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Solution structure of the core SMN–Gemin2 complex

Journal Article · · Biochemical Journal
DOI:https://doi.org/10.1042/BJ20120241· OSTI ID:1395370

In humans, assembly of spliceosomal snRNPs (small nuclear ribonucleoproteins) begins in the cytoplasm where the multi-protein SMN (survival of motor neuron) complex mediates the formation of a seven-membered ring of Sm proteins on to a conserved site of the snRNA (small nuclear RNA). The SMN complex contains the SMN protein Gemin2 and several additional Gemins that participate in snRNP biosynthesis. SMN was first identified as the product of a gene found to be deleted or mutated in patients with the neurodegenerative disease SMA (spinal muscular atrophy), the leading genetic cause of infant mortality. In the present study, we report the solution structure of Gemin2 bound to the Gemin2-binding domain of SMN determined by NMR spectroscopy. This complex reveals the structure of Gemin2, how Gemin2 binds to SMN and the roles of conserved SMN residues near the binding interface. Surprisingly, several conserved SMN residues, including the sites of two SMA patient mutations, are not required for binding to Gemin2. Instead, they form a conserved SMN/Gemin2 surface that may be functionally important for snRNP assembly. The SMN–Gemin2 structure explains how Gemin2 is stabilized by SMN and establishes a framework for structure–function studies to investigate snRNP biogenesis as well as biological processes involving Gemin2 that do not involve snRNP assembly.

Research Organization:
Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Organization:
NSF; NIH
OSTI ID:
1395370
Journal Information:
Biochemical Journal, Journal Name: Biochemical Journal Journal Issue: 3 Vol. 445; ISSN 0264-6021
Publisher:
Biochemical Society
Country of Publication:
United States
Language:
ENGLISH

References (22)

The Spinal Muscular Atrophy Disease Gene Product, SMN, and Its Associated Protein SIP1 Are in a Complex with Spliceosomal snRNP Proteins journal September 1997
Gemin proteins are required for efficient assembly of Sm-class ribonucleoproteins journal November 2005
Smn, the spinal muscular atrophy–determining gene product, modulates axon growth and localization of β-actin mRNA in growth cones of motoneurons journal November 2003
The Xplor-NIH NMR molecular structure determination package journal January 2003
Stereospecific nuclear magnetic resonance assignments of the methyl groups of valine and leucine in the DNA-binding domain of the 434 repressor by biosynthetically directed fractional carbon-13 labeling journal September 1989
High-resolution X-ray and NMR Structures of the SMN Tudor Domain: Conformational Variation in the Binding Site for Symmetrically Dimethylated Arginine Residues journal March 2003
A multiprotein complex mediates the ATP-dependent assembly of spliceosomal U snRNPs journal September 2001
Measurement ofJand Dipolar Couplings from Simplified Two-Dimensional NMR Spectra journal April 1998
A new LexA-based genetic system for monitoring and analyzing protein heterodimerization in Escherichia coli journal January 1998
Model-free approach to the interpretation of nuclear magnetic resonance relaxation in macromolecules. 1. Theory and range of validity journal August 1982
Identification and characterization of a spinal muscular atrophy-determining gene journal January 1995
Augmentation of Reverse Transcription by Integrase through an Interaction with Host Factor, SIP1/Gemin2 Is Critical for HIV-1 Infection journal November 2009
A single nucleotide in the SMN gene regulates splicing and is responsible for spinal muscular atrophy journal May 1999
Heteronuclear multidimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients journal March 1999
Essential Role for the SMN Complex in the Specificity of snRNP Assembly journal November 2002
GNOM – a program package for small-angle scattering data processing journal October 1991
SMN complex localizes to the sarcomeric Z-disc and is a proteolytic target of calpain journal August 2008
Evolution of an RNP assembly system: A minimal SMN complex facilitates formation of UsnRNPs in Drosophila melanogaster journal July 2008
TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts journal June 2009
Spliceosomal UsnRNP biogenesis, structure and function journal June 2001
Dali: a network tool for protein structure comparison journal November 1995
SMN Deficiency Causes Tissue-Specific Perturbations in the Repertoire of snRNAs and Widespread Defects in Splicing journal May 2008

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