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Microbial communities biostimulated by ethanol during uranium (VI) bioremediation in contaminated sediment as shown by stable isotope probing

Journal Article · · Frontiers of Environmental Science & Engineering
 [1];  [2];  [3];  [4];  [5];  [6];  [3];  [7];  [5];  [2];  [3]
  1. Michigan State Univ., East Lansing, MI (United States); Univ. of Alaska Fairbanks, Fairbanks, AK (United States)
  2. Stanford Univ., Stanford, CA (United States)
  3. Michigan State Univ., East Lansing, MI (United States)
  4. Institute of Chemical Technology Prague, Prague (Czech Republic)
  5. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
  6. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Texas A & M Univ., College Station, TX (United States)
  7. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Univ. of Oklahoma, Norman, OK (United States)

Stable isotope probing (SIP) was used to identify microbes stimulated by ethanol addition in microcosms containing two sediments collected from the bioremediation test zone at the US Department of Energy Oak Ridge site, TN, USA. One sample was highly bioreduced with ethanol while another was less reduced. Microcosms with the respective sediments were amended with 13C labeled ethanol and incubated for 7 days for SIP. Ethanol was rapidly converted to acetate within 24 h accompanied with the reduction of nitrate and sulfate. The accumulation of acetate persisted beyond the 7 d period. Aqueous U did not decline in the microcosm with the reduced sediment due to desorption of U but continuously declined in the less reduced sample. Microbial growth and concomitant 13C-DNA production was detected when ethanol was exhausted and abundant acetate had accumulated in both microcosms. This coincided with U(VI) reduction in the less reduced sample. 13C originating from ethanol was ultimately utilized for growth, either directly or indirectly, by the dominant microbial community members within 7 days of incubation. The microbial community was comprised predominantly of known denitrifiers, sulfate-reducing bacteria and iron (III) reducing bacteria including Desulfovibrio, Sphingomonas, Ferribacterium, Rhodanobacter, Geothrix, Thiobacillus and others, including the known U(VI)-reducing bacteria Acidovorax, Anaeromyxobacter, Desulfovibrio, Geobacter and Desulfosporosinus. As a result, the findings suggest that ethanol biostimulates the U(VI)-reducing microbial community by first serving as an electron donor for nitrate, sulfate, iron (III) and U(VI) reduction, and acetate which then functions as electron donor for U(VI) reduction and carbon source for microbial growth.

Research Organization:
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Organization:
USDOE
DOE Contract Number:
AC05-00OR22725
OSTI ID:
1333651
Journal Information:
Frontiers of Environmental Science & Engineering, Journal Name: Frontiers of Environmental Science & Engineering Journal Issue: 3 Vol. 9; ISSN 2095-2201
Publisher:
Springer - Higher Education Press
Country of Publication:
United States
Language:
English

References (34)

A Nested-Cell Approach for In Situ Remediation journal March 2006
Humic substances as electron acceptors for microbial respiration journal August 1996
Microbial reduction of uranium journal April 1991
In Situ Bioreduction of Technetium and Uranium in a Nitrate-Contaminated Aquifer journal January 2004
Biogeochemical Processes In Ethanol Stimulated Uranium-contaminated Subsurface Sediments journal June 2008
Effects of Nitrate on the Stability of Uranium in a Bioreduced Region of the Subsurface journal July 2010
Stable isotope probing in the metagenomics era: A bridge towards improved bioremediation journal March 2013
Unlocking the ‘microbial black box’ using RNA-based stable isotope probing technologies journal February 2006
Enzymatic iron and uranium reduction by sulfate-reducing bacteria journal July 1993
The Genome Sequence of the Obligately Chemolithoautotrophic, Facultatively Anaerobic Bacterium Thiobacillus denitrificans journal February 2006
Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III) journal May 2003
Uranium(VI) Reduction by Anaeromyxobacter dehalogenans Strain 2CP-C journal May 2006
13C-Labelling of lipids to investigate microbial communities in the environment journal February 2006
Surge block method for controlling well clogging and sampling sediment during bioremediation journal November 2013
Enzymatic U(VI) reduction by Desulfosporosinus species journal January 2004
Ferribacterium limneticum , gen. nov., sp. nov., an Fe(III)-reducing microorganism isolated from mining-impacted freshwater lake sediments journal February 1999
Biphenyl-utilizing bacteria and their functional genes in a pine root zone contaminated with polychlorinated biphenyls (PCBs) journal May 2007
Reduction of Uranium(VI) by Mixed Iron(II)/Iron(III) Hydroxide (Green Rust):  Formation of UO 2 Nanoparticles journal February 2003
Microbial Communities in Contaminated Sediments, Associated with Bioremediation of Uranium to Submicromolar Levels journal May 2008
Stimulating the In Situ Activity of Geobacter Species To Remove Uranium from the Groundwater of a Uranium-Contaminated Aquifer journal October 2003
Pilot-Scale in Situ Bioremediation of Uranium in a Highly Contaminated Aquifer. 1. Conditioning of a Treatment Zone journal June 2006
Extraction of Oxidized and Reduced Forms of Uranium from Contaminated Soils:  Effects of Carbonate Concentration and pH journal June 2005
Changes in bacterial community structure correlate with initial operating conditions of a field-scale denitrifying fluidized bed reactor journal November 2005
Ecological consequences of the phylogenetic and physiological diversities of acetogens journal December 2002
Geothrix fermentans gen. nov., sp. nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer journal October 1999
Pilot-Scale in Situ Bioremedation of Uranium in a Highly Contaminated Aquifer. 2. Reduction of U(VI) and Geochemical Control of U(VI) Bioavailability journal June 2006
New Screening Software Shows that Most Recent Large 16S rRNA Gene Clone Libraries Contain Chimeras journal September 2006
The Acetate Switch journal March 2005
In - Situ Evidence for Uranium Immobilization and Remobilization journal April 2002
In Situ Bioreduction of Uranium (VI) to Submicromolar Levels and Reoxidation by Dissolved Oxygen journal August 2007
At Least 1 in 20 16S rRNA Sequence Records Currently Held in Public Repositories Is Estimated To Contain Substantial Anomalies journal December 2005
Desulfovibrio putealis sp. nov., a novel sulfate-reducing bacterium isolated from a deep subsurface aquifer journal January 2005
Bacterial community succession during in situ uranium bioremediation: spatial similarities along controlled flow paths journal September 2008
Stable-isotope probing of DNA: insights into the function of uncultivated microorganisms from isotopically labeled metagenomes journal February 2006

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