Cheetah : software for high-throughput reduction and analysis of serial femtosecond X-ray diffraction data
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May 2014 |
CrystFEL : a software suite for snapshot serial crystallography
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March 2012 |
Time-resolved Laue diffraction of excited species at atomic resolution: 100 ps single-pulse diffraction of the excited state of the organometallic complex Rh2(μ-PNP)2(PNP)2·BPh4
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January 2011 |
Overview of the CCP 4 suite and current developments
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March 2011 |
Photoisomerization and Photoionization of the Photoactive Yellow Protein Chromophore in Solution
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April 2004 |
Time-resolved pump-probe experiments at the LCLS
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January 2010 |
The hydration shell of myoglobin
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November 1992 |
GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
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February 2008 |
Mapping molecular motions leading to charge delocalization with ultrabright electrons
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April 2013 |
Approximate switching algorithms for trajectory surface hopping
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July 2008 |
Spectroscopic Studies of Model Photo-Receptors: Validation of a Nanosecond Time-Resolved Micro-Spectrophotometer Design Using Photoactive Yellow Protein and α-Phycoerythrocyanin
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September 2013 |
GROMACS: Fast, flexible, and free
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January 2005 |
Coherent oscillations in ultrafast fluorescence of photoactive yellow protein
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December 2007 |
Contrasting the Excited-State Dynamics of the Photoactive Yellow Protein Chromophore: Protein versus Solvent Environments
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September 2004 |
Comparison of simple potential functions for simulating liquid water
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July 1983 |
Injector for scattering measurements on fully solvated biospecies
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March 2012 |
Sub-femtosecond precision measurement of relative X-ray arrival time for free-electron lasers
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July 2014 |
A new mixing of Hartree–Fock and local density‐functional theories
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January 1993 |
Bicycle-pedal model for the first step in the vision process
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April 1976 |
Frequency-resolved optical gating and single-shot spectral measurements reveal fine structure in microstructure-fiber continuum
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January 2002 |
Molecular Basis of Visual Excitation
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October 1968 |
Ultrafast photoinduced reaction dynamics of photoactive yellow protein (PYP): observation of coherent oscillations in the femtosecond fluorescence decay dynamics
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January 2002 |
Femtosecond Spectroscopic Observations of Initial Intermediates in the Photocycle of the Photoactive Yellow Protein from Ectothiorhodospira halophila
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August 1999 |
Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein
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December 2014 |
Visualizing Photochemical Dynamics in Solution through Picosecond X-Ray Scattering
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October 2001 |
Volume-conserving trans–cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
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February 2013 |
Excited-state structure by time-resolved X-ray diffraction
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February 2002 |
UCSF Chimera?A visualization system for exploratory research and analysis
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January 2004 |
Quantum Mechanical Continuum Solvation Models
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August 2005 |
Selective Excitation of Vibrational Wave Packet Motion Using Chirped Pulses
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November 1995 |
Ultrafast X-ray Diffraction of Transient Molecular Structures in Solution
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journal
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August 2005 |
Post-refinement method for snapshot serial crystallography
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July 2014 |
Femtochemistry: Atomic-Scale Dynamics of the Chemical Bond Using Ultrafast Lasers (Nobel Lecture)
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August 2000 |
From The Cover: Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds
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May 2005 |
Extended multi-configuration quasi-degenerate perturbation theory: The new approach to multi-state multi-reference perturbation theory
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June 2011 |
Photoisomerisation quantum yield and non-linear cross-sections with femtosecond excitation of the photoactive yellow protein
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January 2012 |
A complete active space SCF method (CASSCF) using a density matrix formulated super-CI approach
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journal
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May 1980 |
Photoactivation of the Photoactive Yellow Protein: Why Photon Absorption Triggers a Trans-to-Cis Isomerization of the Chromophore in the Protein
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journal
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April 2004 |
Application of Singular Value Decomposition to the Analysis of Time-Resolved Macromolecular X-Ray Data
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March 2003 |
Canonical sampling through velocity rescaling
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journal
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January 2007 |
Watching a signaling protein function in real time via 100-ps time-resolved Laue crystallography
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journal
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November 2012 |
Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density
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journal
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January 1988 |
LINCS: A linear constraint solver for molecular simulations
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September 1997 |
Low-barrier hydrogen bond in photoactive yellow protein
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journal
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January 2009 |
Visualizing a protein quake with time-resolved X-ray scattering at a free-electron laser
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journal
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August 2014 |
Control of selectivity of chemical reaction via control of wave packet evolution
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November 1985 |
REFMAC 5 for the refinement of macromolecular crystal structures
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March 2011 |
Quantum model simulation of complete S0→S1 population transfer by means of intense laser pulses with opposite chirp
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November 2000 |
Ultrafast myoglobin structural dynamics observed with an X-ray free-electron laser
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journal
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April 2015 |
Force Spectroscopy of Single Biomolecules
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journal
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March 2002 |
Use of Non-crystallographic Symmetry in Protein Structure Refinement
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journal
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July 1996 |
Direct Observation of Cooling of Heme Upon Photodissociation of Carbonmonoxy Myoglobin
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journal
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October 1997 |
Short hydrogen bonds in photoactive yellow protein
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journal
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May 2004 |
The CSPAD megapixel x-ray camera at LCLS
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conference
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October 2012 |
Investigations of ultrafast nuclear response induced by resonant and nonresonant laser pulses
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journal
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April 2001 |
Application of chirped ultrashort pulses for generating large-amplitude ground-state vibrational coherence: a computer simulation
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journal
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January 1990 |
Myoglobin Dynamics Measured With Vibrational Echo Experiments
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journal
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January 1999 |
The interpretation of protein structures: Estimation of static accessibility
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journal
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February 1971 |
Solvent cage effects and chemical dynamics in liquids
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journal
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April 1991 |
Settle: An analytical version of the SHAKE and RATTLE algorithm for rigid water models
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journal
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October 1992 |
Initial Steps of Signal Generation in Photoactive Yellow Protein Revealed with Femtosecond Mid-Infrared Spectroscopy †
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journal
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September 2003 |
Picosecond X-Ray Diffraction Probed Transient Structural Changes in Organic Solids
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journal
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March 2001 |
Tools for macromolecular model building and refinement into electron cryo-microscopy reconstructions
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journal
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January 2015 |
Direct observation of global protein motion in hemoglobin and myoglobin on picosecond time scales
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journal
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March 1991 |
Structural Evolution of the Chromophore in the Primary Stages of Trans/Cis Isomerization in Photoactive Yellow Protein
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journal
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December 2005 |
Spectral encoding of x-ray/optical relative delay
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journal
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January 2011 |
Photochemical reactions in biological systems: probing the effect of the environment by means of hybrid quantum chemistry/molecular mechanics simulations
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journal
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January 2012 |
Protein energy landscapes determined by five-dimensional crystallography
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journal
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November 2013 |
3V: cavity, channel and cleft volume calculator and extractor
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journal
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May 2010 |
A smooth particle mesh Ewald method
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journal
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November 1995 |
CHEMISTRY: Following the Flow of Energy in Biomolecules
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journal
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November 2005 |
A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations
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journal
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October 2003 |
The Protein Data Bank
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journal
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May 2002 |
Measuring ultrashort laser pulses in the time-frequency domain using frequency-resolved optical gating
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journal
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September 1997 |
Incoherent Manipulation of the Photoactive Yellow Protein Photocycle with Dispersed Pump-Dump-Probe Spectroscopy
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journal
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September 2004 |
Chromophore Dynamics in the PYP Photocycle from Femtosecond Stimulated Raman Spectroscopy
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journal
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January 2014 |
Ultrafast infrared spectroscopy reveals a key step for successful entry into the photocycle for photoactive yellow protein
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journal
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October 2006 |
Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation
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journal
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September 2015 |