Synthesising topological links

Baas, Nils A.; Seeman, Nadrian C.; Stacey, Andrew

doi:10.1007/s10910-014-0420-3

Title: Synthesising topological links

Journal Article · Tue Oct 14 00:00:00 EDT 2014 · Journal of Mathematical Chemistry

DOI:https://doi.org/10.1007/s10910-014-0420-3· OSTI ID:1343561

Baas, Nils A. ^[1]; Seeman, Nadrian C. ^[2]; Stacey, Andrew ^[1]

Norwegian University of Science and Technology, Trondheim (Norway). Department of Mathematical Sciences
New York Univ. (NYU), NY (United States). Department of Chemistry

We discuss the chemical synthesis of topological links, in particular higher order links which have the Brunnian property (namely that removal of any one component unlinks the entire system). Furthermore, we suggest how to obtain both two dimensional and three dimensional objects (surfaces and solids, respectively) which also have this Brunnian property.

View Accepted Manuscript (DOE)

Cite

Export

Save

Research Organization:: New York Univ., NY (United States)

Sponsoring Organization:: USDOE Office of Science (SC); Inst. for Advanced Study, Princeton, NJ (United States); National Institutes of Health (NIH); National Science Foundation (NSF); US Army Research Office (ARO); US Department of the Navy, Office of Naval Research (ONR); Gordon and Betty Moore Foundation; Research Council of Norway

Grant/Contract Number:: SC0007991; GM-29554; CMMI-1120890; EFRI-1332411; CCF-1117210; MURI W911NF-11-1-0024; N000141110729; N000140911118; 3849; 213458

OSTI ID:: 1343561

Alternate ID(s):: OSTI ID: 1454429

Journal Information:: Journal of Mathematical Chemistry, Vol. 53, Issue 1; ISSN 0259-9791

Publisher:: SpringerCopyright Statement

Country of Publication:: United States

Language:: English

Citation Metrics:

Cited by: 10 works

Citation information provided by
Web of Science

References (21)

The energy spectrum of knots and links Moffatt, H. K. Nature, Vol. 347, Issue 6291 https://doi.org/10.1038/347367a0	journal	September 1990
Automatic Molecular Weaving Prototyped by Using Single-Stranded DNA Ciengshin, Tanashaya; Sha, Ruojie; Seeman, Nadrian C. Angewandte Chemie International Edition, Vol. 50, Issue 19 https://doi.org/10.1002/anie.201007685	journal	April 2011
Description of the topological entanglement of DNA catenanes and knots by a powerful method involving strand passage and recombination White, James H.; Millett, K. C.; Cozzarelli, Nicholas R. Journal of Molecular Biology, Vol. 197, Issue 3 https://doi.org/10.1016/0022-2836(87)90566-3	journal	October 1987
Lensless imaging of magnetic nanostructures by X-ray spectro-holography Eisebitt, S.; Lüning, J.; Schlotter, W. F. Nature, Vol. 432, Issue 7019 https://doi.org/10.1038/nature03139	journal	December 2004
Assembly of Borromean rings from DNA Mao, Chengde; Sun, Weiqiong; Seeman, Nadrian C. Nature, Vol. 386, Issue 6621 https://doi.org/10.1038/386137b0	journal	March 1997
Molecular Structure of Nucleic Acids: A Structure for Deoxyribose Nucleic Acid Watson, J. D.; Crick, F. H. C. Nature, Vol. 171, Issue 4356 https://doi.org/10.1038/171737a0	journal	April 1953
High-Resolution Imaging by Fourier Transform X-ray Holography McNulty, I.; Kirz, J.; Jacobsen, C. Science, Vol. 256, Issue 5059 https://doi.org/10.1126/science.256.5059.1009	journal	May 1992
Chemical Topology ¹ Frisch, H. L.; Wasserman, E. Journal of the American Chemical Society, Vol. 83, Issue 18 https://doi.org/10.1021/ja01479a015	journal	September 1961
X-ray analysis on the nanogram to microgram scale using porous complexes Inokuma, Yasuhide; Yoshioka, Shota; Ariyoshi, Junko Nature, Vol. 495, Issue 7442 https://doi.org/10.1038/nature11990	journal	March 2013
A synthetic DNA molecule in three knotted topologies Du, Shou Ming; Stollar, B. David; Seeman, Nadrian C. Journal of the American Chemical Society, Vol. 117, Issue 4 https://doi.org/10.1021/ja00109a002	journal	February 1995
Design and synthesis of a knot from single-stranded DNA Mueller, John E.; Du, Shou Ming; Seeman, Nadrian C. Journal of the American Chemical Society, Vol. 113, Issue 16 https://doi.org/10.1021/ja00016a077	journal	July 1991
On the chemical synthesis of new topological structures Baas, Nils A.; Seeman, Nadrian C. Journal of Mathematical Chemistry, Vol. 50, Issue 1 https://doi.org/10.1007/s10910-011-9907-3	journal	September 2011
Nucleic acid junctions and lattices Seeman, Nadrian C. Journal of Theoretical Biology, Vol. 99, Issue 2 https://doi.org/10.1016/0022-5193(82)90002-9	journal	November 1982
Molecular Borromean Rings Chichak, K. S. Science, Vol. 304, Issue 5675 https://doi.org/10.1126/science.1096914	journal	May 2004
The Chemistry and Biology of Left-Handed Z-DNA Rich, A.; Nordheim, A.; Wang, A. H. J. Annual Review of Biochemistry, Vol. 53, Issue 1 https://doi.org/10.1146/annurev.bi.53.070184.004043	journal	June 1984
From molecular to macroscopic via the rational design of a self-assembled 3D DNA crystal Zheng, Jianping; Birktoft, Jens J.; Chen, Yi Nature, Vol. 461, Issue 7260 https://doi.org/10.1038/nature08274	journal	September 2009
DNA in a material world Seeman, Nadrian C. Nature, Vol. 421, Issue 6921 https://doi.org/10.1038/nature01406	journal	January 2003
DNA Nicks and Nodes and Nanotechnology Seeman, Nadrian C. Nano Letters, Vol. 1, Issue 1 https://doi.org/10.1021/nl000182v	journal	January 2001
Tight Single-Stranded DNA Knots Wang, Hui; Du, Shou Ming; Seeman, Nadrian C. Journal of Biomolecular Structure and Dynamics, Vol. 10, Issue 5 https://doi.org/10.1080/07391102.1993.10508679	journal	April 1993
On structure and organization: an organizing principle Baas, Nils A. International Journal of General Systems, Vol. 42, Issue 2 https://doi.org/10.1080/03081079.2012.728406	journal	February 2013
The design of single-stranded nucleic acid knots Seeman, Nadrian C. Molecular Engineering, Vol. 2, Issue 3 https://doi.org/10.1007/BF00999532	journal	January 1992

Cited By (1)

Introduction Iordache, Octavian Implementing Polytope Projects for Smart Systems https://doi.org/10.1007/978-3-319-52551-8_1	book	January 2017

Similar Records

The unusual and dynamic character of PX-DNA

Journal Article · Wed Jul 15 00:00:00 EDT 2015 · Nucleic Acids Research · OSTI ID:1343561

Niu, Dong; Jiang, Hualin; Sha, Ruojie; +2 more

Reconfigurable Two-Dimensional DNA Lattices: Static and Dynamic Angle Control

Journal Article · Fri Oct 01 00:00:00 EDT 2021 · Angewandte Chemie (International Edition) · OSTI ID:1343561

Wang, Wen; Chen, Chunyu; Vecchioni, Simon; +6 more

Mutations in artificial self-replicating tiles: A step toward Darwinian evolution

Journal Article · Mon Dec 06 00:00:00 EST 2021 · Proceedings of the National Academy of Sciences of the United States of America · OSTI ID:1343561

Zhou, Feng; Sha, Ruojie; Ni, Heng; +2 more

Related Subjects

97 MATHEMATICS AND COMPUTING
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY
Synthetic DNA topology of links
Brunnian links
Carpets and solids
Hopf links
Synthesizing double stranded DNA nodes

Title: Synthesising topological links

Citation Formats

References (21)

Cited By (1)

Similar Records

Related Subjects