Metatranscriptomic Analysis of Arctic Peat Soil Microbiota
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journal
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July 2014 |
Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions
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March 2012 |
The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes
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July 2009 |
Tundra soil carbon is vulnerable to rapid microbial decomposition under climate warming
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February 2016 |
Microbial mediation of carbon-cycle feedbacks to climate warming
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December 2011 |
Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
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November 2011 |
ggplot2
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book
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January 2009 |
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
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May 2006 |
Isolation of a Substantial Proportion of Forest Soil Bacterial Communities Detected via Pyrotag Sequencing
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January 2013 |
Bacterial chitin degradation—mechanisms and ecophysiological strategies
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January 2013 |
Assessment of Bias Associated with Incomplete Extraction of Microbial DNA from Soil
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June 2009 |
Soil Microbial Community Responses to a Decade of Warming as Revealed by Comparative Metagenomics
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December 2013 |
Über die Dissociationswärme und den Einfluss der Temperatur auf den Dissociationsgrad der Elektrolyte
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January 1889 |
Isolation and characterization of novel bacterial strains exhibiting ligninolytic potential
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January 2011 |
Responses of soil bacterial and fungal communities to extreme desiccation and rewetting
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July 2013 |
Active and total microbial communities in forest soil are largely different and highly stratified during decomposition
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July 2011 |
Forest harvesting reduces the soil metagenomic potential for biomass decomposition
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April 2015 |
Metagenomics of Hydrocarbon Resource Environments Indicates Aerobic Taxa and Genes to be Unexpectedly Common
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September 2013 |
Isolation of actinomycetes from the root of the plant, Ophiopogon japonicus, and proposal of two new species, Actinoallomurus liliacearum sp. nov. and Actinoallomurus vinaceus sp. nov.
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April 2012 |
Systems biology and biotechnology of Streptomyces species for the production of secondary metabolites
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March 2014 |
Selective isolation of bioactive soil actinomycetes belonging to the Streptomyces violaceusniger phenotypic cluster
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May 2004 |
Feature Selection with the Boruta Package
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January 2010 |
Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
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October 2006 |
Long-term experimental manipulation of climate alters the ectomycorrhizal community of Betula nana in Arctic tundra: CLIMATE CHANGE ALTERS ECTOMYCORRHIZAL FUNGI
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October 2010 |
Methods for characterization of Streptomyces species
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July 1966 |
Synthesis analysis of the temperature sensitivity of soil respiration from laboratory studies in relation to incubation methods and soil conditions
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March 2013 |
Phylogenetic conservatism of functional traits in microorganisms
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December 2012 |
Long-term warming restructures Arctic tundra without changing net soil carbon storage
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May 2013 |
IMG: the integrated microbial genomes database and comparative analysis system
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December 2011 |
Improved Culturability of Soil Bacteria and Isolation in Pure Culture of Novel Members of the Divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia
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May 2002 |
Stronger warming effects on microbial abundances in colder regions
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December 2015 |
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
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January 2009 |
Modern Applied Statistics with S
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book
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August 2002 |
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
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journal
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August 2006 |
The Unsolved Challenge to Phylogenetic Correlation Tests for Categorical Characters
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September 2014 |
Extracellular DNA extraction is a fast, cheap and reliable alternative for multi-taxa surveys based on soil DNA
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May 2016 |
Search and clustering orders of magnitude faster than BLAST
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August 2010 |
Next Generation Sequence Assembly with AMOS
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March 2011 |
EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
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October 2007 |
Global soil carbon projections are improved by modelling microbial processes
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July 2013 |
Temperature sensitivity of soil carbon decomposition and feedbacks to climate change
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March 2006 |
The temperature response of soil microbial efficiency and its feedback to climate
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January 2013 |
Assessment of bacterial communities and characterization of lead-resistant bacteria in the rhizosphere soils of metal-tolerant Chenopodium ambrosioides grown on lead–zinc mine tailings
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June 2012 |
Changes in the seasonal snow cover of alpine regions and its effect on soil processes: A review
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March 2007 |
diArk – the database for eukaryotic genome and transcriptome assemblies in 2014
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journal
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November 2014 |
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
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November 2007 |
Influence of Plant Polymers on the Distribution and Cultivation of Bacteria in the Phylum Acidobacteria
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November 2010 |
A meta-analysis of responses of soil biota to global change
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journal
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January 2011 |
Enzymic analysis of microbial pattern and process
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January 1994 |
Functional Assays and Metagenomic Analyses Reveals Differences between the Microbial Communities Inhabiting the Soil Horizons of a Norway Spruce Plantation
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February 2013 |
The Michaelis-Menten kinetics of soil extracellular enzymes in response to temperature: a cross-latitudinal study
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January 2012 |
Predicting microbial traits with phylogenies
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September 2015 |
Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winter: Seasonal dynamics of a soil microbial community
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October 2015 |
Genomic Potential for Polysaccharide Deconstruction in Bacteria
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December 2014 |
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
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December 2012 |
Basic local alignment search tool
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October 1990 |
Long-term forest soil warming alters microbial communities in temperate forest soils
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journal
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February 2015 |
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
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December 2004 |
Soil Warming and Carbon-Cycle Feedbacks to the Climate System
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December 2002 |
Potential of Cometabolic Transformation of Polysaccharides and Lignin in Lignocellulose by Soil Actinobacteria
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February 2014 |
Selectivity in Mammalian Extinction Risk and Threat Types: a New Measure of Phylogenetic Signal Strength in Binary Traits: Selectivity in Extinction Risk
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February 2010 |
Two decades of warming increases diversity of a potentially lignolytic bacterial community
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May 2015 |
Evolution of High Cellulolytic Activity in Symbiotic Streptomyces through Selection of Expanded Gene Content and Coordinated Gene Expression
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June 2016 |
Soil warming and nitrogen deposition alter soil organic matter composition at the molecular-level
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February 2015 |
Metagenomic analysis of an anaerobic alkane-degrading microbial culture: potential hydrocarbon-activating pathways and inferred roles of community members
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October 2013 |
The Pfam protein families database
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November 2011 |
Phylogenetic Logistic Regression for Binary Dependent Variables
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November 2009 |
Soil warming, carbon-nitrogen interactions, and forest carbon budgets
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May 2011 |
Responses of Trace Gas Fluxes and N Availability to Experimentally Elevated Soil Temperatures
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August 1994 |
Thermal adaptation of soil microbial respiration to elevated temperature
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December 2008 |
Granulicella paludicola gen. nov., sp. nov., Granulicella pectinivorans sp. nov., Granulicella aggregans sp. nov. and Granulicella rosea sp. nov., acidophilic, polymer-degrading acidobacteria from Sphagnum peat bogs
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journal
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January 2010 |
Community composition and cellulase activity of cellulolytic bacteria from forest soils planted with broad-leaved deciduous and evergreen trees
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July 2013 |
Microbial biomass, functional capacity, and community structure after 12 years of soil warming
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November 2008 |
A Rapid and Easy Method for the Detection of Microbial Cellulases on Agar Plates Using Gram’s Iodine
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September 2008 |
Profile hidden Markov models
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October 1998 |
Assessing the hydrocarbon degrading potential of indigenous bacteria isolated from crude oil tank bottom sludge and hydrocarbon-contaminated soil of Azzawiya oil refinery, Libya
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June 2014 |
Seasonal dynamics of fungal communities in a temperate oak forest soil
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journal
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September 2013 |
Increased ectomycorrhizal fungal abundance after long-term fertilization and warming of two arctic tundra ecosystems
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July 2006 |
Responses of ecosystem carbon cycle to experimental warming: a meta-analysis
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March 2013 |
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
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December 2014 |
Cultivation of globally distributed soil bacteria from phylogenetic lineages previously only detected in cultivation-independent surveys: Cultivation of soil bacteria
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November 2002 |
Changes in rhizosphere bacterial gene expression following glyphosate treatment
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May 2016 |