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Germline Chd8 haploinsufficiency alters brain development in mouse

Journal Article · · Nature Neuroscience
DOI:https://doi.org/10.1038/nn.4592· OSTI ID:1436635
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  1. Univ. of California, Davis, CA (United States). Dept. of Psychiatry and Behavioral Sciences. Dept. of Neurobiology, Physiology and Behavior
  2. The Hospital for Sick Children, Toronto, ON (Canada). Mouse Imaging Centre
  3. Univ. of California, Davis, CA (United States). Dept. of Psychiatry and Behavioral Sciences. MIND Inst. School of Medicine
  4. Univ. of California, Davis, Sacramento, CA (United States). Dept. of Pathology and Laboratory Medicine. Shriners Hospitals for Children. Inst. for Pediatric Regenerative Medicine
  5. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Functional Genomics Dept.
  6. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Functional Genomics Dept.; USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of California, Merced, CA (United States). School of Natural Sciences
  7. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Functional Genomics Dept.; USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
  8. The Hospital for Sick Children, Toronto, ON (Canada). Mouse Imaging Centre; Univ. of Toronto, ON (Canada). Dept. of Medical Biophysics
The chromatin remodeling gene CHD8 represents a central node in neurodevelopmental gene networks implicated in autism. In this paper, we examined the impact of germline heterozygous frameshift Chd8 mutation on neurodevelopment in mice. Chd8+/del5 mice displayed normal social interactions with no repetitive behaviors but exhibited cognitive impairment correlated with increased regional brain volume, validating that phenotypes of Chd8+/del5 mice overlap pathology reported in humans with CHD8 mutations. We applied network analysis to characterize neurodevelopmental gene expression, revealing widespread transcriptional changes in Chd8+/del5 mice across pathways disrupted in neurodevelopmental disorders, including neurogenesis, synaptic processes and neuroimmune signaling. We identified a co-expression module with peak expression in early brain development featuring dysregulation of RNA processing, chromatin remodeling and cell-cycle genes enriched for promoter binding by Chd8, and we validated increased neuronal proliferation and developmental splicing perturbation in Chd8+/del5 mice. Finally, this integrative analysis offers an initial picture of the consequences of Chd8 haploinsufficiency for brain development.
Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
Canadian Inst. for Health Research (CIHR); National Council for Scientific and Technological Development (CNPq) (Brazil); National Inst. of Health (NIH) (United States); USDOE; Univ. of California, Davis (United States)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1436635
Journal Information:
Nature Neuroscience, Journal Name: Nature Neuroscience Journal Issue: 8 Vol. 20; ISSN 1097-6256
Publisher:
Springer NatureCopyright Statement
Country of Publication:
United States
Language:
English

References (101)

Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging journal September 1999
FMR1 premutation and full mutation molecular mechanisms related to autism journal May 2011
Behavioural methods used in rodent models of autism spectrum disorders: Current standards and new developments journal August 2013
FMRP Stalls Ribosomal Translocation on mRNAs Linked to Synaptic Function and Autism journal July 2011
Coexpression Networks Implicate Human Midfetal Deep Cortical Projection Neurons in the Pathogenesis of Autism journal November 2013
Cell-Type-Specific Alternative Splicing Governs Cell Fate in the Developing Cerebral Cortex journal August 2016
A reproducible evaluation of ANTs similarity metric performance in brain image registration journal February 2011
Corticothalamic Projection Neuron Development beyond Subtype Specification: Fog2 and Intersectional Controls Regulate Intraclass Neuronal Diversity journal July 2016
Isolated heart perfusion according to Langendorff—Still viable in the new millennium journal March 2007
Transcriptomic analysis of autistic brain reveals convergent molecular pathology journal May 2011
Synaptic, transcriptional and chromatin genes disrupted in autism journal October 2014
Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism journal December 2016
Chd8 mediates cortical neurogenesis via transcriptional regulation of cell cycle and Wnt signaling journal October 2016
Distinct molecular phenotype of inflammatory breast cancer compared to non-inflammatory breast cancer using Affymetrix-based genome-wide gene-expression analysis journal September 2007
Mouse neurexin-1  deletion causes correlated electrophysiological and behavioral changes consistent with cognitive impairments journal October 2009
The discovery of integrated gene networks for autism and related disorders journal November 2014
Delay and trace fear conditioning in C57BL/6 and DBA/2 mice: issues of measurement and performance journal July 2014
Anatomical phenotyping in the brain and skull of a mutant mouse by magnetic resonance imaging and computed tomography journal February 2006
Full UPF3B function is critical for neuronal differentiation of neural stem cells journal May 2015
Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging journal September 1999
Using MACS to Identify Peaks from ChIP-Seq Data journal June 2011
Genetic Effects on Cerebellar Structure Across Mouse Models of Autism Using a Magnetic Resonance Imaging Atlas: MRI of genetic mouse model's cerebellum journal October 2013
Minimal aberrant behavioral phenotypes of neuroligin-3 R451C knockin mice journal June 2008
Loss of neural recognition molecule NB-3 delays the normal projection and terminal branching of developing corticospinal tract axons in the mouse journal February 2012
SPARC-like 1 (SC1) is a diversely expressed and developmentally regulated matricellular protein that does not compensate for the absence of SPARC in the CNS journal June 2012
Development of MRI-based atlases of non-human brains: Development of MRI brain atlases journal October 2014
Agenesis of the corpus callosum in Nogo receptor deficient mice: CC Agenesis in Nogo Receptor Deficient Mice journal July 2016
Fast spin-echo for multiple mouse magnetic resonance phenotyping journal January 2005
Thresholding of Statistical Maps in Functional Neuroimaging Using the False Discovery Rate journal April 2002
Marble burying reflects a repetitive and perseverative behavior more than novelty-induced anxiety journal February 2009
Group I metabotropic glutamate receptor antagonists alter select behaviors in a mouse model for fragile X syndrome journal June 2011
Behavioral and functional analysis of mouse phenotype: SHIRPA, a proposed protocol for comprehensive phenotype assessment journal October 1997
Basic local alignment search tool journal October 1990
Integrative Functional Genomic Analyses Implicate Specific Molecular Pathways and Circuits in Autism journal November 2013
Rapid and Pervasive Changes in Genome-wide Enhancer Usage during Mammalian Development journal December 2013
Disruptive CHD8 Mutations Define a Subtype of Autism Early in Development journal July 2014
Chd8 Mutation Leads to Autistic-like Behaviors and Impaired Striatal Circuits journal April 2017
First glimpses of the neurobiology of autism spectrum disorder journal August 2015
Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain journal February 2008
Cortical thickness measured from MRI in the YAC128 mouse model of Huntington's disease journal June 2008
High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice journal August 2008
Preparation of fixed mouse brains for MRI journal April 2012
Insights into Autism Spectrum Disorder Genomic Architecture and Biology from 71 Risk Loci journal September 2015
Cytoplasmic Rbfox1 Regulates the Expression of Synaptic and Autism-Related Genes journal January 2016
Hallmarks of Alzheimer’s Disease in Stem-Cell-Derived Human Neurons Transplanted into Mouse Brain journal March 2017
Influence of stimulant-induced hyperactivity on social approach in the BTBR mouse model of autism journal May 2013
Low stress reactivity and neuroendocrine factors in the BTBR T+tf/J mouse model of autism journal December 2010
Behavioral assessment of NIH Swiss mice acutely intoxicated with tetramethylenedisulfotetramine journal January 2015
Mutations of the UPF3B gene, which encodes a protein widely expressed in neurons, are associated with nonspecific mental retardation with or without autism journal February 2009
De novo mutations in schizophrenia implicate chromatin remodeling and support a genetic overlap with autism and intellectual disability journal April 2014
Clustering autism: using neuroanatomical differences in 26 mouse models to gain insight into the heterogeneity journal September 2014
Chromatin remodelling during development journal January 2010
The contribution of de novo coding mutations to autism spectrum disorder journal October 2014
CHD8 haploinsufficiency results in autistic-like phenotypes in mice journal September 2016
Loss of Wdfy3 in mice alters cerebral cortical neurogenesis reflecting aspects of the autism pathology journal September 2014
The autism-associated chromatin modifier CHD8 regulates other autism risk genes during human neurodevelopment journal March 2015
Analysis and design of RNA sequencing experiments for identifying isoform regulation journal November 2010
Fiji: an open-source platform for biological-image analysis journal June 2012
GABAB Receptor Agonist R-Baclofen Reverses Social Deficits and Reduces Repetitive Behavior in Two Mouse Models of Autism journal March 2015
From neural development to cognition: unexpected roles for chromatin journal April 2013
Chromatin modifiers and remodellers: regulators of cellular differentiation journal December 2013
Genetic studies in intellectual disability and related disorders journal October 2015
Behavioural phenotyping assays for mouse models of autism journal July 2010
Androgen receptor and its splice variant, AR-V7, differentially induce mRNA splicing in prostate cancer cells journal January 2021
Long-term exposure to intranasal oxytocin in a mouse autism model journal November 2014
CHD8 regulates neurodevelopmental pathways associated with autism spectrum disorder in neural progenitors journal October 2014
Fast and accurate short read alignment with Burrows-Wheeler transform journal May 2009
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data journal November 2009
RSeQC: quality control of RNA-seq experiments journal June 2012
STAR: ultrafast universal RNA-seq aligner journal October 2012
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features journal November 2013
STRING 8--a global view on proteins and their functional interactions in 630 organisms journal January 2009
The Reactome pathway knowledgebase journal November 2013
RSAT 2015: Regulatory Sequence Analysis Tools journal April 2015
The Reactome Pathway Knowledgebase journal November 2017
The reactome pathway knowledgebase journal November 2019
Automatic 3D Intersubject Registration of MR Volumetric Data in Standardized Talairach Space journal January 1994
16p11.2 Deletion mice display cognitive deficits in touchscreen learning and novelty recognition tasks journal November 2015
Unusual repertoire of vocalizations in adult BTBR T+tf/J mice during three types of social encounters journal July 2010
RNA-Guided Human Genome Engineering via Cas9 journal January 2013
Negative Allosteric Modulation of the mGluR5 Receptor Reduces Repetitive Behaviors and Rescues Social Deficits in Mouse Models of Autism journal April 2012
Reversal of Disease-Related Pathologies in the Fragile X Mouse Model by Selective Activation of GABAB Receptors with Arbaclofen journal September 2012
Early Embryonic Death in Mice Lacking the  -Catenin-Binding Protein Duplin journal September 2004
Thresholding of Statistical Maps in Functional Neuroimaging Using the False Discovery Rate text January 2004
Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool journal January 2013
WGCNA: an R package for weighted correlation network analysis journal December 2008
Gene ontology analysis for RNA-seq: accounting for selection bias journal January 2010
The adipogenic transcriptional cofactor ZNF638 interacts with splicing regulators and influences alternative splicing journal July 2014
Glucose Intolerance in Aging Male IGFBP-3 Transgenic Mice: Differential Effects of Human IGFBP-3 and Its Mutant IGFBP-3 Devoid of IGF Binding Ability journal February 2015
Proteins Encoded in Genomic Regions Associated with Immune-Mediated Disease Physically Interact and Suggest Underlying Biology journal January 2011
Comprehensive Analysis of the 16p11.2 Deletion and Null Cntnap2 Mouse Models of Autism Spectrum Disorder journal August 2015
Insights into Autism Spectrum Disorder Genomic Architecture and Biology from 71 Risk Loci dataset January 2016
A Novel and Multivalent Role of Pax6 in Cerebellar Development journal August 2016
In Vivo Magnetic Resonance Imaging and Semiautomated Image Analysis Extend the Brain Phenotype for cdf/cdf Mice journal April 2006
A General Framework for Weighted Gene Co-Expression Network Analysis journal January 2005
Chd8 Mutation Leads to Autistic-like Behaviors and Impaired Striatal Circuits text January 2017
featureCounts: An efficient general-purpose program for assigning sequence reads to genomic features text January 2013
STRING 8--a global view on proteins and their functional interactions in 630 organisms text January 2009
Thresholding of Statistical Maps in Functional Neuroimaging Using the False Discovery Rate text January 2017
Thresholding of Statistical Maps in Functional Neuroimaging Using the False Discovery Rate text January 2017
Comprehensive Analysis of the 16p11.2 Deletion and Null Cntnap2 Mouse Models of Autism Spectrum Disorder text January 2015

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Pleiotropic Meta-Analysis of Cognition, Education, and Schizophrenia Differentiates Roles of Early Neurodevelopmental and Adult Synaptic Pathways journal August 2019
The potential association of psychoactive pharmaceuticals in the environment with human neurological disorders journal September 2019
Setd5 haploinsufficiency alters neuronal network connectivity and leads to autistic-like behaviors in mice journal January 2019
Pten haploinsufficiency disrupts scaling across brain areas during development in mice journal December 2019
Translational outcomes in a full gene deletion of ubiquitin protein ligase E3A rat model of Angelman syndrome journal January 2020
Pathogenic POGZ mutation causes impaired cortical development and reversible autism-like phenotypes journal February 2020
A perturbed gene network containing PI3K–AKT, RAS–ERK and WNT–β-catenin pathways in leukocytes is linked to ASD genetics and symptom severity journal September 2019
The CHD Protein, Kismet, is Important for the Recycling of Synaptic Vesicles during Endocytosis journal December 2019
Epigenetic cues modulating the generation of cell‐type diversity in the cerebral cortex journal November 2018
Autism-associated CHD8 deficiency impairs axon development and migration of cortical neurons journal December 2018
Arid1b Haploinsufficiency Causes Abnormal Brain Gene Expression and Autism-Related Behaviors in Mice journal August 2017
Developmental social communication deficits in the Shank3 rat model of phelan-mcdermid syndrome and autism spectrum disorder: Social communication in the Shank3 rat journal January 2018
Dysfunction of the corticostriatal pathway in autism spectrum disorders journal November 2019
Molecular causes of sex‐specific deficits in rodent models of neurodevelopmental disorders journal December 2019
Neurodevelopmental phenotype associated with CHD8-SUPT16H duplication journal December 2019
The ASD Living Biology: from cell proliferation to clinical phenotype journal June 2018
Sexually dimorphic behavior, neuronal activity, and gene expression in Chd8-mutant mice journal August 2018
Sex bias in autism: new insights from Chd8 mutant mice? journal August 2018
Molecular dissection of CHARGE syndrome highlights the vulnerability of neural crest cells to problems with alternative splicing and other transcription-related processes journal September 2018
Altered Neocortical Gene Expression, Brain Overgrowth and Functional Over-Connectivity in Chd8 Haploinsufficient Mice journal April 2018
Neuronal overexpression of Ube3a isoform 2 causes behavioral impairments and neuroanatomical pathology relevant to 15q11.2-q13.3 duplication syndrome journal July 2017
The clinical presentation caused by truncating CHD8 variants journal April 2019
Observational fear behavior in rodents as a model for empathy journal October 2018
Genetic mutations in Ca 2+ signaling alter dendrite morphology and social approach in juvenile mice journal November 2018
Autism-linked CHD gene expression patterns during development predict multi-organ disease phenotypes journal October 2018
Volumes of brain structures in captive wild-type and laboratory rats: 7T magnetic resonance in vivo automatic atlas-based study journal April 2019

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