice Bran Hydrolysate journal January 2012
Development of yeast cell factories for consolidated bioprocessing of lignocellulose to bioethanol through cell surface engineering journal November 2012
Expressing accessory proteins in cellulolytic Yarrowia lipolytica to improve the conversion yield of recalcitrant cellulose journal December 2017
Lipid accumulation from glucose and xylose in an engineered, naturally oleaginous strain of Saccharomyces cerevisiae journal June 2018
An optimized transformation protocol for Lipomyces starkeyi journal April 2014
Limited proteolysis of the cellobiohydrolase I from Trichoderma reesei: Separation of functional domains journal August 1986
Medium optimization for lipid production through co-fermentation of glucose and xylose by the oleaginous yeastLipomyces starkeyi journal May 2008
Interplay between Clostridium thermocellum Family 48 and Family 9 Cellulases in Cellulosomal versus Noncellulosomal States journal March 2010
Canola engineered with a microalgal polyketide synthase-like system produces oil enriched in docosahexaenoic acid journal July 2016
Use of Label-Free Quantitative Proteomics To Distinguish the Secreted Cellulolytic Systems of Caldicellulosiruptor bescii and Caldicellulosiruptor obsidiansis journal April 2011
An efficient system for high-level expression and easy purification of authentic recombinant proteins journal May 2004
Expression and High-Level Secretion of Trichoderma reesei Endoglucanase I in Yarrowia lipolytica journal January 2000
Recent progress in consolidated bioprocessing journal June 2012
Trichoderma reesei RUT-C30 - thirty years of strain improvement journal October 2011
Generating bifunctional fusion enzymes composed of heat-active endoglucanase (Cel5A) and endoxylanase (XylT) journal September 2014
Cellobiohydrolase secretion by yeast: Current state and prospects for improvement journal January 2013
Challenges and advances in the heterologous expression of cellulolytic enzymes: a review journal October 2014
The three-dimensional crystal structure of the catalytic core of cellobiohydrolase I from Trichoderma reesei journal July 1994
Construction of cellobiose-growing and fermenting Saccharomyces cerevisiae strains journal November 2005
Foreign gene expression in yeast: a review journal June 1992
Design and Production of Active Cellulosome Chimeras: SELECTIVE INCORPORATION OF DOCKERIN-CONTAINING ENZYMES INTO DEFINED FUNCTIONAL COMPLEXES journal April 2001