Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

In Vitro Enzymatic Depolymerization of Lignin with Release of Syringyl, Guaiacyl, and Tricin Units

Journal Article · · Applied and Environmental Microbiology
DOI:https://doi.org/10.1128/aem.02076-17· OSTI ID:1499013

ABSTRACT

New environmentally sound technologies are needed to derive valuable compounds from renewable resources. Lignin, an abundant polymer in terrestrial plants comprised predominantly of guaiacyl and syringyl monoaromatic phenylpropanoid units, is a potential natural source of aromatic compounds. In addition, the plant secondary metabolite tricin is a recently discovered and moderately abundant flavonoid in grasses. The most prevalent interunit linkage between guaiacyl, syringyl, and tricin units is the β-ether linkage. Previous studies have shown that bacterial β-etherase pathway enzymes catalyze glutathione-dependent cleavage of β-ether bonds in dimeric β-ether lignin model compounds. To date, however, it remains unclear whether the known β-etherase enzymes are active on lignin polymers. Here we report on enzymes that catalyze β-ether cleavage from bona fide lignin, under conditions that recycle the cosubstrates NAD+and glutathione. Guaiacyl, syringyl, and tricin derivatives were identified as reaction products when different model compounds or lignin fractions were used as substrates. These results demonstrate anin vitroenzymatic system that can recycle cosubstrates while releasing aromatic monomers from model compounds as well as natural and engineered lignin oligomers. These findings can improve the ability to produce valuable aromatic compounds from a renewable resource like lignin.

Many bacteria are predicted to contain enzymes that could convert renewable carbon sources into substitutes for compounds that are derived from petroleum. The β-etherase pathway present in sphingomonad bacteria could cleave the abundant β–O–4-aryl ether bonds in plant lignin, releasing a biobased source of aromatic compounds for the chemical industry. However, the activity of these enzymes on the complex aromatic oligomers found in plant lignin is unknown. Furthermore we demonstrate biodegradation of lignin polymers using a minimal set of β-etherase pathway enzymes, the ability to recycle needed cofactors (glutathione and NAD+)in vitro, and the release of guaiacyl, syringyl, and tricin as depolymerized products from lignin. These observations provide critical evidence for the use and future optimization of these bacterial β-etherase pathway enzymes for industrial-level biotechnological applications designed to derive high-value monomeric aromatic compounds from lignin.

Research Organization:
Univ. of Wisconsin, Madison, WI (United States)
Sponsoring Organization:
USDOE
Grant/Contract Number:
FC02-07ER64494
OSTI ID:
1499013
Journal Information:
Applied and Environmental Microbiology, Journal Name: Applied and Environmental Microbiology Journal Issue: 3 Vol. 84; ISSN 0099-2240
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (42)

Multi-step biocatalytic depolymerization of lignin journal June 2017
Detection and localization of a new enzyme catalyzing the β-aryl ether cleavage in the soil bacterium ( Pseudomonas paucimobilis SYK-6) journal June 1989
A bacterial enzyme degrading the model lignin compound β-etherase is a member of the glutathione- S -transferase superfamily journal May 1993
Biochemical transformation of lignin for deriving valued commodities from lignocellulose journal June 2017
A Group of Sequence-Related Sphingomonad Enzymes Catalyzes Cleavage of β-Aryl Ether Linkages in Lignin β-Guaiacyl and β-Syringyl Ether Dimers journal October 2014
Structural Elements of Lignin journal September 1957
Are Lignins Optically Active? journal August 1999
Formic-acid-induced depolymerization of oxidized lignin to aromatics journal November 2014
Structural Basis of Stereospecificity in the Bacterial Enzymatic Cleavage of β-Aryl Ether Bonds in Lignin journal December 2015
Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin β-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6 journal March 2016
A comprehensive review on vanilla flavor: Extraction, isolation and quantification of vanillin and others constituents journal January 2008
Construction of long DNA molecules using long PCR-based fusion of several fragments simultaneously journal January 2004
Maize Tricin-Oligolignol Metabolites and their Implications for Monocot Lignification journal April 2016
Roles of the Enantioselective Glutathione S-Transferases in Cleavage of  -Aryl Ether journal March 2003
Lignin: Occurrence, Biogenesis and Biodegradation journal June 1990
Characterization of the Cα-Dehydrogenase Gene Involved in the Cleavage of β-Aryl Ether by Pseudomonas paucimobilis journal January 1993
Genetic and Biochemical Investigations on Bacterial Catabolic Pathways for Lignin-Derived Aromatic Compounds journal January 2007
Methods in 2012, part 2 journal July 2012
Guaiacylglycerol and its beta-Guaiacyl Ether. journal January 1955
Enzymatic Specific Production and Chemical Functionalization of Phenylpropanone Platform Monomers from Lignin journal December 2016
Lignin chemistry?past, present and future journal January 1977
Erythro/threo ratio ofβ-O-4 structures as an important structural characteristic of lignin. I: Improvement of ozonation method for the quantitative analysis of lignin side-chain structure journal June 2002
A bacterial enzyme degrading the model lignin compound β-etherase is a member of the glutathione- S -transferase superfamily journal May 1993
Identification of the third glutathione S-transferase gene involved in the stereospecific cleavage of β-aryl ether in Sphingobium sp. strain SYK-6 journal November 2010
Protein production by auto-induction in high-density shaking cultures journal May 2005
Convenient synthesis of chiral lignin model compounds via optical resolution: four stereoisomers of guaiacylglycerol-β-guaiacyl ether and both enantiomers of 3-hydroxy-1-(4-hydroxy-3-methoxyphenyl)-2-(2-methoxyphenoxy)-propan-1-one (erone) journal February 2012
Chemoselective Metal-Free Aerobic Alcohol Oxidation in Lignin journal April 2013
Structural Characterization of Wheat Straw Lignin as Revealed by Analytical Pyrolysis, 2D-NMR, and Reductive Cleavage Methods journal December 2011
Cascade enzymatic cleavage of the β-O-4 linkage in a lignin model compound journal January 2016
Enzymatic cleavage of lignin β-O-4 aryl ether bonds via net internal hydrogen transfer journal January 2013
Stereochemical Features of Glutathione-dependent Enzymes in the Sphingobium sp. Strain SYK-6 β-Aryl Etherase Pathway journal February 2014
Structural Basis of Stereospecificity in the Bacterial Enzymatic Cleavage of β-Aryl Ether Bonds in Lignin journal December 2015
Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin β-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6 journal March 2016
The Effects on Lignin Structure of Overexpression of Ferulate 5-Hydroxylase in Hybrid Poplar 1 journal April 2009
Tricin, a Flavonoid Monomer in Monocot Lignification journal February 2015
Formaldehyde stabilization facilitates lignin monomer production during biomass depolymerization journal October 2016
Identification of Three Alcohol Dehydrogenase Genes Involved in the Stereospecific Catabolism of Arylglycerol- -Aryl Ether by Sphingobium sp. Strain SYK-6 journal June 2009
Roles of the Enantioselective Glutathione S-Transferases in Cleavage of  -Aryl Ether journal March 2003
Lignin Structure and Morphological Distribution in Plant Cell Walls book January 1980
The Erythro/Threo Ratio of β-O-4 Structures as an Important Structural Characteristic of Lignin. Part 2. Changes in Erythro/Threo (E/T) Ratio of β-O-4 Structures during Delignification Reactions journal June 2002
Overlap extension PCR cloning: a simple and reliable way to create recombinant plasmids journal June 2010
Gene Splicing by Overlap Extension: Tailor-Made Genes Using the Polymerase Chain Reaction journal March 2013

Cited By (4)

Lignin Depolymerization to BTXs book September 2019
Microbial β-etherases and glutathione lyases for lignin valorisation in biorefineries: current state and future perspectives journal May 2018
Lignin Depolymerization to BTXs journal September 2019
A method for high-throughput screening hydrolase of lignin β-aryl ether linkage from directed evolution by glutathione (GSH) assay journal May 2020

Similar Records

Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin β-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6
Journal Article · Wed Mar 02 23:00:00 EST 2016 · Journal of Biological Chemistry · OSTI ID:1379331

Catalytic Mechanism of Aryl-Ether Bond Cleavage in Lignin by LigF and LigG
Journal Article · Mon Nov 04 23:00:00 EST 2019 · Journal of Physical Chemistry. B · OSTI ID:1578254