Components of the macrolide binding site on the ribosome
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January 1985 |
Sequence selectivity of macrolide-induced translational attenuation
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October 2014 |
Fitness Trade-offs Restrict the Evolution of Resistance to Amphotericin B
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October 2013 |
Revisiting the structures of several antibiotics bound to the bacterial ribosome
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September 2010 |
Free and bound state structures of 6-O-methyl homoerythromycins and epitope mapping of their interactions with ribosomes
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August 2009 |
Synthesis and antibacterial activity of desosamine-modified macrolide derivatives
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July 2012 |
Release of (oligo) peptidyl-tRNA from ribosomes by erythromycin A.
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July 1975 |
Mycoplasma pneumoniae 23S rRNA Gene Mutations and Mechanisms of Macrolide Resistance
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February 2013 |
Optimization of the CHARMM Additive Force Field for DNA: Improved Treatment of the BI/BII Conformational Equilibrium
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December 2011 |
Scalable molecular dynamics with NAMD
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January 2005 |
Density-functional exchange-energy approximation with correct asymptotic behavior
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September 1988 |
Diversity of Ribosomal Mutations Conferring Resistance to Macrolides, Clindamycin, Streptogramin, and Telithromycin in Streptococcus pneumoniae
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January 2002 |
The ABC of Ribosome-Related Antibiotic Resistance
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May 2016 |
Macrolide antibiotics in the ribosome exit tunnel: species-specific binding and action: Species-specific binding and action of macrolides
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December 2011 |
Resistance to the macrolide antibiotic tylosin is conferred by single methylations at 23S rRNA nucleotides G748 and A2058 acting in synergy
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November 2002 |
Mechanisms of resistance to telithromycin in Streptococcus pneumoniae
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July 2005 |
Structures of the Escherichia coli ribosome with antibiotics bound near the peptidyl transferase center explain spectra of drug action
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September 2010 |
Binding and Action of CEM-101, a New Fluoroketolide Antibiotic That Inhibits Protein Synthesis
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September 2010 |
The macrolide-ketolide antibiotic binding site is formed by structures in domains II and V of 23S ribosomal RNA
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January 1999 |
Comparison of simple potential functions for simulating liquid water
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July 1983 |
Binding of Macrolide Antibiotics Leads to Ribosomal Selection against Specific Substrates Based on Their Charge and Size
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August 2016 |
Macrolide-ketolide inhibition of MLS-resistant ribosomes is improved by alternative drug interaction with domain II of 23S rRNA
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April 2000 |
Systematic Approach to Understanding Macrolide−Ribosome Interactions: NMR and Modeling Studies of Oleandomycin and Its Derivatives †
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January 2006 |
Macrolide Resistance Conferred by Base Substitutions in 23S rRNA
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January 2001 |
Binding Site of Macrolide Antibiotics on the Ribosome: New Resistance Mutation Identifies a Specific Interaction of Ketolides with rRNA
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December 2001 |
Automation of the CHARMM General Force Field (CGenFF) I: Bond Perception and Atom Typing
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November 2012 |
Interplay between the Ribosomal Tunnel, Nascent Chain, and Macrolides Influences Drug Inhibition
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May 2010 |
Role of antibiotic ligand in nascent peptide-dependent ribosome stalling
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June 2011 |
Estimates of the Ab Initio Limit for π−π Interactions: The Benzene Dimer
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September 2002 |
Rapid parameterization of small molecules using the force field toolkit
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September 2013 |
Development and testing of a general amber force field
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January 2004 |
Parametrization of macrolide antibiotics using the force field toolkit
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August 2015 |
Automation of the CHARMM General Force Field (CGenFF) II: Assignment of Bonded Parameters and Partial Atomic Charges
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November 2012 |
Improving the Force Field Description of Tyrosine–Choline Cation−π Interactions: QM Investigation of Phenol–N(Me) 4 + Interactions
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October 2016 |
Rethinking the term “pi-stacking”
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January 2012 |
In Vitro Activity of the New Fluoroketolide Solithromycin (CEM-101) against Macrolide-Resistant and -Susceptible Mycoplasma genitalium Strains
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March 2014 |
Accurate Coulomb-fitting basis sets for H to Rn
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January 2006 |
A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu
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April 2010 |
Solution conformation of methylated macrolide antibiotics roxithromycin and erythromycin using NMR and molecular modelling. Ribosome-bound conformation determined by TRNOE and formation of cytochrome P450-metabolite complex
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April 1998 |
The Structures of Four Macrolide Antibiotics Bound to the Large Ribosomal Subunit
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July 2002 |
Mechanisms of SecM-Mediated Stalling in the Ribosome
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July 2012 |
Molecular characterization of macrolide resistance mechanisms among Streptococcus pneumoniae and Streptococcus pyogenes isolated from the PROTEKT 1999-2000 study
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September 2002 |
Benchmarking Density Functional Methods against the S66 and S66x8 Datasets for Non-Covalent Interactions
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November 2011 |
Structural Basis for the Antibiotic Activity of Ketolides and Azalides
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March 2003 |
Erythromycin Binding is Reduced in Ribosomes with Conformational Alterations in the 23 S rRNA Peptidyl Transferase Loop
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August 1993 |
Balanced basis sets of split valence, triple zeta valence and quadruple zeta valence quality for H to Rn: Design and assessment of accuracy
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January 2005 |
Additive CHARMM force field for naturally occurring modified ribonucleotides: CHARMM Potential Energy Function
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February 2016 |
Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus
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October 2015 |
S66: A Well-balanced Database of Benchmark Interaction Energies Relevant to Biomolecular Structures
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July 2011 |
Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density
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January 1988 |
Antimicrobial activity of RU-66647, a new ketolide
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January 1997 |
Particle mesh Ewald: An N ⋅log( N ) method for Ewald sums in large systems
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June 1993 |
Conjugates of Amino Acids and Peptides with 5- O -Mycaminosyltylonolide and Their Interaction with the Ribosomal Exit Tunnel
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journal
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October 2013 |
Distribution of Genes Encoding Resistance to Macrolides, Lincosamides, and Streptogramins among Staphylococci
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journal
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May 1999 |
Optimization of the Additive CHARMM All-Atom Protein Force Field Targeting Improved Sampling of the Backbone ϕ, ψ and Side-Chain χ 1 and χ 2 Dihedral Angles
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August 2012 |
Molecular Insights into 14-Membered Macrolides Using the MM-PBSA Method
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May 2009 |
Structure and energetics of ligand binding to proteins:Escherichia coli dihydrofolate reductase-trimethoprim, a drug-receptor system
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January 1988 |
Erythromycin resistance by ribosome modification
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March 1995 |
Accelerating molecular modeling applications with graphics processors
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January 2007 |
Spectrum and mode of action of azithromycin (CP-62,993), a new 15-membered-ring macrolide with improved potency against gram-negative organisms.
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December 1987 |
Macrolide antibiotics allosterically predispose the ribosome for translation arrest
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June 2014 |
Impact of Ribosomal Modification on the Binding of the Antibiotic Telithromycin Using a Combined Grand Canonical Monte Carlo/Molecular Dynamics Simulation Approach
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June 2013 |
The general mode of translation inhibition by macrolide antibiotics
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October 2014 |
Molecular modeling of 5-desacetylaltohyrtin A, a spongean cytotoxic macrolide
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March 2001 |
Unexpected Substituent Effects in Face-to-Face π-Stacking Interactions
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journal
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October 2003 |
Mutations in 23S rRNA and Ribosomal Protein L4 Account for Resistance in Pneumococcal Strains Selected In Vitro by Macrolide Passage
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August 2000 |
Ab Initio Molecular Orbital and Density Functional Studies on the Stable Structures and Vibrational Properties of trans - and cis -Azobenzenes
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August 2000 |
Mechanisms of Resistance to Macrolides and Lincosamides: Nature of the Resistance Elements and Their Clinical Implications
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February 2002 |
Ketolide resistance in Streptococcus pyogenes correlates with the degree of rRNA dimethylation by Erm : Ketolide resistance and dimethylation by Erm
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September 2005 |
Insights into resistance mechanism of the macrolide biosensor protein MphR(A) binding to macrolide antibiotic erythromycin by molecular dynamics simulation
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November 2015 |
Unnatural Amino Acid Mutagenesis of Green Fluorescent Protein
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November 2002 |
The Mechanism of Action of Macrolides, Lincosamides and Streptogramin B Reveals the Nascent Peptide Exit Path in the Ribosome
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July 2003 |
Erythromycin, carbomycin, and spiramycin inhibit protein synthesis by stimulating the dissociation of peptidyl-tRNA from ribosomes.
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journal
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May 1982 |
Macrolide-Peptide Conjugates as Probes of the Path of Travel of the Nascent Peptides through the Ribosome
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September 2014 |
The calculation of small molecular interactions by the differences of separate total energies. Some procedures with reduced errors
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October 1970 |
Reviving Antibiotics: Efflux Pump Inhibitors That Interact with AcrA, a Membrane Fusion Protein of the AcrAB-TolC Multidrug Efflux Pump
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November 2016 |
Selective Protein Synthesis by Ribosomes with a Drug-Obstructed Exit Tunnel
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October 2012 |
VMD: Visual molecular dynamics
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February 1996 |
CHARMM general force field: A force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields
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January 2009 |