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Title: A guide to phylogenetic metrics for conservation, community ecology and macroecology: A guide to phylogenetic metrics for ecology

Journal Article · · Biological Reviews
DOI:https://doi.org/10.1111/brv.12252· OSTI ID:1235374
 [1];  [2];  [3];  [4];  [5];  [6];  [7];  [8];  [9];  [10];  [11];  [12];  [13];  [14];  [15];  [16]
  1. Department of Ecology and Evolutionary Biology, University of Colorado, Box 334 Boulder CO 80309-0334 U.S.A.
  2. Biological Sciences, University of Toronto-Scarborough, Scarborough M1C 1A4 Canada, Stake Key Laboratory of Biocontrol, Key Laboratory of Biodiversity Dynamics and Conservation of Guangdong, Higher Education Institutes, College of Ecology and Evolution, Sun Yat-sen University, Guangzhou PR China
  3. CIBIO/InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos da Universidade do Porto, 4485-661 Vairão Portugal
  4. Department of Biology, McGill University, Montréal H3A 1B1 Canada, African Centre for DNA Barcoding, University of Johannesburg, PO Box 524 Johannesburg 2006 South Africa
  5. CSIRO Ecosystem Sciences, Climate Adaptation Flagship, GPO BOX 1600 Canberra 2601 Australia
  6. Biodiversity & Climate Research Centre (BiK-F) and Senckenberg Gesellschaft für Naturforschung, 60325 Frankfurt am Main Germany, Institute of Ecology, Evolution and Diversity, Goethe University, 60438 Frankfurt Germany
  7. School of Geography and the Environment, University of Oxford, Oxford OX1 3QY U.K.
  8. Department of Ecological Sciences - Animal Ecology, Vrije Universiteit, Amsterdam Netherlands, Center for Biodiversity, Department of Biology, Temple University, Suite 502 Philadelphia PA 19122 U.S.A.
  9. Ecology & Evolutionary Biology, University of Toronto, Room 3055 Toronto M5S 3B2 Canada
  10. Department of Biology, Simon Fraser University, Burnaby V5A 1S6 Canada
  11. Centre of Ecology and Conservation Sciences (UMR 7204 CESCO), Museum National d'Histoire Naturelle, Paris France, Department of Zoology, University of Oxford, Oxford OX1 3QY UK
  12. German Centre of Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e DE-04103 Leipzig Germany, Geobotany and Botanical Garden, Institute of Biology, Martin Luther University, Halle-Wittenberg, DE-06108 Halle (Saale) Germany, Department of Computer Science, Martin-Luther-University, Halle-Wittenberg, DE-06120 Halle (Saale) Germany
  13. Centre for Biodiversity and Environmental Research, Department of Genetics, Evolution and Environment, University College London, London WC1E 6BT U.K.
  14. Research School of Biology, Australian National University, Acton 2601 Australia
  15. German Centre of Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e DE-04103 Leipzig Germany
  16. Laboratoire d'Ecologie Alpine (LECA), CNRS - Université Grenoble Alpes (UMR 5553), BP 53 38041 Grenoble Cedex 9 France

Sponsoring Organization:
USDOE Office of Nuclear Energy (NE), Fuel Cycle Technologies (NE-5)
Grant/Contract Number:
SFRH/BPD/74423/2010
OSTI ID:
1235374
Alternate ID(s):
OSTI ID: 1350159
Journal Information:
Biological Reviews, Journal Name: Biological Reviews Vol. 92 Journal Issue: 2; ISSN 1464-7931
Publisher:
Wiley-BlackwellCopyright Statement
Country of Publication:
Country unknown/Code not available
Language:
English
Citation Metrics:
Cited by: 453 works
Citation information provided by
Web of Science

References (54)

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Experimental evidence that evolutionary relatedness does not affect the ecological mechanisms of coexistence in freshwater green algae journal September 2013
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Phylogenetic patterns are not proxies of community assembly mechanisms (they are far better) journal October 2014
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Plant extinctions and introductions lead to phylogenetic and taxonomic homogenization of the European flora journal December 2009
What's on the horizon for macroecology? journal May 2012
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UniFrac: a New Phylogenetic Method for Comparing Microbial Communities journal December 2005
Testing macro–evolutionary models using incomplete molecular phylogenies journal November 2000
Consequences of climate change on the tree of life in Europe journal February 2011
A New Phylogenetic Diversity Measure Generalizing the Shannon Index and Its Application to Phyllostomid Bats journal August 2009
Measuring diversity: the importance of species similarity journal March 2012
Quantitative and Qualitative   Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities journal January 2007
Opposing effects of competitive exclusion on the phylogenetic structure of communities: Phylogeny and coexistence journal June 2010
The global diversity of birds in space and time journal October 2012
The Latitudinal Gradient in Recent Speciation and Extinction Rates of Birds and Mammals journal March 2007
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Functional Traits and Niche-Based Tree Community Assembly in an Amazonian Forest journal October 2008
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Microbes on mountainsides: Contrasting elevational patterns of bacterial and plant diversity journal August 2008
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Phylogenetic turnover patterns consistent with niche conservatism in montane plant species journal April 2015
Entropy and diversity journal May 2006
Associating microbiome composition with environmental covariates using generalized UniFrac distances journal June 2012
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Assembly Rules, Null Models, and Trait Dispersion: New Questions from Old Patterns journal October 1995
What to protect?—Systematics and the agony of choice journal January 1991
A new dynamic null model for phylogenetic community structure journal January 2015

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