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Title: Managed Metapopulations: Do Salmon Hatchery ‘Sources’ Lead to In-River ‘Sinks’ in Conservation?

Journal Article · · PLoS ONE
 [1];  [2];  [3];  [4];  [5];  [6];  [6]
  1. Univ. of California, Santa Cruz, CA (United States). Inst. of Marine Sciences
  2. Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States). Chemical Sciences Division
  3. US Fish and Wildlife Service, Stockton, CA (United States). Anadromous Fish Restoration Program
  4. East Bay Municipal Utility District, Lodi, CA (United States)
  5. National Marine Fisheries Service, Santa Cruz, CA (United States). Southwest Fisheries Science Center
  6. Univ. of California, Los Angeles, CA (United States). Dept. of Earth and Space Sciences

Maintaining viable populations of salmon in the wild is a primary goal for many conservation and recovery programs. The frequency and extent of connectivity among natal sources defines the demographic and genetic boundaries of a population. Yet, the role that immigration of hatchery-produced adults may play in altering population dynamics and fitness of natural populations remains largely unquantified. Quantifying, whether natural populations are self-sustaining, functions as sources (population growth rate in the absence of dispersal, λ>1), or as sinks (λ<1) can be obscured by an inability to identify immigrants. In this study we use a new isotopic approach to demonstrate that a natural spawning population of Chinook salmon, (Oncorhynchus tshawytscha) considered relatively healthy, represents a sink population when the contribution of hatchery immigrants is taken into consideration. We retrieved sulfur isotopes (34S/32S, referred to as δ34S) in adult Chinook salmon otoliths (ear bones) that were deposited during their early life history as juveniles to determine whether individuals were produced in hatcheries or naturally in rivers. Our results show that only 10.3% (CI=5.5 to 18.1%) of adults spawning in the river had otolith δ34S values less than 8.5‰, which is characteristic of naturally produced salmon. When considering the total return to the watershed (total fish in river and hatchery), we estimate that 90.7 to 99.3% (CI) of returning adults were produced in a hatchery (best estimate=95.9%). When population growth rate of the natural population was modeled to account for the contribution of previously unidentified hatchery immigrants, we found that hatchery-produced fish caused the false appearance of positive population growth. In conclusion, these findings highlight the potential dangers in ignoring source-sink dynamics in recovering natural populations, and question the extent to which declines in natural salmon populations are undetected by monitoring programs.

Research Organization:
Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States)
Sponsoring Organization:
USDOE; National Science Foundation (NSF); US Fish and Wildlife Service (USFWS)
Grant/Contract Number:
AC52-07NA27344
OSTI ID:
1396206
Report Number(s):
LLNL-JRNL-426609
Journal Information:
PLoS ONE, Vol. 7, Issue 2; ISSN 1932-6203
Publisher:
Public Library of ScienceCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 23 works
Citation information provided by
Web of Science

References (46)

Interactions between hatchery and wild salmonids in streams: differences in biology and evidence for competition journal August 2003
Pacific Salmon at the Crossroads: Stocks at Risk from California, Oregon, Idaho, and Washington journal March 1991
Sulfur stable isotope indicators of residency in estuarine fish journal July 2011
Past and Present Status of Central Valley Chinook Salmon journal September 1994
Otolith sulfur isotope method to reconstruct salmon ( Oncorhynchus tshawytscha ) life history
  • Weber, Peter K.; Hutcheon, Ian D.; McKeegan, Kevin D.
  • Canadian Journal of Fisheries and Aquatic Sciences, Vol. 59, Issue 4 https://doi.org/10.1139/f02-038
journal April 2002
Framework for Assessing Viability of Threatened and Endangered Chinook Salmon and Steelhead in the Sacramento-San Joaquin Basin journal February 2007
Central Valley Salmon: A Perspective on Chinook and Steelhead in the Central Valley of California [Central Valley Salmon: A Perspective on Chinook and Steelhead in the Central Valley of California] journal September 2006
Reproductive Success of Captive-Bred Steelhead Trout in the Wild: Evaluation of Three Hatchery Programs in the Hood River journal February 2007
Replacement of Sulfur, Carbon, and Nitrogen in Tissue of Growing Broad Whitefish ( Coregonus nasus ) in Response to a Change in Diet Traced by δ 34 S, δ 13 C, and δ 15 N journal October 1993
Tracking natal origins of salmon using isotopes, otoliths, and landscape geology journal July 2008
Identifying the contribution of wild and hatchery Chinook salmon ( Oncorhynchus tshawytscha ) to the ocean fishery using otolith microstructure as natural tags
  • Barnett-Johnson, Rachel; Grimes, Churchill B.; Royer, Chantell F.
  • Canadian Journal of Fisheries and Aquatic Sciences, Vol. 64, Issue 12 https://doi.org/10.1139/f07-129
journal December 2007
Selection in Captivity during Supportive Breeding May Reduce Fitness in the Wild journal June 2002
Sources, Sinks, and Population Regulation journal November 1988
The Effects of Small Dispersal Rates on Extinction Times in Structured Metapopulation Models journal September 2002
Metapopulation Structure of bull Trout: Influences of Physical, Biotic, and Geometrical Landscape Characteristics journal May 1999
Some Demographic and Genetic Consequences of Environmental Heterogeneity for Biological Control journal September 1969
Sulfur isotopes in otoliths allow discrimination of anadromous and non-anadromous ecotypes of sockeye salmon (Oncorhynchus nerka) journal July 2010
Chemistry and composition of fish otoliths:pathways, mechanisms and applications journal January 1999
Differences in juvenile phenotypes and survival between hatchery stocks and a natural population provide evidence for modified selection due to captive breeding journal April 2004
Reduced recruitment performance in natural populations of anadromous salmonids associated with hatchery-reared fish journal March 2011
Comparative Performance of Genetically Similar Hatchery and Naturally Reared Juvenile Coho Salmon in Streams journal August 1999
Long-Term Demographic Responses of Trout Populations to Habitat Manipulation in Six Colorado Streams journal August 1996
The road to extinction is paved with good intentions: negative association of fish hatcheries with threatened salmon
  • Levin, Phillip S.; Zabel, Richard W.; Williams, John G.
  • Proceedings of the Royal Society of London. Series B: Biological Sciences, Vol. 268, Issue 1472 https://doi.org/10.1098/rspb.2001.1634
journal June 2001
Water, not food, contributes the majority of strontium and barium deposited in the otoliths of a marine fish journal April 2006
Rapid Evolution of Reproductive Isolation in the Wild: Evidence from Introduced Salmon journal October 2000
Genetic Effects of Captive Breeding Cause a Rapid, Cumulative Fitness Decline in the Wild journal October 2007
Natural isotope markers in salmon journal June 1997
The Decline of Anadromous Fishes in California journal September 1994
A review of local adaptation in Salmonidac, with particular reference to Pacific and Atlantic salmon journal October 1991
SYNTHESIS: A review of quantitative genetic components of fitness in salmonids: implications for adaptation to future change: Quantitative genetics of charr, salmon, and trout journal April 2008
Density as a Misleading Indicator of Habitat Quality journal October 1983
Limitations of Captive Breeding in Endangered Species Recovery journal April 1996
A Large-Scale, Multispecies Status Assessment: Anadromous Salmonids in the Columbia River Basin journal August 2003
Salmon origin in California's Sacramento–San Joaquin river system as determined by otolith strontium isotopic composition journal January 1999
An integrated comparison of captive-bred and wild Atlantic salmon (Salmo salar): Implications for supportive breeding programs journal August 2008
A metapopulation perspective for salmon and other anadromous fish journal December 2007
Fitness reduction and potential extinction of wild populations of Atlantic salmon, Salmo salar , as a result of interactions with escaped farm salmon journal December 2003
Otoliths, increments, and elements: keys to a comprehensive understanding of fish populations? journal January 2001
Source-Sink Population Dynamics may Complicate the Interpretation of Long- Term Census Data journal January 1996
Validation of Sr isotopes in otoliths by laser ablation multicollector inductively coupled plasma mass spectrometry (LA-MC-ICPMS): opening avenues in fisheries science applications
  • Barnett-Johnson, Rachel; Ramos, Frank C.; Grimes, Churchill B.
  • Canadian Journal of Fisheries and Aquatic Sciences, Vol. 62, Issue 11 https://doi.org/10.1139/f05-194
journal November 2005
Calibrated sulfur isotope abundance ratios of three IAEA sulfur isotope reference materials and V-CDT with a reassessment of the atomic weight of sulfur journal August 2001
Examining Evidence of Reproductive Isolation in Sockeye Salmon journal March 2001
Erratum: Otolith sulfur isotope method to reconstruct salmon (Oncorhynchus tshawytscha) life history
  • Weber, Peter K.; Hutcheon, Ian D.; McKeegan, Kevin D.
  • Canadian Journal of Fisheries and Aquatic Sciences, Vol. 59, Issue 5 https://doi.org/10.1139/f02-901
journal May 2002
Foraging Behavior of Free-Ranging Wild and Hatchery Brown Trout in a Stream journal January 1984
Evaluation of a Spawning Habitat Enhancement Site for Chinook Salmon in a Regulated California River journal May 2004
Salmon, Wildlife, And Wine: Marine-Derived Nutrients In Human-Dominated Ecosystems Of Central California journal June 2006

Cited By (9)

Eight Decades of Hatchery Salmon Releases in the California Central Valley: Factors Influencing Straying and Resilience journal June 2019
Survival of Juvenile Fall-Run Chinook Salmon through the San Joaquin River Delta, California, 2010-2015 journal May 2018
Eco-evolutionary dynamics, density-dependent dispersal and collective behaviour: implications for salmon metapopulation robustness journal March 2018
Supportive breeders of Atlantic salmon Salmo salar have reduced fitness in nature journal June 2019
The use of otolith chemistry to characterize diadromous migrations journal July 2012
Weakening portfolio effect strength in a hatchery-supplemented Chinook salmon population complex journal December 2015
Fishery collapse, recovery, and the cryptic decline of wild salmon on a major California river journal November 2018
Reconstructing the Migratory Behavior and Long-Term Survivorship of Juvenile Chinook Salmon under Contrasting Hydrologic Regimes journal May 2015
Potential Factors Affecting Survival Differ by Run-Timing and Location: Linear Mixed-Effects Models of Pacific Salmonids (Oncorhynchus spp.) in the Klamath River, California journal May 2014