Genome Sequence of the Oleaginous Green Alga, Chlorella vulgaris UTEX 395

Guarnieri, Michael T.; Levering, Jennifer; Henard, Calvin A.; Boore, Jeffrey L.; Betenbaugh, Michael J.; Zengler, Karsten; Knoshaug, Eric P.

doi:10.3389/fbioe.2018.00037

Title: Genome Sequence of the Oleaginous Green Alga, Chlorella vulgaris UTEX 395

Journal Article · Thu Apr 05 00:00:00 EDT 2018 · Frontiers in Bioengineering and Biotechnology

DOI:https://doi.org/10.3389/fbioe.2018.00037· OSTI ID:1432068

Guarnieri, Michael T.; Levering, Jennifer; Henard, Calvin A.; Boore, Jeffrey L.; Betenbaugh, Michael J.; Zengler, Karsten; Knoshaug, Eric P.

Genome Sequence of the oleaginous green alga, Chlorella vulgaris UTEX 395

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Research Organization:: National Renewable Energy Laboratory (NREL), Golden, CO (United States); Johns Hopkins Univ., Baltimore, MD (United States)

Sponsoring Organization:: USDOE Office of Energy Efficiency and Renewable Energy (EERE)

Grant/Contract Number:: SC0012658; 22000; 06511103; 06511301; AC36-08GO28308

OSTI ID:: 1432068

Alternate ID(s):: OSTI ID: 1436056; OSTI ID: 1485585

Report Number(s):: NREL/JA-5100-71444; 37

Journal Information:: Frontiers in Bioengineering and Biotechnology, Journal Name: Frontiers in Bioengineering and Biotechnology Vol. 6; ISSN 2296-4185

Publisher:: Frontiers Research FoundationCopyright Statement

Country of Publication:: Switzerland

Language:: English

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Cited by: 15 works

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References (14)

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Techno-economic analysis of autotrophic microalgae for fuel production Davis, Ryan; Aden, Andy; Pienkos, Philip T. Applied Energy, Vol. 88, Issue 10 https://doi.org/10.1016/j.apenergy.2011.04.018	journal	October 2011
The effect of nitrogen limitation on lipid productivity and cell composition in Chlorella vulgaris Griffiths, Melinda J.; van Hille, Robert P.; Harrison, Susan T. L. Applied Microbiology and Biotechnology, Vol. 98, Issue 5 https://doi.org/10.1007/s00253-013-5442-4	journal	January 2014
The Chlorella vulgaris S-Nitrosoproteome under Nitrogen-Replete and -Deplete Conditions Henard, Calvin A.; Guarnieri, Michael T.; Knoshaug, Eric P. Frontiers in Bioengineering and Biotechnology, Vol. 4 https://doi.org/10.3389/fbioe.2016.00100	journal	January 2017
Enzymatic cell wall degradation of Chlorella vulgaris and other microalgae for biofuels production Gerken, Henri G.; Donohoe, Bryon; Knoshaug, Eric P. Planta, Vol. 237, Issue 1 https://doi.org/10.1007/s00425-012-1765-0	journal	September 2012
Genomic dna Isolation from Green and Brown Algae (Caulerpales and Fucales) for Microsatellite Library Construction1 Varela-Alvarez, Elena; Andreakis, Nikos; Lago-Leston, Asuncion Journal of Phycology, Vol. 42, Issue 3 https://doi.org/10.1111/j.1529-8817.2006.00218.x	journal	June 2006
A dynamic model for replication protein A (RPA) function in DNA processing pathways Fanning, E. Nucleic Acids Research, Vol. 34, Issue 15 https://doi.org/10.1093/nar/gkl550	journal	August 2006
Proteomic analysis of Chlorella vulgaris: Potential targets for enhanced lipid accumulation Guarnieri, Michael T.; Nag, Ambarish; Yang, Shihui Journal of Proteomics, Vol. 93 https://doi.org/10.1016/j.jprot.2013.05.025	journal	November 2013
Genome Annotation and Curation Using MAKER and MAKER‐P Campbell, Michael S.; Holt, Carson; Moore, Barry Current Protocols in Bioinformatics, Vol. 48, Issue 1 https://doi.org/10.1002/0471250953.bi0411s48	journal	December 2014
MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes Cantarel, B. L.; Korf, I.; Robb, S. M. C. Genome Research, Vol. 18, Issue 1 https://doi.org/10.1101/gr.6743907	journal	November 2007
An Outlook on Microalgal Biofuels Wijffels, R. H.; Barbosa, M. J. Science, Vol. 329, Issue 5993, p. 796-799 https://doi.org/10.1126/science.1189003	journal	August 2010
Genome-Scale Metabolic Model for the Green Alga Chlorella vulgaris UTEX 395 Accurately Predicts Phenotypes under Autotrophic, Heterotrophic, and Mixotrophic Growth Conditions Zuñiga, Cristal; Li, Chien-Ting; Huelsman, Tyler Plant Physiology, Vol. 172, Issue 1 https://doi.org/10.1104/pp.16.00593	journal	July 2016
Examination of Triacylglycerol Biosynthetic Pathways via De Novo Transcriptomic and Proteomic Analyses in an Unsequenced Microalga Guarnieri, Michael T.; Nag, Ambarish; Smolinski, Sharon L. PLoS ONE, Vol. 6, Issue 10 https://doi.org/10.1371/journal.pone.0025851	journal	October 2011

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Transcriptome analysis of gene expression in Chlorella vulgaris under salt stress Abdellaoui, Najib; Kim, Min Jeong; Choi, Tae Jin World Journal of Microbiology and Biotechnology, Vol. 35, Issue 9 https://doi.org/10.1007/s11274-019-2718-6	journal	August 2019
Overexpression of the DOF-Type Transcription Factor Enhances Lipid Synthesis in Chlorella vulgaris Tokunaga, Saki; Sanda, Shohei; Uraguchi, Yusuke Applied Biochemistry and Biotechnology, Vol. 189, Issue 1 https://doi.org/10.1007/s12010-019-02990-7	journal	March 2019
Chlorella vulgaris genome assembly and annotation reveals the molecular basis for metabolic acclimation to high light conditions Cecchin, Michela; Marcolungo, Luca; Rossato, Marzia The Plant Journal, Vol. 100, Issue 6 https://doi.org/10.1111/tpj.14508	journal	September 2019
Marine Natural Products from Microalgae: An -Omics Overview Lauritano, Chiara; Ferrante, Maria Immacolata; Rogato, Alessandra Marine Drugs, Vol. 17, Issue 5 https://doi.org/10.3390/md17050269	journal	May 2019

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Title: Genome Sequence of the Oleaginous Green Alga, Chlorella vulgaris UTEX 395

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