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Title: The response of Chlamydomonas reinhardtii to nitrogen deprivation: a systems biology analysis

Journal Article · · The Plant Journal
DOI:https://doi.org/10.1111/tpj.12747· OSTI ID:1369689
 [1];  [2];  [1];  [3];  [4];  [5];  [3];  [3];  [6];  [1]
  1. Institute of Biological Chemistry, Washington State University, Pullman WA 99164 USA
  2. Donald Danforth Plant Science Center, 975 North Warson Road St Louis MO 63132 USA; National Center of Biomedical Analysis, 27 Taiping Road Beijing 100850 China
  3. Department of Plant Biology, Michigan State University, 612 Wilson Road East Lansing MI 48864 USA
  4. Department of Physiology, Cambridge Advanced Imaging Centre, Anatomy Building Downing Street Cambridge CB2 3DY UK
  5. College of Agricultural, Consumer and Environmental Sciences, New Mexico State University, 1780 E. University Ave Las Cruces New Mexico 88003 USA
  6. Donald Danforth Plant Science Center, 975 North Warson Road St Louis MO 63132 USA; Department of Chemistry, University of North Carolina at Chapel Hill, 125 South Road Chapel Hill NC 27599 USA

Research Organization:
Energy Frontier Research Centers (EFRC) (United States). Center for Advanced Biofuel Systems (CABS)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
DOE Contract Number:
SC0001295
OSTI ID:
1369689
Journal Information:
The Plant Journal, Vol. 81, Issue 4; Related Information: CABS partners with the Donald Danforth Plant Science Center (lead); Michigan State University; New Mexico Consortium; University of Nebraska; University of Missouri – St. Louis; Washington State University; ISSN 0960-7412
Publisher:
Society for Experimental Biology
Country of Publication:
United States
Language:
English

References (38)

System Response of Metabolic Networks in Chlamydomonas reinhardtii to Total Available Ammonium journal July 2012
The induction of allophanate lyase during the vegetative cell cycle in light-synchronized cultures of Chlamydomonas reinhardi journal July 1975
Degradation of pyrimidines and pyrimidine analogs—Pathways and mutual influences journal January 1980
Systems-Level Analysis of Nitrogen Starvation-Induced Modifications of Carbon Metabolism in a Chlamydomonas reinhardtii Starchless Mutant journal November 2013
The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions journal October 2007
Three Acyltransferases and Nitrogen-responsive Regulator Are Implicated in Nitrogen Starvation-induced Triacylglycerol Accumulation in Chlamydomonas journal March 2012
Comprehensive Comparison of iTRAQ and Label-free LC-Based Quantitative Proteomics Approaches Using Two Chlamydomonas reinhardtii Strains of Interest for Biofuels Engineering journal December 2011
The biochemistry of nitrogen mobilization: purine ring catabolism journal July 2011
Large-scale biodiesel production from microalgaChlorella protothecoides through heterotrophic cultivation in bioreactors journal January 2007
Characterization of microalgal lipid feedstock by direct-infusion FT-ICR mass spectrometry journal January 2013
Microalgae for biodiesel production and other applications: A review journal January 2010
Increased Lipid Accumulation in the Chlamydomonas reinhardtii sta7-10 Starchless Isoamylase Mutant and Increased Carbohydrate Synthesis in Complemented Strains journal June 2010
Regulation by Polyamines of Ornithine Decarboxylase Activity and Cell Division in the Unicellular Green Alga Chlamydomonas reinhardtii journal March 2002
Genome-Based Examination of Chlorophyll and Carotenoid Biosynthesis in Chlamydomonas reinhardtii journal April 2005
Metabolite Profiling of Chlamydomonas reinhardtii under Nutrient Deprivation journal November 2005
Functions of amine oxidases in plant development and defence journal February 2006
Lipids and lipid metabolism in eukaryotic algae journal March 2006
High quality metabolomic data for Chlamydomonas reinhardtii journal January 2008
Retracted: The Chlamydomonas reinhardtii Organellar Genomes Respond Transcriptionally and Post-Transcriptionally to Abiotic Stimuli journal October 2002
Metabolic and gene expression changes triggered by nitrogen deprivation in the photoautotrophically grown microalgae Chlamydomonas reinhardtii and Coccomyxa sp. C-169 journal March 2012
Structural Correlates of Cytoplasmic and Chloroplast Lipid Body Synthesis in Chlamydomonas reinhardtii and Stimulation of Lipid Body Production with Acetate Boost journal October 2011
Integrated Quantitative Analysis of Nitrogen Stress Response in Chlamydomonas reinhardtii Using Metabolite and Protein Profiling journal February 2014
Metabolomics- and Proteomics-Assisted Genome Annotation and Analysis of the Draft Metabolic Network of Chlamydomonas reinhardtii journal May 2008
Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses journal January 2010
Algal Lipid Bodies: Stress Induction, Purification, and Biochemical Characterization in Wild-Type and Starchless Chlamydomonas reinhardtii journal October 2009
Compartment-specific labeling information in 13C metabolic flux analysis of plants journal August 2007
Expression of β-carotene hydroxylase gene (crtR-B) from the green alga Haematococcus pluvialis in chloroplasts of Chlamydomonas reinhardtii journal January 2007
Lack of isocitrate lyase in Chlamydomonas leads to changes in carbon metabolism and in the response to oxidative stress under mixotrophic growth journal January 2014
Microalgal triacylglycerols as feedstocks for biofuel production: perspectives and advances journal May 2008
Systems Biology Approach in Chlamydomonas Reveals Connections between Copper Nutrition and Multiple Metabolic Steps journal April 2011
A systems-wide comparison of red rice (Oryza longistaminata) tissues identifies rhizome specific genes and proteins that are targets for cultivated rice improvement journal January 2014
Subcellular localization and light-dark control of ornithine decarboxylase in the unicellular green alga Chlamydomonas reinhardtii journal April 2000
RNA Interference Silencing of a Major Lipid Droplet Protein Affects Lipid Droplet Size in Chlamydomonas reinhardtii journal November 2009
Conservation and degradation of cytoplasmic and chloroplast ribosomes in Chlamydomonas reinhardtii journal May 1971
Gametic differentiation in Chlamydomonas reinhardtii. I. Production of gametes and their fine structure journal November 1975
Changes in Transcript Abundance in Chlamydomonas reinhardtii following Nitrogen Deprivation Predict Diversion of Metabolism journal October 2010
Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism journal April 2014
The Path to Triacylglyceride Obesity in the sta6 Strain of Chlamydomonas reinhardtii journal February 2014

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