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Metabolic costs of amino acid and protein production in Escherichia coli
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Proteomic profiling of oil bodies isolated from the unicellular green microalga Chlamydomonas reinhardtii: With focus on proteins involved in lipid metabolism
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Methods to Reconstruct and Compare Transcriptional Regulatory Networks
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Using Flux Balance Analysis to Guide Microbial Metabolic Engineering
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De Novo Sequencing and Global Transcriptome Analysis of Nannochloropsis sp. (Eustigmatophyceae) Following Nitrogen Starvation
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Structure and biosynthesis of apolipoprotein B
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The Immunological Functions of Saposins
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Advances in microalgae engineering and synthetic biology applications for biofuel production
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A Predictive Model for Transcriptional Control of Physiology in a Free Living Cell
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Mapping and Dynamics of Regulatory DNA and Transcription Factor Networks in A. thaliana
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Correlation of mRNA and protein in complex biological samples
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Metabolic and gene expression changes triggered by nitrogen deprivation in the photoautotrophically grown microalgae Chlamydomonas reinhardtii and Coccomyxa sp. C-169
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Genomics and gene transcription kinetics in yeast
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May 2007 |
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Transcriptome analysis of Chlamydomonas reinhardtii during the process of lipid accumulation
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HILIC- and SCX-Based Quantitative Proteomics of Chlamydomonas reinhardtii during Nitrogen Starvation Induced Lipid and Carbohydrate Accumulation
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October 2012 |
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Integrated Quantitative Analysis of Nitrogen Stress Response in Chlamydomonas reinhardtii Using Metabolite and Protein Profiling
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February 2014 |
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Omic data from evolved E. coli are consistent with computed optimal growth from genome‐scale models
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January 2010 |
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Metabolic network reconstruction of Chlamydomonas offers insight into light‐driven algal metabolism
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January 2011 |
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miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
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May 2007 |
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March 2010 |
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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
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May 2010 |
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Dynamics of single mRNP nucleocytoplasmic transport and export through the nuclear pore in living cells
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May 2010 |
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Experimental evolution of an alternating uni- and multicellular life cycle in Chlamydomonas reinhardtii
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Wisdom of crowds for robust gene network inference
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Advantages and limitations of current network inference methods
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August 2010 |
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Mechanosensitive physiology of chlamydomonas reinhardtii under direct membrane distortion
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April 2014 |
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Genome-wide identification of transcription factors and transcription-factor binding sites in oleaginous microalgae Nannochloropsis
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June 2014 |
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Phosphorylation of Arabidopsis transketolase at Ser428 provides a potential paradigm for the metabolic control of chloroplast carbon metabolism
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February 2014 |
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ACCUMULATION OF OLEIC ACID IN HAEMATOCOCCUS PLUVIALIS (CHLOROPHYCEAE) UNDER NITROGEN STARVATION OR HIGH LIGHT IS CORRELATED WITH THAT OF ASTAXANTHIN ESTERS 1
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April 2002 |
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Knockdown of limiting-CO2-induced gene HLA3 decreases HCOFormula transport and photosynthetic Ci affinity in Chlamydomonas reinhardtii
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Probabilistic integrative modeling of genome-scale metabolic and regulatory networks in Escherichia coli and Mycobacterium tuberculosis
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September 2010 |
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Comparative transcriptome and metabolite analysis of oil palm and date palm mesocarp that differ dramatically in carbon partitioning
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June 2011 |
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Metabolic engineering of lipid catabolism increases microalgal lipid accumulation without compromising growth
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Psr1, a nuclear localized protein that regulates phosphorus metabolism in Chlamydomonas
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The Metabolome of Chlamydomonas reinhardtii following Induction of Anaerobic H 2 Production by Sulfur Depletion
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Three Acyltransferases and Nitrogen-responsive Regulator Are Implicated in Nitrogen Starvation-induced Triacylglycerol Accumulation in Chlamydomonas
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March 2012 |
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System Response of Metabolic Networks in Chlamydomonas reinhardtii to Total Available Ammonium
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The Sep15 protein family: Roles in disulfide bond formation and quality control in the endoplasmic reticulum
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Bridging the gap between transcriptome and proteome measurements identifies post-translationally regulated genes
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The plant RWP-RK transcription factors: key regulators of nitrogen responses and of gametophyte development
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July 2014 |
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Identification of regulatory network hubs that control lipid metabolism in Chlamydomonas reinhardtii
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May 2015 |
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Phytozome: a comparative platform for green plant genomics
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Molecular mechanisms of system responses to novel stimuli are predictable from public data
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Gene Ontology Consortium: going forward
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A high-resolution network model for global gene regulation in Mycobacterium tuberculosis
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A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtii
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A miRNA-regulatory network explains how dysregulated miRNAs perturb oncogenic processes across diverse cancers
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A systems level predictive model for global gene regulation of methanogenesis in a hydrogenotrophic methanogen
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An Anaplerotic Role for Mitochondrial Carbonic Anhydrase in Chlamydomonas reinhardtii
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Metabolite Profiling of Chlamydomonas reinhardtii under Nutrient Deprivation
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Functional Analyses of Cytosolic Glucose-6-Phosphate Dehydrogenases and Their Contribution to Seed Oil Accumulation in Arabidopsis
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Tissue-Specific Expression Patterns of Arabidopsis NF-Y Transcription Factors Suggest Potential for Extensive Combinatorial Complexity
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Changes in Transcript Abundance in Chlamydomonas reinhardtii following Nitrogen Deprivation Predict Diversion of Metabolism
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The Regulation of Photosynthetic Structure and Function during Nitrogen Deprivation in Chlamydomonas reinhardtii
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The Role of Pyruvate Dehydrogenase and Acetyl-Coenzyme A Synthetase in Fatty Acid Synthesis in Developing Arabidopsis Seeds
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Antisense Expression of an Arabidopsis Ran Binding Protein Renders Transgenic Roots Hypersensitive to Auxin and Alters Auxin-Induced Root Growth and Development by Arresting Mitotic Progress
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NAB1 Is an RNA Binding Protein Involved in the Light-Regulated Differential Expression of the Light-Harvesting Antenna of Chlamydomonas reinhardtii
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RNA-Seq Analysis of Sulfur-Deprived Chlamydomonas Cells Reveals Aspects of Acclimation Critical for Cell Survival
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The Plastid Isoform of Triose Phosphate Isomerase Is Required for the Postgerminative Transition from Heterotrophic to Autotrophic Growth in Arabidopsis
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January 2010 |
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Stress-Induced GSK3 Regulates the Redox Stress Response by Phosphorylating Glucose-6-Phosphate Dehydrogenase in Arabidopsis
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August 2012 |
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A Galactoglycerolipid Lipase Is Required for Triacylglycerol Accumulation and Survival Following Nitrogen Deprivation in Chlamydomonas reinhardtii
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Systems-Level Analysis of Nitrogen Starvation-Induced Modifications of Carbon Metabolism in a Chlamydomonas reinhardtii Starchless Mutant
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Choreography of Transcriptomes and Lipidomes of Nannochloropsis Reveals the Mechanisms of Oil Synthesis in Microalgae
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April 2014 |
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Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism
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April 2014 |
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Methylcrotonyl-CoA Carboxylase Regulates Triacylglycerol Accumulation in the Model Diatom Phaeodactylum tricornutum
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April 2014 |
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Cytosolic Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenases Affect Arabidopsis Cellular Metabolism and Promote Seed Oil Accumulation
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July 2014 |
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Highly specific gene silencing by artificial microRNAs in the unicellular alga Chlamydomonas reinhardtii: Artificial miRNAs in Chlamydomonas
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A revised mineral nutrient supplement increases biomass and growth rate in Chlamydomonas reinhardtii: A revised mineral nutrient supplement for Chlamydomonas
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Increasing seed oil content in oil-seed rape (Brassica napus L.) by over-expression of a yeast glycerol-3-phosphate dehydrogenase under the control of a seed-specific promoter
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Enhancement of extraplastidic oil synthesis in Chlamydomonas reinhardtii using a type-2 diacylglycerol acyltransferase with a phosphorus starvation-inducible promoter
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A refined genome-scale reconstruction of Chlamydomonas metabolism provides a platform for systems-level analyses
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The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions
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An Outlook on Microalgal Biofuels
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Metabolic Engineering of Escherichia coli for Efficient Conversion of Glycerol to Ethanol
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The Path to Triacylglyceride Obesity in the sta6 Strain of Chlamydomonas reinhardtii
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February 2014 |
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RNA Interference Silencing of a Major Lipid Droplet Protein Affects Lipid Droplet Size in Chlamydomonas reinhardtii
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November 2009 |
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Successful Transient Expression of Cas9 and Single Guide RNA Genes in Chlamydomonas reinhardtii
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September 2014 |
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Rapid Triacylglycerol Turnover in Chlamydomonas reinhardtii Requires a Lipase with Broad Substrate Specificity
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Algal Lipid Bodies: Stress Induction, Purification, and Biochemical Characterization in Wild-Type and Starchless Chlamydomonas reinhardtii
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Structural Correlates of Cytoplasmic and Chloroplast Lipid Body Synthesis in Chlamydomonas reinhardtii and Stimulation of Lipid Body Production with Acetate Boost
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Characterization and differential expression of microRNAs elicited by sulfur deprivation in Chlamydomonas reinhardtii
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Oil accumulation in the model green alga Chlamydomonas reinhardtii: characterization, variability between common laboratory strains and relationship with starch reserves
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January 2011 |
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Potential role of multiple carbon fixation pathways during lipid accumulation in Phaeodactylum tricornutum
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Glycerol and neutral lipid production in the oleaginous marine diatom Phaeodactylum tricornutum promoted by overexpression of glycerol-3-phosphate dehydrogenase
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Lipid accumulation and biosynthesis genes response of the oleaginous Chlorella pyrenoidosa under three nutrition stressors
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January 2014 |
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Systematically programmed adaptive evolution reveals potential role of carbon and nitrogen pathways during lipid accumulation in Chlamydomonas reinhardtii
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September 2014 |
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System-level network analysis of nitrogen starvation and recovery in Chlamydomonas reinhardtii reveals potential new targets for increased lipid accumulation
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Interdependency of Brassinosteroid and Auxin Signaling in Arabidopsis
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A Comprehensive, Quantitative, and Genome-Wide Model of Translation
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Genome-Wide Identification of Regulatory Elements and Reconstruction of Gene Regulatory Networks of the Green Alga Chlamydomonas reinhardtii under Carbon Deprivation
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November 2013 |
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Rapid Induction of Lipid Droplets in Chlamydomonas reinhardtii and Chlorella vulgaris by Brefeldin A
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December 2013 |
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Proteomic Analysis in Nitrogen-Deprived Isochrysis galbana during Lipid Accumulation
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Using Natural Selection to Explore the Adaptive Potential of Chlamydomonas reinhardtii
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A system‐level model for the microbial regulatory genome
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Identification of AGO3-Associated miRNAs and Computational Prediction of Their Targets in the Green Alga Chlamydomonas reinhardtii
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Succinate Overproduction: A Case Study of Computational Strain Design Using a Comprehensive Escherichia coli Kinetic Model
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Post-Transcriptional Control of Chloroplast Gene Expression
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Growth and reproduction of Daphnia galeata in response to changes in fatty acids, phosphorus, and nitrogen in Chlamydomonas reinhardtii
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