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Thermodynamically controlled preservation of organic carbon in floodplains

Journal Article · · Nature Geoscience
DOI:https://doi.org/10.1038/ngeo2940· OSTI ID:1363868
 [1];  [2];  [3];  [2];  [4];  [2];  [5]
  1. SLAC National Accelerator Lab., Menlo Park, CA (United States). Stanford Synchrotron Radiation Lightsource; Stanford Univ., CA (United States). Earth System Science Dept.
  2. SLAC National Accelerator Lab., Menlo Park, CA (United States). Stanford Synchrotron Radiation Lightsource
  3. Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Environmental Molecular Science Lab.
  4. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Climate and Ecosystem Sciences Division
  5. Stanford Univ., CA (United States). Earth System Science Dept.
Organic matter decomposition in soils and terrestrial sediments has a prominent role in the global carbon cycle. Carbon stocks in anoxic environments, such as wetlands and the subsurface of floodplains, are large and presumed to decompose slowly. The degree of microbial respiration in anoxic environments is typically thought to depend on the energetics of available terminal electron acceptors such as nitrate or sulfate; microbes couple the reduction of these compounds to the oxidation of organic carbon. But, it is also possible that the energetics of the organic carbon itself can determine whether it is decomposed. We examined water-soluble organic carbon by Fourier-transform ion-cyclotron-resonance mass spectrometry to compare the chemical composition and average nominal oxidation state of carbon—a metric reflecting whether microbial oxidation of organic matter is thermodynamically favourable—in anoxic (sulfidic) and oxic (non-sulfidic) floodplain sediments. We also observed distinct minima in the average nominal oxidation state of water-soluble carbon in sediments exhibiting anoxic, sulfate-reducing conditions, suggesting preservation of carbon compounds with nominal oxidation states below the threshold that makes microbial sulfate reduction thermodynamically favourable. Finally, we show that thermodynamic limitations constitute an important complement to other mechanisms of carbon preservation, such as enzymatic restrictions and mineral association, within anaerobic environments.
Research Organization:
SLAC National Accelerator Laboratory (SLAC), Menlo Park, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)
Grant/Contract Number:
AC02-76SF00515; AC02-05CH11231
OSTI ID:
1363868
Alternate ID(s):
OSTI ID: 1773369
OSTI ID: 1368457
OSTI ID: 1458494
Journal Information:
Nature Geoscience, Journal Name: Nature Geoscience Journal Issue: 6 Vol. 10; ISSN 1752-0894
Publisher:
Nature Publishing GroupCopyright Statement
Country of Publication:
United States
Language:
English

References (47)

From mass to structure: an aromaticity index for high-resolution mass data of natural organic matter journal February 2006
From mass to structure: an aromaticity index for high-resolution mass data of natural organic matter journal December 2015
The retention of organic matter in soils journal February 1988
Distribution and Characteristics of Dissolved Organic Matter in Mangrove Sediment Pore Waters along the Coastline of French Guiana journal July 2006
Role of proteins in soil carbon and nitrogen storage: controls on persistence journal March 2007
A conceptual model of organo-mineral interactions in soils: self-assembly of organic molecular fragments into zonal structures on mineral surfaces journal June 2007
Paradigm shifts in soil organic matter research affect interpretations of aquatic carbon cycling: transcending disciplinary and ecosystem boundaries journal January 2014
Are oxygen limitations under recognized regulators of organic carbon turnover in upland soils? journal January 2016
Deep soil organic matter—a key but poorly understood component of terrestrial C cycle journal May 2010
Soil Organic Carbon Stocks in a Large Eutrophic Floodplain Forest of the Southeastern Atlantic Coastal Plain, USA journal January 2015
Early oxidation of organic matter in pelagic sediments of the eastern equatorial Atlantic: suboxic diagenesis journal July 1979
Redox zonation: Equilibrium constraints on the Fe(III)/SO4-reduction interface journal September 1996
Organic carbon and sulphur compounds in wetland soils: insights on structure and transformation processes using K-edge XANES and NMR spectroscopy journal July 2003
The molecularly-uncharacterized component of nonliving organic matter in natural environments journal October 2000
How do long-term development and periodical changes of river–floodplain systems affect the fate of contaminants? Results from European rivers journal December 2009
Predicting the rate of microbial respiration in geochemical environments journal March 2005
Organic carbon distribution, speciation, and elemental correlations within soil microaggregates: Applications of STXM and NEXAFS spectroscopy journal November 2007
Degradation of natural organic matter: A thermodynamic analysis journal April 2011
EXAFS analysis of iron cycling in mangrove sediments downstream a lateritized ultramafic watershed (Vavouto Bay, New Caledonia) journal July 2014
Biogeochemistry of dissolved organic matter in an anoxic intertidal creek bank journal September 2014
Strengthening the soil organic carbon pool by increasing contributions from recalcitrant aliphatic bio(macro)molecules journal November 2007
C 1s K-edge near edge X-ray absorption fine structure (NEXAFS) spectroscopy for characterizing functional group chemistry of black carbon journal October 2011
Characterization of dissolved organic matter in Lake Superior and its watershed using ultrahigh resolution mass spectrometry journal February 2012
Microbially available carbon in buried riparian soils in a glaciated landscape journal January 2008
Soil enzymes in a changing environment: Current knowledge and future directions journal March 2013
Soil burial contributes to deep soil organic carbon storage journal February 2014
Bacterial Metabolism journal February 1980
Riverine flood plains: present state and future trends journal September 2002
Graphical Method for Analysis of Ultrahigh-Resolution Broadband Mass Spectra of Natural Organic Matter, the Van Krevelen Diagram journal October 2003
Automated Analysis of Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectra of Natural Organic Matter journal July 2006
Advanced Solvent Based Methods for Molecular Characterization of Soil Organic Matter by High-Resolution Mass Spectrometry journal April 2015
Physico-Chemical Heterogeneity of Organic-Rich Sediments in the Rifle Aquifer, CO: Impact on Uranium Biogeochemistry journal December 2015
XAS Evidence of As(V) Association with Iron Oxyhydroxides in a Contaminated Soil at a Former Arsenical Pesticide Processing Plant journal December 2005
Sulfur Speciation in Soil by S K -Edge XANES Spectroscopy: Comparison of Spectral Deconvolution and Linear Combination Fitting journal April 2011
Mineralization of ancient carbon in the subsurface of riparian forests: ANCIENT RIPARIAN CARBON MINERALIZATION journal May 2008
Persistence of soil organic matter as an ecosystem property journal October 2011
Legacy of human-induced C erosion and burial on soil-atmosphere C exchange journal November 2012
Changes in peat chemistry associated with permafrost thaw increase greenhouse gas production journal April 2014
ATHENA , ARTEMIS , HEPHAESTUS : data analysis for X-ray absorption spectroscopy using IFEFFIT journal June 2005
Bacterial Metabolism journal June 1947
Hailstones: A Window into the Microbial and Chemical Inventory of a Storm Cloud journal January 2013
Spatial Distribution of Carbon in the Subsurface of Riparian Zones journal January 2009
Carbon (1s) NEXAFS Spectroscopy of Biogeochemically Relevant Reference Organic Compounds journal January 2009
Illuminated darkness: Molecular signatures of Congo River dissolved organic matter and its photochemical alteration as revealed by ultrahigh precision mass spectrometry journal May 2010
Persistence of soil organic matter as an ecosystem property text January 2011
C 1s K-edge near edge X-ray absorption fine structure (NEXAFS) spectroscopy for characterizing functional group chemistry of black carbon text January 2011
Bacterial Metabolism journal July 1940

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Elevated moisture stimulates carbon loss from mineral soils by releasing protected organic matter journal November 2017
River channel connectivity shifts metabolite composition and dissolved organic matter chemistry journal January 2019
Abundance and Distribution of Microbial Cells and Viruses in an Alluvial Aquifer journal July 2017
Changes in Carbon Oxidation State of Metagenomes Along Geochemical Redox Gradients journal February 2019
Pulse of dissolved organic matter alters reciprocal carbon subsidies between autotrophs and bacteria in stream food webs journal January 2020
High variability in iron-bound organic carbon among five boreal lake sediments journal May 2018
Hydrogeomorphic controls on soil carbon composition in two classes of subalpine wetlands journal September 2019
Thermodynamic Control of the Carbon Budget of a Peatland journal June 2018
Dissolved Organic Matter Chemistry and Transport Along an Arctic Tundra Hillslope journal January 2019
Hyporheic Zone Microbiome Assembly Is Linked to Dynamic Water Mixing Patterns in Snowmelt‐Dominated Headwater Catchments journal November 2019
Reduction‐Oxidation Potential and Dissolved Organic Matter Composition in Northern Peat Soil: Interactive Controls of Water Table Position and Plant Functional Groups journal November 2019
Persistent organic matter in oxic subseafloor sediment journal January 2019
Composition-Dependent Sorptive Fractionation of Anthropogenic Dissolved Organic Matter by Fe(III)-Montmorillonite journal March 2018
Co-located contemporaneous mapping of morphological, hydrological, chemical, and biological conditions in a 5th-order mountain stream network, Oregon, USA text January 2019
Molecular characterization of organic matter mobilized from Bangladeshi aquifer sediment: tracking carbon compositional change during microbial utilization journal January 2018
Shifting mineral and redox controls on carbon cycling in seasonally flooded mineral soils journal January 2019
Spatial gradients in the characteristics of soil-carbon fractions are associated with abiotic features but not microbial communities journal January 2019
Modeling anaerobic soil organic carbon decomposition in Arctic polygon tundra: insights into soil geochemical influences on carbon mineralization journal January 2019
Molecular characterization of organic matter mobilized from Bangladeshi aquifer sediment: tracking carbon compositional change during microbial utilization posted_content July 2017
Modeling anaerobic soil organic carbon decomposition in Arctic polygon tundra: insights into soil geochemical influences on carbon mineralization posted_content February 2018
Co-located contemporaneous mapping of morphological, hydrological, chemical, and biological conditions in a 5th-order mountain stream network, Oregon, USA journal January 2019
Geomorphic regulation of floodplain soil organic carbon concentration in watersheds of the Rocky and Cascade Mountains, USA posted_content April 2018
Geomorphic regulation of floodplain soil organic carbon concentration in watersheds of the Rocky and Cascade Mountains, USA journal January 2018

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