Translation initiation and the fate of bacterial mRNAs
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November 2006 |
Comparative transcriptome analysis between csrA-disruption Clostridium acetobutylicum and its parent strain
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January 2015 |
Escherichia coli Ribosomal Protein S1 Unfolds Structured mRNAs Onto the Ribosome for Active Translation Initiation
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December 2013 |
NADP-Specific Electron-Bifurcating [FeFe]-Hydrogenase in a Functional Complex with Formate Dehydrogenase in Clostridium autoethanogenum Grown on CO
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July 2013 |
CRISPR/Cas9-Based Efficient Genome Editing in Clostridium ljungdahlii , an Autotrophic Gas-Fermenting Bacterium
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June 2016 |
A Life with Acetogens, Thermophiles, and Cellulolytic Anaerobes
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October 2009 |
mRNA Decay in Escherichia coli Comes of Age
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September 2002 |
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
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January 2009 |
AU-Rich Sequences within 5' Untranslated Leaders Enhance Translation and Stabilize mRNA in Escherichia coli
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February 2005 |
The ribosome in action: Tuning of translational efficiency and protein folding: The Ribosome in Action
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June 2016 |
S1 ribosomal protein and the interplay between translation and mRNA decay
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June 2011 |
Pervasive transcription: illuminating the dark matter of bacterial transcriptomes
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July 2014 |
The effect of heterogeneous Transcription Start Sites (TSS) on the translatome: implications for the mammalian cellular phenotype
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November 2015 |
Architecture of a transcribing-translating expressome
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April 2017 |
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
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November 2013 |
mRNA-programmed translation pauses in the targeting of E. coli membrane proteins
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August 2014 |
Transcriptome-wide measurement of translation by ribosome profiling
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August 2017 |
Datura genome reveals duplications of psychoactive alkaloid biosynthetic genes and high mutation rate following tissue culture
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March 2021 |
A streamlined ribosome profiling protocol for the characterization of microorganisms
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June 2015 |
The MEME Suite
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May 2015 |
Ribosome profiling: new views of translation, from single codons to genome scale
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January 2014 |
Translational control of prokaryotic gene expression
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January 1990 |
Massive functional mapping of a 5′-UTR by saturation mutagenesis, phenotypic sorting and deep sequencing
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April 2013 |
Transcriptomic profiles of Clostridium ljungdahlii during lithotrophic growth with syngas or H2 and CO2 compared to organotrophic growth with fructose
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October 2017 |
Analysis of the Core Genome and Pan-Genome of Autotrophic Acetogenic Bacteria
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September 2016 |
Dynamic evolution of translation initiation mechanisms in prokaryotes
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March 2010 |
Nascent Membrane and Secretory Proteins Differ in FRET-Detected Folding Far inside the Ribosome and in Their Exposure to Ribosomal Proteins
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March 2004 |
The RAST Server: Rapid Annotations using Subsystems Technology
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January 2008 |
Pleiotropic Regulation of Central Carbohydrate Metabolism in Escherichia coli via the Gene csrA
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December 1995 |
Growth rate regulation of translation initiation factor IF3 biosynthesis in Escherichia coli.
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June 1991 |
Changes in translational efficiency is a dominant regulatory mechanism in the environmental response of bacteria
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January 2013 |
α-Helical nascent polypeptide chains visualized within distinct regions of the ribosomal exit tunnel
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February 2010 |
An Ancient Pathway Combining Carbon Dioxide Fixation with the Generation and Utilization of a Sodium Ion Gradient for ATP Synthesis
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March 2012 |
Clostridium ljungdahlii represents a microbial production platform based on syngas
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July 2010 |
Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen
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January 2001 |
DOOR: a database for prokaryotic operons
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November 2008 |
Molecular mechanisms of translational control
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October 2004 |
Application of sorting and next generation sequencing to study 5΄-UTR influence on translation efficiency in Escherichia coli
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November 2016 |
The ClosTron: A universal gene knock-out system for the genus Clostridium
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September 2007 |
Kinetic control of translation initiation in bacteria
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March 2012 |
Multi-omic data integration enables discovery of hidden biological regularities
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October 2016 |
Genetically encoded chemical crosslinking of RNA in vivo
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October 2022 |
Whole genome sequence and manual annotation of Clostridium autoethanogenum, an industrially relevant bacterium
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December 2015 |
The anti-Shine–Dalgarno sequence drives translational pausing and codon choice in bacteria
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March 2012 |
ViennaRNA Package 2.0
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November 2011 |
Multiple activities of RNA-binding proteins S1 and Hfq
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July 2012 |
S6:S18 ribosomal protein complex interacts with a structural motif present in its own mRNA
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August 2013 |
Identification and molecular characterization of csrA, a pleiotropic gene from Escherichia coli that affects glycogen biosynthesis, gluconeogenesis, cell size, and surface properties.
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August 1993 |
Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
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April 2009 |
Energy Conservation Associated with Ethanol Formation from H 2 and CO 2 in Clostridium autoethanogenum Involving Electron Bifurcation
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July 2015 |
Local slowdown of translation by nonoptimal codons promotes nascent-chain recognition by SRP in vivo
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November 2014 |
IL-1-dependent enteric gliosis guides intestinal inflammation and dysmotility and modulates macrophage function
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August 2022 |
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
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December 2014 |
A novel transcript variant of human G-protein coupled estrogen receptor
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March 2021 |
The RNA Molecule CsrB Binds to the Global Regulatory Protein CsrA and Antagonizes Its Activity in Escherichia coli
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July 1997 |
Forces that influence the evolution of codon bias
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April 2010 |
SPOCD1 is an essential executor of piRNA-directed de novo DNA methylation
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July 2020 |
Differential Stoichiometry among Core Ribosomal Proteins
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November 2015 |
The Rnf Complex of Clostridium ljungdahlii Is a Proton-Translocating Ferredoxin:NAD+ Oxidoreductase Essential for Autotrophic Growth
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December 2012 |
RNA-seq-based comparative transcriptome analysis of the syngas-utilizing bacterium Clostridium ljungdahlii DSM 13528 grown autotrophically and heterotrophically
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January 2013 |
WebLogo: A Sequence Logo Generator
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May 2004 |
Trash to treasure: production of biofuels and commodity chemicals via syngas fermenting microorganisms
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June 2014 |
Circuitry linking the Csr and stringent response global regulatory systems: Csr and stringent response systems
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May 2011 |
Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide
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July 2017 |
Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii
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January 2013 |
The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications
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January 1987 |
AGO-bound mature miRNAs are oligouridylated by TUTs and subsequently degraded by DIS3L2
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June 2020 |
The dynamic transcriptional and translational landscape of the model antibiotic producer Streptomyces coelicolor A3(2)
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June 2016 |
The Sequence Alignment/Map format and SAMtools
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June 2009 |
featureCounts: An efficient general-purpose program for assigning sequence reads to genomic features
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January 2013 |
Allosteric inhibition of methylenetetrahydrofolate reductase by adenosylmethionine. Effects of adenosylmethionine and NADPH on the equilibrium between active and inactive forms of the enzyme and on the kinetics of approach to equilibrium.
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February 1987 |