Draft Genomes Shed Light on the Dual Bacterial Symbiosis that Dominates the Microbiome of the Coral Reef Sponge Amphimedon queenslandica
|
journal
|
October 2016 |
Microbial transformations of sulfur compounds in a stratified lake (Solar Lake, Sinai)1: Sulfur cycle in a stratified lake
|
journal
|
September 1979 |
Uncultivated microbes in need of their own taxonomy
|
journal
|
July 2017 |
Sponge-Associated Microorganisms: Evolution, Ecology, and Biotechnological Potential
|
journal
|
June 2007 |
Diversity of aerobic and anaerobic ammonia-oxidizing bacteria in marine sponges
|
journal
|
July 2009 |
Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms: Sponge-associated microorganisms
|
journal
|
December 2011 |
An environmental bacterial taxon with a large and distinct metabolic repertoire
|
journal
|
January 2014 |
The Sponge Hologenome
|
journal
|
April 2016 |
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
|
journal
|
April 2012 |
Habitat- and host-related variation in sponge bacterial symbiont communities in Indonesian waters
|
journal
|
May 2013 |
Sulfur-oxidizing bacteria in environmental technology
|
journal
|
November 2015 |
Complete genome sequence of Thioalkalivibrio “sulfidophilus” HL-EbGr7
|
journal
|
February 2011 |
Predicting the HMA-LMA Status in Marine Sponges by Machine Learning
|
journal
|
May 2017 |
Complete genome sequence of Thioalkalivibrio sp. K90mix
|
journal
|
December 2011 |
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
|
journal
|
March 2010 |
Chemosynthetic endosymbioses: adaptations to oxic–anoxic interfaces
|
journal
|
September 2005 |
Calyculin biogenesis from a pyrophosphate protoxin produced by a sponge symbiont
|
journal
|
June 2014 |
KAAS: an automatic genome annotation and pathway reconstruction server
|
journal
|
May 2007 |
Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability
|
journal
|
June 2012 |
In situ feeding and element removal in the symbiont-bearing sponge Theonella swinhoei : Bulk DOC is the major source for carbon
|
journal
|
January 2003 |
Increasing the Richness of Culturable Arsenic-Tolerant Bacteria from Theonella swinhoei by Addition of Sponge Skeleton to the Growth Medium
|
journal
|
January 2016 |
The deep-sea glass sponge L ophophysema eversa harbours potential symbionts responsible for the nutrient conversions of carbon, nitrogen and sulfur : Potential symbionts in a glass sponge
|
journal
|
January 2016 |
Endobionts of the Coral Reef Sponge Theonella swinhoei (Porifera, Demospongiae)
|
journal
|
July 1999 |
Lifestyle evolution in symbiotic bacteria: insights from genomics
|
journal
|
August 2000 |
KEGG: Kyoto Encyclopedia of Genes and Genomes
|
journal
|
January 2000 |
Oxygen dynamics and transport in the Mediterranean sponge Aplysina aerophoba
|
journal
|
January 2008 |
Genomic resolution of a cold subsurface aquifer community provides metabolic insights for novel microbes adapted to high CO 2 concentrations : Genomic resolution of a high-CO
|
journal
|
July 2016 |
Community-wide analysis of microbial genome sequence signatures
|
journal
|
January 2009 |
In situ fluxes of dissolved inorganic nitrogen from the sponge community on Conch Reef, Key Largo, Florida
|
journal
|
May 2008 |
Study of seawater alkalization as a promising RO pretreatment method
|
journal
|
February 2003 |
The “bacterial heterodisulfide” DsrC is a key protein in dissimilatory sulfur metabolism
|
journal
|
July 2014 |
Phylogenetic Diversity and Spatial Distribution of the Microbial Community Associated with the Caribbean Deep-water Sponge Polymastia cf. corticata by 16S rRNA, aprA, and amoA Gene Analysis
|
journal
|
January 2008 |
Phylogenetically Diverse ureC Genes and Their Expression Suggest the Urea Utilization by Bacterial Symbionts in Marine Sponge Xestospongia testudinaria
|
journal
|
May 2013 |
Proposal for a revised classification of the Demospongiae (Porifera)
|
journal
|
April 2015 |
Genome Reduction and Microbe-Host Interactions Drive Adaptation of a Sulfur-Oxidizing Bacterium Associated with a Cold Seep Sponge
|
journal
|
March 2017 |
Sponge-Specific Unknown Bacterial Groups Detected in Marine Sponges Collected from Korea Through Barcoded Pyrosequencing
|
journal
|
January 2015 |
Prodigal: prokaryotic gene recognition and translation initiation site identification
|
journal
|
March 2010 |
Do associated microbial abundances impact marine demosponge pumping rates and tissue densities?
|
journal
|
November 2007 |
Two classes of metabolites fromTheonella swinhoei are localized in distinct populations of bacterial symbionts
|
journal
|
July 1996 |
Diversity of Bacteria in the Marine Sponge Aplysina fulva in Brazilian Coastal Waters
|
journal
|
March 2009 |
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
|
journal
|
May 2015 |
Studies on the Metabolism of Autotrophic Bacteria: i. the Respiration of Thiobacillus Thiooxidans on Sulfur
|
journal
|
September 1942 |
The HMA-LMA Dichotomy Revisited: an Electron Microscopical Survey of 56 Sponge Species
|
journal
|
August 2014 |
Importance of the DsrMKJOP complex for sulfur oxidation in Allochromatium vinosum and phylogenetic analysis of related complexes in other prokaryotes
|
journal
|
August 2006 |
Search and clustering orders of magnitude faster than BLAST
|
journal
|
August 2010 |
Nagahamide A, an Antibacterial Depsipeptide from the Marine Sponge Theonella swinhoei 1
|
journal
|
September 2002 |
Metabolites from symbiotic bacteriaThis review is dedicated to Professor Axel Zeeck on the occasion of his 65th birthday.
|
journal
|
January 2004 |
In four shallow and mesophotic tropical reef sponges from Guam the microbial community largely depends on host identity
|
journal
|
January 2016 |
Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
|
journal
|
April 2016 |
Metabolites from symbiotic bacteria
|
journal
|
January 2009 |
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
|
journal
|
April 2012 |
Identification of the antifungal peptide-containing symbiont of the marine sponge Theonella swinhoei as a novel δ-proteobacterium, " Candidatus Entotheonella palauensis"
|
journal
|
July 2000 |
Complex nitrogen cycling in the sponge Geodia barretti
|
journal
|
September 2009 |
Oxygen dynamics in choanosomal sponge explants
|
journal
|
May 2005 |
Phylogenetically and Spatially Close Marine Sponges Harbour Divergent Bacterial Communities
|
journal
|
December 2012 |
Sponge-associated bacteria mineralize arsenic and barium on intracellular vesicles
|
journal
|
February 2017 |
‘Sponge-specific’ bacteria are widespread (but rare) in diverse marine environments
|
journal
|
October 2012 |
Unusual biology across a group comprising more than 15% of domain Bacteria
|
journal
|
June 2015 |
Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges
|
journal
|
October 2011 |
Marine sponges as habitats of anaerobic phototrophic bacteria
|
journal
|
March 1976 |
Biochemistry and molecular biology of lithotrophic sulfur oxidation by taxonomically and ecologically diverse bacteria and archaea
|
journal
|
November 2009 |
Identical bacterial populations colonize premature infant gut, skin, and oral microbiomes and exhibit different in situ growth rates
|
journal
|
January 2017 |
Fast gapped-read alignment with Bowtie 2
|
journal
|
March 2012 |
Lucinidae (Bivalvia)–the most diverse group of chemosymbiotic molluscs
|
journal
|
November 2006 |
Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling
|
journal
|
January 2013 |
Implementing sponge physiological and genomic information to enhance the diversity of its culturable associated bacteria
|
journal
|
December 2013 |
Evidence of a Putative Deep Sea Specific Microbiome in Marine Sponges
|
journal
|
March 2014 |
Heterogeneous oxygenation resulting from active and passive flow in two Mediterranean sponges, Dysida avara and Chondrosia reniformis
|
journal
|
April 2010 |
Intermittent Hypoxia and Prolonged Suboxia Measured In situ in a Marine Sponge
|
journal
|
December 2016 |
Do the organic sulfur compounds DMSP and DMS drive coral microbial associations?
|
journal
|
March 2010 |
Taxonomy, reproduction and ecology of new and known Red Sea sponges
|
journal
|
December 2004 |
HMMER web server: 2015 update
|
journal
|
May 2015 |
Diversity, structure and convergent evolution of the global sponge microbiome
|
journal
|
June 2016 |
Oxidation of Reduced Inorganic Sulfur Compounds by Bacteria: Emergence of a Common Mechanism?
|
journal
|
July 2001 |
MUSCLE: multiple sequence alignment with high accuracy and high throughput
|
journal
|
March 2004 |
Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont
|
journal
|
August 2013 |
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
|
journal
|
May 2015 |
Environmental Assessment of the Gulf of Aqaba Coastal Surface Waters, Saudi Arabia
|
journal
|
March 2014 |
Culturable associated-bacteria of the sponge Theonella swinhoei show tolerance to high arsenic concentrations
|
journal
|
February 2015 |
IMG/M: integrated genome and metagenome comparative data analysis system
|
journal
|
October 2016 |
Phylogenetic and environmental diversity of DsrAB-type dissimilatory (bi)sulfite reductases
|
journal
|
October 2014 |
Profile hidden Markov models
|
journal
|
October 1998 |
Ecophysiology of Thioploca ingrica as revealed by the complete genome sequence supplemented with proteomic evidence
|
journal
|
October 2014 |
Genomic analysis reveals versatile heterotrophic capacity of a potentially symbiotic sulfur-oxidizing bacterium in sponge: A versatile SOB as a potential sponge symbiont
|
journal
|
August 2014 |
DNA–DNA hybridization values and their relationship to whole-genome sequence similarities
|
journal
|
January 2007 |
A case study on chemical defense based on quorum sensing: antibacterial activity of sponge-associated bacterium Pseudoalteromonas sp. NJ6-3-1 induced by quorum sensing mechanisms
|
journal
|
September 2010 |
Integrated metabolism in sponge–microbe symbiosis revealed by genome-centered metatranscriptomics
|
journal
|
March 2017 |
Comparison of prokaryotic diversity at offshore oceanic locations reveals a different microbiota in the Mediterranean Sea: Offshore prokaryotic diversity
|
journal
|
June 2006 |