The tracrRNA and Cas9 families of type II CRISPR-Cas immunity systems
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journal
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February 2013 |
Benefits and Challenges with Applying Unique Molecular Identifiers in Next Generation Sequencing to Detect Low Frequency Mutations
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January 2016 |
Single-Stranded DNA Cleavage by Divergent CRISPR-Cas9 Enzymes
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November 2015 |
Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression
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February 2013 |
Programmable RNA recognition and cleavage by CRISPR/Cas9
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September 2014 |
Cutadapt removes adapter sequences from high-throughput sequencing reads
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May 2011 |
Sushi.R: flexible, quantitative and integrative genomic visualizations for publication-quality multi-panel figures
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June 2014 |
Hairpins under tension: RNA versus DNA
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August 2015 |
Biology and Applications of CRISPR Systems: Harnessing Nature’s Toolbox for Genome Engineering
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January 2016 |
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
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March 2010 |
DNase H Activity of Neisseria meningitidis Cas9
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October 2015 |
Crystal Structure of Staphylococcus aureus Cas9
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August 2015 |
DNA interrogation by the CRISPR RNA-guided endonuclease Cas9
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January 2014 |
Elimination of Toxic Microsatellite Repeat Expansion RNA by RNA-Targeting Cas9
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August 2017 |
Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition
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November 2015 |
Profiling of engineering hotspots identifies an allosteric CRISPR-Cas9 switch
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May 2016 |
PANDAseq: paired-end assembler for illumina sequences
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January 2012 |
Direct Cytosolic Delivery of CRISPR/Cas9-Ribonucleoprotein for Efficient Gene Editing
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January 2017 |
Mfold web server for nucleic acid folding and hybridization prediction
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July 2003 |
RNA-based recognition and targeting: sowing the seeds of specificity
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February 2017 |
Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation
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October 2014 |
Classification and evolution of type II CRISPR-Cas systems
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April 2014 |
Structure and Engineering of Francisella novicida Cas9
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February 2016 |
Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease
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July 2014 |
UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy
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January 2017 |
A CRISPR/Cas system mediates bacterial innate immune evasion and virulence
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journal
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April 2013 |
C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector
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June 2016 |
Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems
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November 2015 |
In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus
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December 2016 |
Characterization of Staphylococcus aureus Cas9: a smaller Cas9 for all-in-one adeno-associated virus delivery and paired nickase applications
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November 2015 |
Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systems
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August 2016 |
DNA targeting specificity of RNA-guided Cas9 nucleases
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July 2013 |
WebLogo: A Sequence Logo Generator
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May 2004 |
Improving CRISPR-Cas nuclease specificity using truncated guide RNAs
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journal
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January 2014 |
The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA
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journal
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November 2010 |
Applications of Cas9 as an RNA-programmed RNA-binding protein
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journal
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April 2015 |
Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria
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journal
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September 2012 |
Crystal Structure of Cas9 in Complex with Guide RNA and Target DNA
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journal
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February 2014 |
Phage Response to CRISPR-Encoded Resistance in Streptococcus thermophilus
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December 2007 |
A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity
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June 2012 |
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
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journal
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November 2009 |
HTSeq--a Python framework to work with high-throughput sequencing data
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journal
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September 2014 |
Distinct patterns of Cas9 mismatch tolerance in vitro and in vivo
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journal
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May 2016 |
Two distinct RNase activities of CRISPR-C2c2 enable guide-RNA processing and RNA detection
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journal
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September 2016 |
Programmable RNA Tracking in Live Cells with CRISPR/Cas9
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April 2016 |
Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation
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January 2012 |
PROMALS3D: a tool for multiple protein sequence and structure alignments
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journal
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February 2008 |
Fast gapped-read alignment with Bowtie 2
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journal
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March 2012 |
Direct observation of R-loop formation by single RNA-guided Cas9 and Cascade effector complexes
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May 2014 |
Cas13b Is a Type VI-B CRISPR-Associated RNA-Guided RNase Differentially Regulated by Accessory Proteins Csx27 and Csx28
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February 2017 |
Mechanism of substrate selection by a highly specific CRISPR endoribonuclease
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February 2012 |
Forna (force-directed RNA): Simple and effective online RNA secondary structure diagrams
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June 2015 |
Cationic lipid-mediated delivery of proteins enables efficient protein-based genome editing in vitro and in vivo
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October 2014 |
Fast and effective prediction of microRNA/target duplexes
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October 2004 |
A Cas9-guide RNA complex preorganized for target DNA recognition
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June 2015 |
Multiplex Genome Engineering Using CRISPR/Cas Systems
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January 2013 |
Molecular structure of r(GCG)d(TATACGC): a DNA–RNA hybrid helix joined to double helical DNA
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journal
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October 1982 |
Crystal Structure of the Minimal Cas9 from Campylobacter jejuni Reveals the Molecular Diversity in the CRISPR-Cas9 Systems
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March 2017 |
Lessons from Enzyme Kinetics Reveal Specificity Principles for RNA-Guided Nucleases in RNA Interference and CRISPR-Based Genome Editing
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journal
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January 2017 |
In vivo genome editing using Staphylococcus aureus Cas9
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journal
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April 2015 |
In vivo genome editing with a small Cas9 orthologue derived from Campylobacter jejuni
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February 2017 |
RNA-guided editing of bacterial genomes using CRISPR-Cas systems
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journal
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January 2013 |
SHAPE-Seq 2.0: systematic optimization and extension of high-throughput chemical probing of RNA secondary structure with next generation sequencing
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October 2014 |
Filter-Binding Assay for Analysis of RNA-Protein Interactions
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October 2012 |
Targeting cellular mRNAs translation by CRISPR-Cas9
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July 2016 |