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Title: In vitro characterization of the antivirulence target of Gram-positive pathogens, peptidoglycan O-acetyltransferase A (OatA)

Journal Article · · PLoS Pathogens

The O-acetylation of the essential cell wall polymer peptidoglycan occurs in most Gram-positive bacterial pathogens, including species of Staphylococcus, Streptococcus and Enterococcus. This modification to peptidoglycan protects these pathogens from the lytic action of the lysozymes of innate immunity systems and, as such, is recognized as a virulence factor. The key enzyme involved, peptidoglycan O-acetyltransferase A (OatA) represents a particular challenge to biochemical study since it is a membrane associated protein whose substrate is the insoluble peptidoglycan cell wall polymer. OatA is predicted to be bimodular, being comprised of an N-terminal integral membrane domain linked to a C-terminal extracytoplasmic domain. We present herein the first biochemical and kinetic characterization of the C-terminal catalytic domain of OatA from two important human pathogens, Staphylococcus aureus and Streptococcus pneumoniae. Using both pseudosubstrates and novel biosynthetically-prepared peptidoglycan polymers, we characterized distinct substrate specificities for the two enzymes. In addition, the high resolution crystal structure of the C-terminal domain reveals an SGNH/GDSL-like hydrolase fold with a catalytic triad of amino acids but with a non-canonical oxyanion hole structure. Site-specific replacements confirmed the identity of the catalytic and oxyanion hole residues. A model is presented for the O-acetylation of peptidoglycan whereby the translocation of acetyl groups from a cytoplasmic source across the cytoplasmic membrane is catalyzed by the N-terminal domain of OatA for their transfer to peptidoglycan by its C-terminal domain. This study on the structure-function relationship of OatA provides a molecular and mechanistic understanding of this bacterial resistance mechanism opening the prospect for novel chemotherapeutic exploration to enhance innate immunity protection against Gram-positive pathogens.

Research Organization:
Brookhaven National Laboratory (BNL), Upton, NY (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
Grant/Contract Number:
SC0012704
OSTI ID:
1425067
Report Number(s):
BNL-203203-2018-JAAM
Journal Information:
PLoS Pathogens, Vol. 13, Issue 10; ISSN 1553-7374
Publisher:
Public Library of ScienceCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 26 works
Citation information provided by
Web of Science

References (72)

Impact of peptidoglycan O -acetylation on autolytic activities of the Enterococcus faecalis N -acetylglucosaminidase AtlA and N -acetylmuramidase AtlB journal August 2009
GDSL family of serine esterases/lipases journal November 2004
Novel eukaryotic enzymes modifying cell-surface biopolymers journal January 2010
PHENIX: a comprehensive Python-based system for macromolecular structure solution. text January 2010
Structural variation in the glycan strands of bacterial peptidoglycan journal March 2008
Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4 journal August 1970
In vitro Reconstitution of Peptidoglycan Assembly from the Gram-Positive Pathogen Streptococcus pneumoniae journal September 2013
Peptidoglycan: a critical activator of the mammalian immune system during infection and homeostasis: Peptidoglycan recognition in mammals journal August 2011
Mechanism of Action of Peptidoglycan O -Acetyltransferase B Involves a Ser-His-Asp Catalytic Triad journal September 2014
Different Active-Site Loop Orientation in Serine Hydrolases versus Acyltransferases journal February 2011
CpsY Influences Streptococcus iniae Cell Wall Adaptations Important for Neutrophil Intracellular Survival journal February 2012
Attenuation of penicillin resistance in a peptidoglycan O-acetyl transferase mutant of Streptococcus pneumoniae journal September 2006
The HMMTOP transmembrane topology prediction server journal September 2001
Dependence of lysozyme-catalysed solubilization of Proteus mirabilis peptidoglycan on the extent of O-acetylation journal February 1991
The Phyre2 web portal for protein modeling, prediction and analysis journal May 2015
TLSMD web server for the generation of multi-group TLS models journal January 2006
Analysis of Glycan Polymers Produced by Peptidoglycan Glycosyltransferases journal August 2007
Cross-linking and O-Acetylation of Newly Synthesized Peptidoglycan in Staphylococcus aureus H journal November 1989
Subtilisin. Stereochemical mechanism involving transition-state stabilization journal November 1972
Iterative model building, structure refinement and density modification with the PHENIX AutoBuild wizard. journalarticle January 2008
Isotope Effects on Enzyme-Catalyzed Acyl Transfer from p -Nitrophenyl Acetate:  Concerted Mechanisms and Increased Hyperconjugation in the Transition State journal April 1998
Lysozymes in the animal kingdom journal February 2010
Inhibition of Esterases by the Fluorides of Organic Acids journal January 1954
O-Acetyl Groups in the cell wall of Streptococcus Faecalis journal February 1958
Molecular Basis of Resistance to Muramidase and Cationic Antimicrobial Peptide Activity of Lysozyme in Staphylococci journal January 2007
O -Acetylation of Peptidoglycan in Gram-negative Bacteria : IDENTIFICATION AND CHARACTERIZATION OF PEPTIDOGLYCAN O-ACETYLTRANSFERASE IN NEISSERIA GONORRHOEAE journal February 2010
9-O-Acetylation of sialic acids is catalysed by CASD1 via a covalent acetyl-enzyme intermediate journal July 2015
OatA, a Peptidoglycan O-Acetyltransferase Involved in Listeria monocytogenes Immune Escape, Is Critical for Virulence journal September 2011
Visualization of a substrate-induced productive conformation of the catalytic triad of the Neisseria meningitidis peptidoglycan O -acetylesterase reveals mechanistic conservation in SGNH esterase family members journal September 2014
Assay for peptidoglycan O-acetyltransferase: A potential new antibacterial target journal August 2013
Transferase Versus Hydrolase: The Role of Conformational Flexibility in Reaction Specificity journal February 2017
Identification and Characterization of O -Acetylpeptidoglycan Esterase:  A Novel Enzyme Discovered in Neisseria gonorrhoeae journal January 2006
O-Acetylated peptidoglycan: Controlling the activity of bacterial autolysins and lytic enzymes of innate immune systems journal December 2011
The Extracytoplasmic Function Sigma Factor SigV Plays a Key Role in the Original Model of Lysozyme Resistance and Virulence of Enterococcus faecalis journal March 2010
Genome-Wide Identification of Genes Essential for the Survival of Streptococcus pneumoniae in Human Saliva journal February 2014
PHENIX: a comprehensive Python-based system for macromolecular structure solution journal January 2010
Peptidoglycan O Acetylation and Autolysin Profile of Enterococcus faecalis in the Viable but Nonculturable State journal January 2006
Chemical biology of peptidoglycan acetylation and deacetylation journal June 2014
Combining in situ proteolysis and mass spectrometry to crystallize Escherichia coli PgaB journal June 2012
The Role of the Plant-Specific ALTERED XYLOGLUCAN9 Protein in Arabidopsis Cell Wall Polysaccharide O- Acetylation journal February 2015
Enterococcus faecalis Constitutes an Unusual Bacterial Model in Lysozyme Resistance journal September 2007
Optimal description of a protein structure in terms of multiple groups undergoing TLS motion journal March 2006
De- O -acetylation of peptidoglycan regulates glycan chain extension and affects in vivo survival of Neisseria meningitidis : Role of ApeI in journal February 2013
Innate immune recognition of microbial cell wall components and microbial strategies to evade such recognitions journal August 2013
Monofunctional Transglycosylases Are Not Essential for Staphylococcus aureus Cell Wall Synthesis journal March 2011
Dual Role for the O-Acetyltransferase OatA in Peptidoglycan Modification and Control of Cell Septation in Lactobacillus plantarum journal October 2012
Understanding the Structure–Function Relationship of Lysozyme Resistance in Staphylococcus aureus by Peptidoglycan O-Acetylation Using Molecular Docking, Dynamics, and Lysis Assay journal March 2015
[20] Processing of X-ray diffraction data collected in oscillation mode book January 1997
HKL2MAP : a graphical user interface for macromolecular phasing with SHELX programs journal September 2004
Crystal Structure of Escherichia coli Thioesterase I/Protease I/Lysophospholipase L1: Consensus Sequence Blocks Constitute the Catalytic Center of SGNH-hydrolases through a Conserved Hydrogen Bond Network journal July 2003
Iterative model building, structure refinement and density modification with the PHENIX AutoBuild wizard journal December 2007
The Presence of Peptidoglycan O-Acetyltransferase in Various Staphylococcal Species Correlates with Lysozyme Resistance and Pathogenicity journal July 2006
Coot model-building tools for molecular graphics journal November 2004
Mutations of the Listeria monocytogenes Peptidoglycan N -Deacetylase and O -Acetylase Result in Enhanced Lysozyme Sensitivity, Bacteriolysis, and Hyperinduction of Innate Immune Pathways journal July 2011
Identification and Characterization of a Monofunctional Glycosyltransferase from Staphylococcus aureus journal August 2001
Bacterial cell wall biogenesis is mediated by SEDS and PBP polymerase families functioning semi-autonomously journal September 2016
O -Acetylated peptidoglycan: its occurrence, pathobiological significance, and biosynthesis journal February 1992
Helicobacter pylori Peptidoglycan Modifications Confer Lysozyme Resistance and Contribute to Survival in the Host journal December 2012
Peptidoglycan O-acetylation increases in response to vancomycin treatment in vancomycin-resistant Enterococcus faecalis journal April 2017
Rhamnogalacturonan acetylesterase elucidates the structure and function of a new family of hydrolases journal April 2000
Probing the substrate specificity of the intracellular brain platelet-activating factor acetylhydrolase journal August 1999
O-Acetylation of Plant Cell Wall Polysaccharides journal January 2012
Substrate Specificity and Kinetic Characterization of Peptidoglycan O -Acetyltransferase B from Neisseria gonorrhoeae journal May 2014
Lysozyme Resistance in Streptococcus suis Is Highly Variable and Multifactorial journal April 2012
The intrinsic cephalosporin resistome of Listeria monocytogenes in the context of stress response, gene regulation, pathogenesis and therapeutics journal December 2015
Cavin1 intrinsically disordered domains are essential for fuzzy electrostatic interactions and caveola formation journal February 2021
Listeria monocytogenes Is Resistant to Lysozyme through the Regulation, Not the Acquisition, of Cell Wall-Modifying Enzymes journal August 2014
Antibacterial drug discovery in the resistance era journal January 2016
Type I Signal Peptidase and Protein Secretion in Staphylococcus aureus journal March 2012
Why are pathogenic staphylococci so lysozyme resistant? The peptidoglycan O-acetyltransferase OatA is the major determinant for lysozyme resistance of Staphylococcus aureus: Lysozyme resistance of S. aureus journal December 2004
O -Acetylation of Peptidoglycan Is Required for Proper Cell Separation and S-layer Anchoring in Bacillus anthracis journal December 2010
Characterization of O -Acetylation of N -Acetylglucosamine : A NOVEL STRUCTURAL VARIATION OF BACTERIAL PEPTIDOGLYCAN journal May 2011

Cited By (9)

Structure of the essential peptidoglycan amidotransferase MurT/GatD complex from Streptococcus pneumoniae journal August 2018
Cytosolic Acetyl-CoA Generated by ATP-Citrate Lyase Is Essential for Acetylation of Cell Wall Polysaccharides journal September 2019
Environment Shapes the Accessible Daptomycin Resistance Mechanisms in Enterococcus faecium journal July 2019
Mechanistic Pathways for Peptidoglycan O-Acetylation and De-O-Acetylation journal October 2018
Genetic Determinants Enabling Medium-Dependent Adaptation to Nafcillin in Methicillin-Resistant Staphylococcus aureus journal April 2020
Development of a High Throughput Screen for the Identification of Inhibitors of Peptidoglycan O-Acetyltransferases, New Potential Antibacterial Targets journal May 2019
Peptidoglycan O-Acetylation as a Virulence Factor: Its Effect on Lysozyme in the Innate Immune System journal July 2019
Morphology of Helicobacter pylori as a result of peptidoglycan and cytoskeleton rearrangements journal January 2018
Xylan in the Middle: Understanding Xylan Biosynthesis and Its Metabolic Dependencies Toward Improving Wood Fiber for Industrial Processing journal February 2019

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