Iterative energy minimization with the aim of achieving self-consistency is a common feature of Born-Oppenheimer molecular dynamics (BOMD) and classical molecular dynamics with polarizable force fields. In the former, the electronic degrees of freedom are optimized, while the latter often involves an iterative determination of induced point dipoles. The computational effort of the self-consistency procedure can be reduced by re-using converged solutions from previous time steps. However, this must be done carefully, as not to break time-reversal symmetry, which negatively impacts energy conservation. Self-consistent schemes based on the extended Lagrangian formalism, where the initial guesses for the optimized quantities are treated as auxiliary degrees of freedom, constitute one elegant solution. We report on the performance of two integration schemes with the same underlying extended Lagrangian structure, which we both employ in two radically distinct regimes—in classical molecular dynamics simulations with the AMOEBA polarizable force field and in BOMD simulations with the Onetep linear-scaling density functional theory (LS-DFT) approach. Furthermore, both integration schemes are found to offer significant improvements over the standard (unpropagated) molecular dynamics formulation in both the classical and LS-DFT regimes.
Vitale, Valerio, et al. "Performance of extended Lagrangian schemes for molecular dynamics simulations with classical polarizable force fields and density functional theory." Journal of Chemical Physics, vol. 146, no. 12, Mar. 2017. https://doi.org/10.1063/1.4978684
Vitale, Valerio, Dziedzic, Jacek, Albaugh, Alex, Niklasson, Anders M. N., Head-Gordon, Teresa, & Skylaris, Chris -Kriton (2017). Performance of extended Lagrangian schemes for molecular dynamics simulations with classical polarizable force fields and density functional theory. Journal of Chemical Physics, 146(12). https://doi.org/10.1063/1.4978684
Vitale, Valerio, Dziedzic, Jacek, Albaugh, Alex, et al., "Performance of extended Lagrangian schemes for molecular dynamics simulations with classical polarizable force fields and density functional theory," Journal of Chemical Physics 146, no. 12 (2017), https://doi.org/10.1063/1.4978684
@article{osti_1414137,
author = {Vitale, Valerio and Dziedzic, Jacek and Albaugh, Alex and Niklasson, Anders M. N. and Head-Gordon, Teresa and Skylaris, Chris -Kriton},
title = {Performance of extended Lagrangian schemes for molecular dynamics simulations with classical polarizable force fields and density functional theory},
annote = {Iterative energy minimization with the aim of achieving self-consistency is a common feature of Born-Oppenheimer molecular dynamics (BOMD) and classical molecular dynamics with polarizable force fields. In the former, the electronic degrees of freedom are optimized, while the latter often involves an iterative determination of induced point dipoles. The computational effort of the self-consistency procedure can be reduced by re-using converged solutions from previous time steps. However, this must be done carefully, as not to break time-reversal symmetry, which negatively impacts energy conservation. Self-consistent schemes based on the extended Lagrangian formalism, where the initial guesses for the optimized quantities are treated as auxiliary degrees of freedom, constitute one elegant solution. We report on the performance of two integration schemes with the same underlying extended Lagrangian structure, which we both employ in two radically distinct regimes—in classical molecular dynamics simulations with the AMOEBA polarizable force field and in BOMD simulations with the Onetep linear-scaling density functional theory (LS-DFT) approach. Furthermore, both integration schemes are found to offer significant improvements over the standard (unpropagated) molecular dynamics formulation in both the classical and LS-DFT regimes.},
doi = {10.1063/1.4978684},
url = {https://www.osti.gov/biblio/1414137},
journal = {Journal of Chemical Physics},
issn = {ISSN 0021-9606},
number = {12},
volume = {146},
place = {United States},
publisher = {American Institute of Physics (AIP)},
year = {2017},
month = {03}}
Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 372, Issue 2011https://doi.org/10.1098/rsta.2012.0483