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Title: Single-cell genomics for the masses

Journal Article · · Nature Biotechnology
DOI:https://doi.org/10.1038/nbt.3914· OSTI ID:1439222

In this issue of Nature Biotechnology, Lan et al. describe a new tool in the toolkit for studying uncultivated microbial communities, enabling orders of magnitude higher single cell genome throughput than previous methods. This is achieved by a complex droplet microfluidics workflow encompassing steps from physical cell isolation through genome sequencing, producing tens of thousands of lowcoverage genomes from individual cells.

Research Organization:
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
SC-23.2 USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23). Biological Systems Science Division
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1439222
Journal Information:
Nature Biotechnology, Vol. 35, Issue 7; ISSN 1087-0156
Publisher:
Springer NatureCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 2 works
Citation information provided by
Web of Science

References (9)

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Reconstructing each cell's genome within complex microbial communities—dream or reality? journal January 2015
Droplet barcoding for massively parallel single-molecule deep sequencing journal June 2016
Decontamination of MDA Reagents for Single Cell Whole Genome Amplification journal October 2011
Multi-Omics of Single Cells: Strategies and Applications journal August 2016
Accurate, multi-kb reads resolve complex populations and detect rare microorganisms journal February 2015
Single-cell genome sequencing at ultra-high-throughput with microfluidic droplet barcoding journal May 2017
Genomic sequencing of single microbial cells from environmental samples journal June 2008